XLOC_010892 (gene) - C. hemisphaerica

Overview
NameXLOC_010892
Unique NameXLOC_010892
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000326:161950..169592+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010892 ID=XLOC_010892|Name=XLOC_010892|organism=Clytia hemisphaerica|type=gene|length=7643bp|location=Sequence derived from alignment at sc0000326:161950..169592+ (Clytia hemisphaerica)
tttctctcatgaaaaatctttcttcCTTCATTTAAAATCGTGAACTGTAG
AATATTTGAAATACTAACTCTGATATAcagaatttaaaaagtttttaatt
aaaGAATTATAATGGTATCTAATCTGGTCTTACTATCTTTTGTCCTTACC
CTCATGCATGATTGTCATAGTTTACCGGTACAACATCAGAAAGGTAGGCT
CATTTTGCTTTCTACCTCATTTATACATTTTATTAACCATTTGCTTCAGC
TTGCACTAAAGATTGTTTTGCTTGTCCTTGTTaaatccccttctcacaga
cccggcaggattttttcaaccagtagggataaaaataacggactcaCTGA
agctcgatggggattgatattcccttATTTTTCAGAGGgtattgatttct
tttgttttcaattcagtggggatgggaaatgTAGTGCAATATCTTACCAG
GGATgatattttttgccaatttttccagtggtgaGAAGGGGTGTCTTGTT
CAGTCAATGCTTCAATGCTTCATTTCTAACAAATTACTCAttccgttgaa
aagataattcagaggaccatattttttgcaaaaaaatattctaataattt
tagaaaatgaagatgaaaagggaagaaaaaaatgaactttttcttccttt
tagtGCTAGACACTCCGTTTTTTTGTACAGAGATTCTTTAAAGCCTCGTG
ATTTCAGCTACCAGTGAATACCCCTTAAAATCACACCCCTTAATACCTGC
AAAGTTGGGTTTTGGGCTCTCTTAaccaccaaatttaatttaatattgta
taattcacttttttaagtCTCTAATATggtactttcataaaataccttat
ttcaagaattttaattatcGTAAAGTGTTGTAAAAttcgaaattattaaa
aattatcaaaaatcccttcaaaaaatcattttttttggacctagagatta
cacaaatgaatttaaggtcataaaacctatactttttaggtacctatact
tatggtaggtacAAAAAAATCGTTTTCTTCTCCATGGTTACACCCCAAAG
AAATCGTAACGCCctcaaagttttattttaaagctcatttatgATAGTGG
CCTATTAAATCTGAAGATCGCATATCGCATAATCGCATGatattgcatac
caaaatgtcacaaatttaaaatacattaaaaatgaagcgaataaaagttt
tgacccttcaaaaccgttttttgacaaataaaCAGGCGCAATTGCAttat
gaaatcctgaaaaatacaaatatagttttggaaatggatttctagcaagt
atttgatcaattgaatcacggTTCAGCACCTGAGTTGCAATTTTACAGTT
TCAGTTGTGAGCAAGGGGTCAATGTTTGTAAGTTTTAAGGTGCATTAGTG
TAGAttttaaggtgtaatttgattttaacgtacagttttgaaaCTTAATT
GTAGCCTTAGTAACTTTACAGTGAATCActattcaaaatttgagaccaaa
aggactattttataaaaagttattcaaaaaaaccATTtggtaggttttaa
ggggtaaatcgctaaaattgcattttttcaccgatcaataaaaattttct
tagcaaCTTTTACAAAATAACATACCCAGGGAAGAAATTCATAGGTAGCC
TAGACTCGCTAGAAAAGGTTTCAGCCCTTACTGTTTTCTCTATCAGGATA
TAGGGATAGAGATttttttgttgtaggttttaaaGGTATCTTCCCTTTAA
