XLOC_029498 (gene) - C. hemisphaerica

Overview
NameXLOC_029498
Unique NameXLOC_029498
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_106:413931..419914-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029498 ID=XLOC_029498|Name=XLOC_029498|organism=Clytia hemisphaerica|type=gene|length=5984bp|location=Sequence derived from alignment at scaffold_106:413931..419914- (Clytia hemisphaerica)
CTGACAACTGACTTTAATTTAAAAGAGGTCTAAAAGTGGTATATTCCCAG
GAGGAAAATGAGTATGTTAGACGATAAAAAGAGATCACCAAAATGTGCAC
GATGCAGGAACCATGGATTCGATTCTTCATTGAAAGGCCATAAAGGATAT
TGTCGATGGAGAGATTGTATGTGCCCGAAATGTGTACTCATTGTTGAACG
CCAACGGGTCTTAGCGGCGCAAGTTGCGTTACGCAGACAACAAATGCAAG
AGAGTAAACAAAGACCAGGCCCATTACCAAGAGGAGATGGATTTTCAACT
AAAACCCAATTATCACCTAATGAAGCATTACAACGCACAAAAGAAAATGA
AATTAAAGGTAATGAAATTTTTAATTTTTCAAAGTTTAAAATTTAATACA
GTCAAGCAATATATCTCGGTGGTATGGTGATACCACTCAAGCTTCTAAAA
ACAAAAACTTTAACAATAATTAATTTCAAATTTAATTTTAATTTTTCATT
TCGATAGTTGTGAAAATACCTTGAAAGTGTTACATTTTACAAAACGTGTG
CTGAAGCTCTGCCGTTACGCATCTAATGCAATATGTTGGGAGGCATTTTG
AAACTGGGGCTACTGGTGATCATTAAGGGATATCGAGCAAACATACATAC
ACTGTGTAAACATGATTTCTTATCAAATTTATCATCGGGTTAAATCAATT
TTTGTATGTTCTGGCTGCTGAGCTTTTTAAAGGCTCTTCATATATATGTT
AATTTTTTTAAATTCTGACTTTGATCAAAGAATATTTCGGCGCGGTCTTT
TTCCTACGATTGGGCGAACTCGATACAAATTTCCCTATCACGCAAACTAC
CGCAAACAAATAGAACATCTGGCTCATCACTATTAGAATATTGAGAACAC
GTAGCAAAAATAAAATATACGAGAAATGTATATAAAAATATTTTTGTAAC
GAAAGACAAAAGCAAGGATAGGCCCCCGTGCAGTGAAAAAACGTAACAGC
CGTTAGACGGGTTTTGTTGACAAAATAGTTTTCAAAAAGATGGAAGATGG
TAAATTATATCGAAAATTTTGTATTTTGTTTCAAAAAAAAAAGAAGAAGA
TATTTTTACAAAATTTCCTTCAAGATGTTCACTGAGTAACTCAAAACAAT
GAAAAAATAATAAAAATGAGGGGAAATAGAAACATCTAACAAAACAATTA
CTTTTTTATGACTTCATTTCAATGTAGGCACAGCATGATTTATCAAACTT
TTTCCAACGTTTATTTAATTTCTTTTTCTGGCTCCCCCCTGACAGCGTAC
TAGAAAATAAATAGGGTGCAATATGTGCCATATTTGATGAAAATAACTCG
CAAACGTTTTGTTTCAATATTGTAACAACAGTTTTTTTGTCAAAAAGGCA
CCCTATTGTGATGACGAGTCATGTTGATAAAAATATTCCTTTTCATTATT
TTAGTGGAGAACATTGAGAACAAACCAAGTGTTGTGTCGCCAGGGCCTGA
GCACAAACCAAAGTCACCCAATATCAAAGAATTTAAAGAAAAATTACCAA
AGATGACAGGTACGTTGCCCCTCCCAAAAGATTAATCAATTAAAGTCGCC
TATTGTTTTTAGCTTTGTATTGTTCTTGTAAAGGTTCGAATGAAAGAAAC
GGTACAATATACAATAACTATTTAAAAGTTATCTTAGTATCTTTTTTTCT
TGAATCCCCTGTTGTTTTTCTTTTTTGCTTCGTGTTTCAAAGTGAAGCTA
CCTGACCAGATGTGAACATATGCTTCAAATAATTTGCCATTGTTTTCTCC
CTTCTTCACTTAACCCTTCCTTTGTTTCTTTTGCCCAATTGGACATCTGA
GGAGTAGGTTAATCGATATTTGAATATGTTTTATCCAGATTATCTCTCCA
CAAAGTCAAATTTGTTTAAACAAATTTGTTTCGATCTGTCAATGTTTCAT
TTTATTATATTTCTATCTCTTATCNCCCAATTATCACCTAATGAAGCATT
