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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019379 ID=TCONS_00019379|Name=TCONS_00019379|organism=Clytia hemisphaerica|type=transcript|length=1144bp
TTCTTATTCAAAATgttatgaaattttcaccagcGTGCTAAATTTTGAGA
CCTTGTTAGACAGTATAAAAGTTTTGGAGTCAATGAGAAcctaaatattt
ttactttagtggAAGAGAAAACAACTGCAAATCCATTGAACTTAAAATTG
AACTAATTGTGGTAATCGCACGCATTCTGCTGAAAATAGTTTCATTTATT
GAGTTGATCGAGTAGTTATTAAGTTCAATAGAAAACATGGCTAAATTGAC
TGGGTTAACTTGTTTGGTTGTTATTGctgcatttgttttgaaatgcaGTA
CTTCTCCTGTTCCCAAAGATCTATACAAAGGTGAAGCGATCTCCAAAAGg
cAGAACATAATGCGTTGGGGAAATGGAAATTTTGCAGTTGGAAAGAAAGA
AGTTCCCAGAAACGgaaaagaaatttccaaaagacaAGACATAATTCGTT
GGGGAACCGGAAATTTTGCAGTTGGAAAGAAAGAAGTTCCCGCAAACGga
aaagaaatttccaaaaggcAGGACATAATTCGTTGGGGAACCGGAAATTT
TGCAGTTGGAAAGAAAGAAGTTCCCAAAAAGCAGTAGACaaacttatttt
aaattttcaattttaagaaCAAAGGCTGATAGAGTCAAATGTTTGAATTG
AATCTCACATCCACAGGAAATTGCCTTTAATGGGGAGCGGTTGTAGGGGT
TCCTGTCAAGAATTTTGCTAAATCCCGGAAttctgaaaatcgaaaaaaat
caaaaaataataacaccatCACACCGGTATGTAaaggctaaataccgtca
ccgtctgattctTTCAGTCCTTTGACTGCAGCTCCCCAAATATATAGGTC
AGCATTCTTTGCAATTCCTAGTtatcccagctggtacacaacgttgtttt
aacgtttgtctaacgtccacaacgtccatttaacgttagacgaatgttga
aacaacgttgtgtaccagctgggattTGAGATTTAAAATTTCGAAGGTCT
TTAAATTATTTAATTTGCAAGATTATAGATTGTGAGCGTAAATTTGCTAA
ATATAATTTAAAATCAAAGTTTGTTCTCCAATAAATTGTTCACTTCACTC
ATGTGAAATTTGTTAATATGCAGGCCCagtggaacaaccgtaaa Run BLAST on NCBI transcript from alignment at sc0000326:167323..169592+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019379 ID=TCONS_00019379|Name=TCONS_00019379|organism=Clytia hemisphaerica|type=transcript|length=2270bp|location=Sequence derived from alignment at sc0000326:167323..169592+ (Clytia hemisphaerica)
TTCTTATTCAAAATgttatgaaattttcaccagcGTGCTAAATTTTGAGA
CCTTGTTAGACAGTATAAAAGTTTTGGAGTCAATGAGAAcctaaatattt
ttactttagtggAAGAGAAAACAACTGCAAATCCATTGAACTTAAAATTG
AACTAATTGTGGTAATCGCACGCATTCTGCTGAAAATAGTTTCATTTATT
GAGTTGATCGAGTAGTTATTAAGTTCAATAGAAAACATGGCTAAATTGAC
TGGGTTAACTTGTTTGGTTGTTATTGctgcatttgttttgaaatgcaGTA
CTTCTCCTGTTCCCAAAGGTACGATATTTAAAGTATTGGGGTAGAATTAA
CTTGGGCTAAAATTGTTCAAGAGGAGTTGGGCTAGTGTTGAAAGATTCAC
CACAGCCTAGTTACAAACAGATCTCAATAAACATGTTGCTCCAAATAGAA
CCCCGGTTTGTAGGAATTATCTCTTAATAGTGAAGAACTAGGTGCTCGGC
AACCCAAAATTGGATAGAAAATTTATCtcttttttttcggaaatacCCTC
GGTTGAtggggaaaaaaagaaaatgaagagatcaatcaacattaaaaata
atctCATAAACATTATAAAGAATTAATATAAAAGAATTATAGAGAACATC
ATTTTTGGTGCACCTATATTTTCGGGTCCAGATAGTGTAAAAGTAACCAG
ATAAGCTACCccaattatgaaaatttttatttgacaaCTCCAATATTCTT
TAACTTCCAATCTCAAATTCTCTTAAATCTTGCGAGCACTAATTTATTAC
TAAGTTATTCAGCATATGCAACCTTGCAAGGTCATCTCGAATTGCGTCCA
GCGTGGTGGATTGACCAAAATTCGGACAAACTGGGAAAGGAATTTTTAGA
TTTGATTCCAGCCTCCCCTTTTAAAGAAAGTAAATACATTTGTAAAATTT
AGACGGGCGAAGGGAGCATAAAAGCTTTTGGgaattctctctttttggcc
gaAATCTGCCAATTCCTCTAGTAATCAGAGGCCTCATTTCTCTTTTACAT