GATAGGTTACAGCCTCTAAGAGGTAGCTcgttgaaaaaacatttttttac
tcCATTGGGAAACCTTCTAAGCAATAATTTAATGTAAAAAATTAAATCAG
AAGGCTTCAAAgtacctttgtaccaaaaaagGAGTTTCTGGCACTAAAGT
ATGCtcgaaaagataaaaatttcatatttttcttcttcaattttcatctt
catttttttttaatttttggaaagtttttctcaaaaattatagtgtgtgt
gtgtgtgtgtggtaTATTGTAGGGTGTAAGGTTAGCCAGGCCAATTTCTT
TCCACTTGGTTTGGTAATCCTCGTCTGAGTGGATCTGACCGGTttactga
tacaggggtgtgtcTGTACTttactgatacaggggtgtgtcTGTACTGTG
AAAGTCGAATATGGATTTTACAccactgtgtcacagacccaccaGGGCCC
CagtcagccccactggaaaatttgccaaaaaatttcGTCCCTACTAGGAA
ATCGagtttgatttcatccccattcgaaattcaatgattgaaaattgcac
ttcaaaaccattcccactggatCTTTTAATCTTTGAgtaatagaattttt
atccctattGAGATTCAAAAGAATTGATCACTGCTGttagaaaaagtttc
accggggctgtgaggcaggggtgtagtTACGTATATGTGTGAGTTTTTGG
CACGAATCTTTCCTATTTCGAAAAGTCCtactttgaagatttttctcATT
TCGTCCCATAGGCTTTgtgtaagtttgaaaaaaaaatcaaaagagaaTCT
ATAATTAAGATTAAGAATACGAAAAGTATCaccttttttgtttatttaac
tAGCTAATATACATATAAGTTACACCTCCTTCTTCTGCTTAGCAAAAAAT
TGGCTAGATATATTCATAAAcacatttttatataagaacatacaaaattt
ttgaagccttcggatgttcctagctttttatgttttaaagcctgaaatgt
gttttacccatttttctaagaaatttggCGTTTTCGAGTCAATAAAGCCT
TGAAATAATgtaaacttgttcttagcattttggccgtTGATGTCTTATGA
TCTTATatatccccgggggggggggggggNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggggggggggggggcag
ctgagcaaaatgaccgacgggtatgtgcaggccctaagggtaccttttca
aagatgttttaaatgcactgtaagggtcggaaaaactagagatgcactgt
aagggtagaaatttcagaaaattctgaaaatctaGATATTTGGCCCAAAA
ATGGAAGAATTTTGACAGTTCTTTGCACGAAAAGGGTTGAACATTTGGGG
AAAAATGCAATTTAAGGTTATAATTTTCACCGACTTTTGcagcactgtaa
gggtgcaattttaaaagcccattcttggcccgcacataccgtcagtctgC
AAGCCCAGTCCCTCCCCCGGGTATATAGccttttcctataaaaaatgtgt
aagacAAGGATTTGATGAAGCACGAGTTTGTATATTCAATTTTAGAGGCT
TGTCGATTTCTCAGAACATGTGATTACTTCAAAAGTGcatcaaaatgcta
aaaaaatactgaaaaaacgGAAATACACCATTTATAAGGGCCTTTAAAAC
TTGAAACATACAAGCTTTTGAACACCCAAAAACCCAAAAGCctcaaaggt
ttttaaaaatcttataataaaaaaagattggaaTGAAAATCTACAATGTT
ACTAATCATATCTTAACTGTGACCAATTGATGGGGCAAATAGCAAGTAAA
CATGAAACCCCAAGCTTTTGGAGGTGTGAAAAAAGCTCATAATTAACATT
ACAAAATATGTtactttttgaaatctacacgtttttataagaacataaga
tgGGCAAAATGTTATAAACttgttaagaacattgtaaggctTCGCGAACT
TTAAAATACCCAGTTTTTGAGGAAAATAGACAAGGATACTCAAATAATGG
CGacaataagaacaatttaaggactaagaacattcgaaggcttcaaatat
tttagatgttattttttaaaaacttgtATGGCTAAGTTTACATTAAGATT