ACAACGCACAAAAGAAAATGAAATTAAAGGTAATGAAATTTTTAATTTTT
CAAAGTTTAAAATTTAATACAGTCAAGCAATATATCTCGGTGGTATGGTG
ATACCACTCAAGCTTCTAAAAACAAAAACTTTAACAATAATTAATTTCAA
ATTTAATTTTAATTTTTCATTTCGATAGTTGTGAAAATACCTTGAAAGTG
TTACATTTTACAAAACGTGTGCTGAAGCTCTGCCGTTACGCATCTAATGC
AATATGTTGGGAGGCATTTTGAAACTGGGGCTACTGGTGATCATTAAGGG
ATATCGAGCAAACATACATACACTGTGTAAACATGATTTCTTATCAAATT
TATCATCGGGTTAAATCAATTTTTGTATGTTCTGGCTGCTGAGCTTTTTA
AAGGCTCTTCATATATATGTTAATTTTTTTAAATTCTGACTTTGATCAAA
GAATATTTCGGCGCGGTCTTTTTCCTACGATTGGGCGAACTCGATACAAA
TTTCCCTATCACGCAAACTACCGCAAACAAATAGAACATCTGGCTCATCA
CTATTAGAATATTGAGAACACGTAGCAAAAATAAAATATACGAGAAATGT
ATATAAAAATATTTTTGTAACGAAAGACAAAAGCAAGGATAGGCCCCCGT
GCAGTGAAAAAACGTAACAGCCGTTAGACGGGTTTTGTTGACAAAATAGT
TTTCAAAAAGATGGAAGATGGTAAATTATATCGAAAATTTTGTATTTTGT
TTCAAAAAAAAAAGAAGAAGATATTTTTACAAAATTTCCTTCAAGATGTT
CACTGAGTAACTCAAAACAATGAAAAAATAATAAAAATGAGGGGAAATAG
AAACATCTAACAAAACAATTACTTTTTTATGACTTCATTTCAATGTAGGC
ACAGCATGATTTATCAAACTTTTTCCAACGTTTATTTAATTTCTTTTTCT
GGCTCCCCCCTGACAGCGTACTAGAAAATAAATAGGGTGCAATATGTGCC
ATATTTGATGAAAATAACTCGCAAACGTTTTGTTTCAATATTGTAACAAC
AGTTTTTTTGTCAAAAAGGCACCCTATTGTGATGACGAGTCATGTTGATA
AAAATATTCCTTTTCATTATTTTAGTGGAGAACATTGAGAACAAACCAAG
TGTTGTGTCGCCAGGGCCTGAGCACAAACCAAAGTCACCCAATATCAAAG
AATTTAAAGAAAAATTACCAAAGATGACAGGTACGTTGCCCCTCCCAAAA
GATTAATCAATTAAAGTCGCCTATTGTTTTTAGCTTTGTATTGTTCTTGT
AAAGGTTCGAATGAAAGAAACGGTACAATATACAATAACTATTTAAAAGT
TATCTTAGTATCTTTTTTTCTTGAATCCCCTGTTGTTTTTCTTTTTTGCT
TCGTGTTTCAAAGTGAAGCTACCTGACCAGATGTGAACATATGCTTCAAA
TAATTTGCCATTGTTTTCTCCCTTCTTCACTTAACCCTTCCTTTGTTTCT
TTTGCCCAATTGGACATCTGAGGAGTAGGTTAATCGATATTTGAATATGT
TTTATCCAGATTATCTCTCCACAAAGTCAAATTTGTTTAAACAAATTTGT
TTCGATCTGTCAATGTTTCATTTTATTATATTTCTATCTCTTATCCTTTT
TTGTTTTGTTTTTCCTTTTGACAGGTCGACCATCAATTCCGTCTCTATCG
CCACACCAAGCTTACTCACCGCCCTTCTATTACAGAAAACCAATATTCTT
CAAGGAACCCCCTTCTGCATTCCAGATGTGGGCACCTCATTTAACCAAAG
GTACTAACAATTGTATTTAAATTTATCCGCAGAGAGTTTTTTGTATCTAA
ATTAGATTCAGAAGTGAATATCGTCGCTCCAAGATAATTTTCGACAACTG
AGACCCCTTAAATATACGTGAAATTGACTTAAATTATTTTTCAAGTCAAG
GCTCTCGCTGATTAACCANGTCAAAAAGGCACCCTATTGTGATGACGAGT
CATGTTGATAAAAATATTCCTTTTCATTATTTTAGTGGAAAATATTGAGA
ACAAACCAAGTGTTGTGTCGCCAGGGCCTGAGCACAAGCCAAAGTCACCC
AATATCAAAGAATTTAAAGAAAAATTACCAAAAATGACAGGTACGTTGCC
CCTCCCAAAAGATTAATCAATTAAAGTCGCCTATTGTTTTTAGCTTTGTA
TTGTTCTTGTAAAGGTTCGAATGAAAGAAACGGTACAATATACAATAACT
ATTTAAAAGTTATCTTAGTATCTTTTTTTCTTGAATCCCCTGTTGTTTTT
CTTTTTTGCTTCGTGTTTCAAAGTGAAGCTACCTGACCAGATGTGAACAT
ATGCTTCAAATAATTTGCCATTGTTTTCTCCCTTCTTCACTTAACCCTTC