TTGAACAAGTGCAGAAGCACGAAACTTTACGTTATGTACTGAATTATCGA
AAGacaacttttaaattttacttgGCTCTGGAACGAGTTGAAAAAAGAAA
CAACAGAAACTTGAAAATCAGAAATAGACACTTACATAATTTTGTTGAGT
TTTTGCAGTGTGACTATTGTCAACTAACAGTAACTCAGCCAAATTCTTAT
TATattagttttttacttttttccagATCTATACAAAGGTGAAGCGATCT
CCAAAAGGCAAAACATAATGCGTTGGGGAGATGGAAATTTTGCAGTTGGA
AAGAAGGAAGTTCCCGCAAACGgaaaagaaatttccaaaaggcAGAACAT
AATGCGTTGGGGAAACGGAAATTTTGCAGTTGGAAAGAAAGAAGTTCCCG
CAAACGgaaaagaaatttccaaaaggcAGAACATAATGCGTTGGGGAAAT
GGAAATTTTGCAGTTGGAAAGAAAGAAGTTCCCAGAAACGgaaaagaaat
ttccaaaagacaAGACATAATTCGTTGGGGAACCGGAAATTTTGCAGTTG
GAAAGAAAGAAGTTCCCGCAAACGgaaaagaaatttccaaaaggcAGGAC
ATAATTCGTTGGGGAACCGGAAATTTTGCAGTTGGAAAGAAAGAAGTTCC
CAAAAAGCAGTAGACaaacttattttaaattttcaattttaagaaCAAAG
GCTGATAGAGTCAAATGTTTGAATTGAATCTCACATCCACAGGAAATTGC
CTTTAATGGGGAGCGGTTGTAGGGGTTCCTGTCAAGAATTTTGCTAAATC
CCGGAAttctgaaaatcgaaaaaaatcaaaaaataataacaccatCACAC
CGGTATGTAaaggctaaataccgtcaccgtctgattctTTCAGTCCTTTG
ACTGCAGCTCCCCAAATATATAGGTCAGCATTCTTTGCAATTCCTAGTta
tcccagctggtacacaacgttgttttaacgtttgtctaacgtccacaacg
tccatttaacgttagacgaatgttgaaacaacgttgtgtaccagctggga
ttTGAGATTTAAAATTTCGAAGGTCTTTAAATTATTTAATTTGCAAGATT
ATAGATTGTGAGCGTAAATTTGCTAAATATAATTTAAAATCAAAGTTTGT
TCTCCAATAAATTGTTCACTTCACTCATGTGAAATTTGTTAATATGCAGG
CCCagtggaacaaccgtaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019379-exon-sc0000326-1491911889:167323..167640 | TCONS_00019379-exon-sc0000326-1491911889:167323..167640 | Clytia hemisphaerica | exon |
| TCONS_00019379-exon-sc0000326-1510915933:167323..167640 | TCONS_00019379-exon-sc0000326-1510915933:167323..167640 | Clytia hemisphaerica | exon |
| TCONS_00019379-exon-sc0000326-1575043694:167323..167640 | TCONS_00019379-exon-sc0000326-1575043694:167323..167640 | Clytia hemisphaerica | exon |
| TCONS_00019379-exon-sc0000326-1491911889:168599..168629 | TCONS_00019379-exon-sc0000326-1491911889:168599..168629 | Clytia hemisphaerica | exon |
| TCONS_00019379-exon-sc0000326-1510915933:168599..168629 | TCONS_00019379-exon-sc0000326-1510915933:168599..168629 | Clytia hemisphaerica | exon |
| TCONS_00019379-exon-sc0000326-1575043694:168599..168629 | TCONS_00019379-exon-sc0000326-1575043694:168599..168629 | Clytia hemisphaerica | exon |
| TCONS_00019379-exon-sc0000326-1491911889:168798..169592 | TCONS_00019379-exon-sc0000326-1491911889:168798..169592 | Clytia hemisphaerica | exon |
| TCONS_00019379-exon-sc0000326-1510915933:168798..169592 | TCONS_00019379-exon-sc0000326-1510915933:168798..169592 | Clytia hemisphaerica | exon |
| TCONS_00019379-exon-sc0000326-1575043694:168798..169592 | TCONS_00019379-exon-sc0000326-1575043694:168798..169592 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000326 | supercontig | sc0000326:167323..169592 + |
Blast
The following BLAST results are available for this feature:
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