GTTTTCCAAAACAGTAGTGATTTGCTTTCACAGCGTGAATTAAGATCTTT
GATAATTGTAAACGGTACTATATAAGACCACTGTCACAAGACCCGGTGGG
CCCcaccccactgaaaaatttcgACATTTCAACATCTTgggaaaatagcc
aaaatttcAACACCACTTGGAAATTAACTTCGATTTCGTTTCGATTTGGA
ATCCAatgtaaaaaaataacaaacaaacaaagtaaCAAATTTAGTTTCTC
CTGATCAAGGAAAACCCATTTTGCGGATACCAGGAGAACTAATACAATTG
TATATTGTatacttgtaaaaaaaaaattgtcagtcAAATTTTTCACATGG
CGGAAAAAAGACccatatataatattttcataaaaaacatcCACATTTTT
TAAGACTTCAAGAAAATGCAGGTTTTTTAGAGTCTGAAAAGTATtcagaa
aatcttattttcaaattaaaaaatcgtTCATATTCTAGACAGGTTATACT
GTTTGAGAATTCGACACCAATATAACAGGATATATGAAAGGTGTTTAGAA
TAATTATGCGAAAAGTTATGATATAATTTCATACTTTTTTGAGAAGTtga
ttaattttcgattttgcCTGATCAAATTTACAGAAAGCAATCAAAAAAGA
ATTATGGAAATAAGTCCTAATGTAGTTACTTTTGATGTAATCATCTGAAT
GTCGAAAAATCTTCTATGGGCGTATTTTCCCGTGAGTATCACAGTATATG
AATAGTACATGCCAAGCTGCATTTAACACGCACTTAGAAATTTCTTTCGA
TTCCTTGGATAATAATTTGATTGAGACATGCGCAATAAAATTCTTACATT
ATGTCTCTGCAGCTTAATTTTAGAGAAAGCTAAGCTATGATGTTTACGAC
CAGGCGTATTCAGCTTTTTGGTCTTTaagtttaaaggttttcttaaaata
tttttgtcgtCAGCAATTTAAGAAGCCATTTGATTtaagtttctgaaaaa
ttgtATGTTCTAGAACCCAGACAAAGCTCTTATGTtcaaagtttgttctt
aaataTCTAGCTGTGACTGAAAacgtttttaaacaaaaaatgtcattcaa
ttataaattgacaCACATTGGGTAATGTTACcgttagggtaccactttca
taAAATATCCGATCGATAGTAGTGGATATAGCTTGATTTAGGGTTTATAA
AGTTCAATGGTGCAGGTCCCAATGAGTCACGGGTAACAAAGGAATTTATG
AAGGGACGGAAGAATGATTAGTAGACTCCCTTTGTTTAACACCTGCTTAC
AGACTCGTATATACAAAAGtgataaattattttaagaCTTTATGAAATTA
GAATAAGTTTCATTTTCAATGGCAAATTAGTGAGTTTAGTATTACTATGT
TAAGAACCAATAAACTGAAGCAATTCTTATTCAAAATgttatgaaatttt
caccagcGTGCTAAATTTTGAGACCTTGTTAGACAGTATAAAAGTTTTGG
AGTCAATGAGAAcctaaatatttttactttagtggAAGAGAAAACAACTG
CAAATCCATTGAACTTAAAATTGAACTAATTGTGGTAATCGCACGCATTC
TGCTGAAAATAGTTTCATTTATTGAGTTGATCGAGTAGTTATTAAGTTCA
ATAGAAAACATGGCTAAATTGACTGGGTTAACTTGTTTGGTTGTTATTGc
tgcatttgttttgaaatgcaGTACTTCTCCTGTTCCCAAAGGTACGATAT
TTAAAGTATTGGGGTAGAATTAACTTGGGCTAAAATTGTTCAAGAGGAGT
TGGGCTAGTGTTGAAAGATTCACCACAGCCTAGTTACAAACAGATCTCAA
TAAACATGTTGCTCCAAATAGAACCCCGGTTTGTAGGAATTATCTCTTAA
TAGTGAAGAACTAGGTGCTCGGCAACCCAAAATTGGATAGAAAATTTATC
tcttttttttcggaaatacCCTCGGTTGAtggggaaaaaaagaaaatgaa
gagatcaatcaacattaaaaataatctCATAAACATTATAAAGAATTAAT
ATAAAAGAATTATAGAGAACATCATTTTTGGTGCACCTATATTTTCGGGT
CCAGATAGTGTAAAAGTAACCAGATAAGCTACCccaattatgaaaatttt