CTTTGTTTCTTTTGCCCAATTGGACATCTGAGGAGTAGGTTAATCGATAT
TTGAATATGTTTTATCCAGATTATCTCTCCACAAAGTCAAATTTGTTTAA
ACAAATTTGTTTCGATCTGTCAATGTTTCATTTTATTATATTTCTATCTC
TTATCCTTTTTTGTTTTGTTTTTCCTTTTGACAGGTCGACCATCAATTCC
GTCTCTATCGCCACACCAAGCTTACTCACCGCCCTTCTATTACAGAAAAC
CAATATTCTTCAAGGAACCCCCTTCTGCATTCCAGATGTGGGCACCTCAT
TTAACCAAAGGTACTAACAATTGTATTTAAATTTATCCGCAGAGAGTTTT
TTGTATCTAAATTAGATTCAGAAGTGAATATCGTCGCTCCAAGATAATTT
TCGACAACTGAGACCCCTTAAATATACGTGAAATTGACTTAAATTATTTT
TCAAGTCAAGGCTCTCGCTGATTAACCAACTCTTATGATTCGCATAAATC
AATCAATAACCAATACTATGATCCTAATATTACAGCTCGATTCCACGGCT
CACCTCGTGAAATGCAACGATTCACGCCTTACCCATCACCACCTCCACCC
ACAGTGCCCTCTTCCAGCGAATGTCATAGAGGCGTTGACCGCCCTTGTTA
CATCGATGAATACTGCACTAAGAAATCTTTCGTATATCCTCCACCGGCCA
ACATGCGCCATGAATACATCTCACACTCAAATCCAGTTTTCCAGTCCAAA
ACAAAAGAACCAGTCGATCTAAATAACAACAAGGCGACAACAAAAGGTCC
AAAATCTCCACATTATTCACCAGTTGGTCGAATCTCACCGCAATCAAATA
ACGACCTATCTTCACCTTCATCGTACGGTCGACAGCGATCACCATTCATG
GATCGTCGCTCTCCCTCCTACATTGACCACCACGGTAGATCTCCATACGG
CGAAAGACGATCTCCTATTTATCTAGAGAGACGTTCTCCACCATCCTTCG
ATTCAAAACACTCTCCAATTCCTGACAGATTTACCAAAGAAGGCGCATCG
CCTACACCGGGAGTAACATCACCGAAAGACACTTCTAAAACAGACTCACA
TGCTAATACTCCATCTATCGAAATGCTTGCAAGATTATTCCCACGACATC
AAACAACCACTTTAAAAAACGTCCTAAGCAACTGCAATAATGATCCTGTA
CGTGCAATTGAAGAAATTTTGGACAGAGTGCCAGCTGAAGATAATAACAA
CAACAATAGCATCAATCAAAAACTTCCACCTGTCAAAAACACTTACTCAG
CAAAACGAAATGAACCAATTATTGACAATAAACATGGAAGTAATGACGAT
CTATCAAATCTAGCAAAAGCATTTGATATCCCAGTATCTGAGGAGAAAAT
TAGAAGTCCGAAAGTTGTACACTGGTAACATAAAAAATCCTCTTGTATAA
TAAAATACTGTTCAGCCTGAAATATTATGTATTTTTTTGTCTGTAAATAC
GCAACTCAATTGTAAATGATTAAATTATCAAACTTCTAATTTATGAAAAA
TATAATTTGGCTTCACAAGCTGTATGTAAATAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046195TCONS_00046195Clytia hemisphaericatranscript
TCONS_00046194TCONS_00046194Clytia hemisphaericatranscript
TCONS_00046193TCONS_00046193Clytia hemisphaericatranscript
TCONS_00046192TCONS_00046192Clytia hemisphaericatranscript
TCONS_00046191TCONS_00046191Clytia hemisphaericatranscript
TCONS_00046190TCONS_00046190Clytia hemisphaericatranscript
TCONS_00046189TCONS_00046189Clytia hemisphaericatranscript
TCONS_00046188TCONS_00046188Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046191-proteinTCONS_00046191-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_106supercontigscaffold_106:413931..419914 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.04	0.06	0	0	0	0.19	0	0	0	0	1.04	0.72	0	0	1.82	2.47	1.35	2.68	2.66	2.97	0.61	0.8	1.68	2.49	2.98	4.47	0.15	0.04