tatttgacaaCTCCAATATTCTTTAACTTCCAATCTCAAATTCTCTTAAA
TCTTGCGAGCACTAATTTATTACTAAGTTATTCAGCATATGCAACCTTGC
AAGGTCATCTCGAATTGCGTCCAGCGTGGTGGATTGACCAAAATTCGGAC
AAACTGGGAAAGGAATTTTTAGATTTGATTCCAGCCTCCCCTTTTAAAGA
AAGTAAATACATTTGTAAAATTTAGACGGGCGAAGGGAGCATAAAAGCTT
TTGGgaattctctctttttggccgaAATCTGCCAATTCCTCTAGTAATCA
GAGGCCTCATTTCTCTTTTACATTTGAACAAGTGCAGAAGCACGAAACTT
TACGTTATGTACTGAATTATCGAAAGacaacttttaaattttacttgGCT
CTGGAACGAGTTGAAAAAAGAAACAACAGAAACTTGAAAATCAGAAATAG
ACACTTACATAATTTTGTTGAGTTTTTGCAGTGTGACTATTGTCAACTAA
CAGTAACTCAGCCAAATTCTTATTATattagttttttacttttttccagA
TCTATACAAAGGTGAAGCGATCTCCAAAAGGCAAAACATAATGCGTTGGG
GAGATGGAAATTTTGCAGTTGGAAAGAAGGAAGTTCCCGCAAACGgaaaa
gaaatttccaaaaggcAGAACATAATGCGTTGGGGAAACGGAAATTTTGC
AGTTGGAAAGAAAGAAGTTCCCGCAAACGgaaaagaaatttccaaaaggc
AGAACATAATGCGTTGGGGAAATGGAAATTTTGCAGTTGGAAAGAAAGAA
GTTCCCAGAAACGgaaaagaaatttccaaaagacaAGACATAATTCGTTG
GGGAACCGGAAATTTTGCAGTTGGAAAGAAAGAAGTTCCCGCAAACGgaa
aagaaatttccaaaaggcAGGACATAATTCGTTGGGGAACCGGAAATTTT
GCAGTTGGAAAGAAAGAAGTTCCCAAAAAGCAGTAGACaaacttatttta
aattttcaattttaagaaCAAAGGCTGATAGAGTCAAATGTTTGAATTGA
ATCTCACATCCACAGGAAATTGCCTTTAATGGGGAGCGGTTGTAGGGGTT
CCTGTCAAGAATTTTGCTAAATCCCGGAAttctgaaaatcgaaaaaaatc
aaaaaataataacaccatCACACCGGTATGTAaaggctaaataccgtcac
cgtctgattctTTCAGTCCTTTGACTGCAGCTCCCCAAATATATAGGTCA
GCATTCTTTGCAATTCCTAGTtatcccagctggtacacaacgttgtttta
acgtttgtctaacgtccacaacgtccatttaacgttagacgaatgttgaa
acaacgttgtgtaccagctgggattTGAGATTTAAAATTTCGAAGGTCTT
TAAATTATTTAATTTGCAAGATTATAGATTGTGAGCGTAAATTTGCTAAA
TATAATTTAAAATCAAAGTTTGTTCTCCAATAAATTGTTCACTTCACTCA
TGTGAAATTTGTTAATATGCAGGCCCagtggaacaaccgtaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019376TCONS_00019376Clytia hemisphaericatranscript
TCONS_00019377TCONS_00019377Clytia hemisphaericatranscript
TCONS_00019378TCONS_00019378Clytia hemisphaericatranscript
TCONS_00019379TCONS_00019379Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019378-proteinTCONS_00019378-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000326supercontigsc0000326:161950..169592 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.1	4.12	6.6	119.55	119.03	184.96	113.69	111.53	155.84	38.48	25.44	0.11	0.14	9.92	12.83	129.66	142.09	57.15	56.82	23.75	30.93	30.51	32.28	0.22	0.19	0.93	1.3