XLOC_010644 (gene) - C. hemisphaerica

Overview
NameXLOC_010644
Unique NameXLOC_010644
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000314:97099..102025-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010644 ID=XLOC_010644|Name=XLOC_010644|organism=Clytia hemisphaerica|type=gene|length=4927bp|location=Sequence derived from alignment at sc0000314:97099..102025- (Clytia hemisphaerica)
TTTGTTCCAGATCACATTTTATTCAAGCACGTGTAATAATAATGATCATC TTTTCTCCATTTCTTTACAGAAGAACGAAAAAGTATGTAAAGTAGATGAA AATATAATAAACATAAGAAAAACATACATCATGGTGGAAGAAATGGAACA GGCATTGAAGGAAATTTTGCCCTTTTTGAAATGGCATTCACCTTTAGAAT ACAAGAAAGAAGTATTGCAGCATTTATTGGGAATGACTGGAACCTCTGAG GGATGTTCACGACTCTCCAAGCATCTGCTGGTCAACACAACGTTGAAGGA CTTGGTCATTTGCGATAGAATTCACGAAATACAAGAAGGTACCACACAAG ATGGTCTTACTACCTTTGAGTTGATTAATTTTCGTGTGCATTTTTGTTTT CGTGAATCGAGAAAGGAAAACCTTTGCACGGACAAAATCTGCCTATTTTT CACCCAATTTATTTTAAGGCACCCTGTATTGTTCAAACCCTCAGTTGTCC TCATAACGCAAATGAGATCGTAAGATCGATAAGTTATGTCTGTTGAGTTT GCATTTGTAACGAGAAGATTTTATAATATTTCTTGTTATGGTACAATTTG TTGAATTTATCATTTAAGGTGGATTGAAAATTCTGGTGAATTTGACGACA TTGCCAACACCAAAAGCCATCTTGACTGAACTCACACAAAAAGAATTTAT CGATGCTCTATTAACATTGGCGTTAGACAAAACCTTCCCGTGTGCAAACT ACGTGGCCATGTTGTTATCCAACCTTACCAAAGAGGAGAAAGATGCCAAA AGTATTTTCACTTCGATGAATCAAAATAATAACTTGAAGATCGACGTCTT TTTGGATGCTTTTTGTGACTTGAAATATAACGAGAAGTGTGAACTACACC ACATTGGGAATTTGCTTGCCAATTTGACGTCATTGAAAGAAGTTCGTTTG ATGTTGTTGGATAAAGAGAAAGATGTCATACAACGCTTGTTACCTTTCAC GCAATATAGCGAGTCGAACGTCCGACGGTACTCTGTGGCCGCTATAATAA AAAACTGTCTATTCGAAACAGGTACGTAGGATGGATTGTTTTGTTATAGT GGACGCGGAATGTGACGGGAAATTGGATTTTCATCGAATAAAGGAGCGTA TCGTTTAGAAGAGCGTCGATTATGAACGTTTTTTGGACCTACCCCGGTGG AGGTCCTATAAATTAACCTGTGTTTGTTCGTCCGTCCGTTCGTCCGTCCG TTCGTTCGTCTGTTACCAACTTTTCNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCCAAATT CTATATTTTTTTATAAGCACATTATCAATTACTTAGGTATTAGCTTTTCT CGAGATTGGCTCTTTCATTGTTTATGATTTTTTGCACAAAGATACATAAC TTTAAACCCTCGAATGTGAAGGAGCCCGATTTTCGAAAAAAAATGTTTTT GGGCAAATTTAGGCCAAAAAACGGCTAAAAAGGGTTTTTTGGACTTTGTG AAATATTGGATCATTGTTTTTTTCTGATTTTTTTGCATGAAAGTAGGTAA AAGATAGCTCAAGCAGATTTTTGTAAAAAATGTAAAAAAAAATTTTTCAG CTCAAAAAACGCATCTTTATTTATAAGTATCACTATTGATAAGCATACAT CAATGTTCTTAGCCAAATTATTACTCAATTTTTTGATGATGTGTACAGCA CCTGGCCCCGAGAATGTAGGTGAAATTTGAATCAGACCTGCGAGATGTAG ATTTGCATTTAAATAAATTTTGAATAGTTCAAACGAAATTTTGAACTCCC AAAATCCTTTCCCAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNAATTCATACTTTAGAAATATACTCTGACAAAAAATTAACAAAGA TATTAATTTTATCGTGCTACAAATGATGAAAAGTAAAAGAAAGGACGAAA AGAAGAGAAAAGAAAGTTGTTTTTATTTTGTAGGTTGAAGATTCTGTGTT AAAATATGTGAATAATGTAACAACACCCCTGCCTCACAGCCCCGGTGGAA CTTTTCTCACATCGGGTCAAAAATTTCTACTAAATTCCCAATGGGGATAG AAATTCTATTTTTTCAAACTTAGGCAAATTTTCTGATTGGGCTGGGGTCC CAGCGGGTCTGGGACACGTCGTAAAAGCTTAAAATGCCAACATTAATCAT CTCTCAGGTAATACTTTCATGTTATGAAAGTACAACAAAAAAGTTTTATA TAATTTGACAGACTTTTTATGTCAGTTTATGACATAAATTGTAGGTCAAC TTTAACCCCAAAAGGTAGGTCAAACATTTTCGTTAAAATATCTAACTTAG AACAATAAATATTGAAATGGACTATTTTCCCCATTTCCTTAGTTCATCAG GAATAAGGAAATACCCTATCATCATAACTTAATTCCAATAGATTTCGATT TAGAGAGGATTTATTTAAAAAATGTCTCAATTCGAGTAGTATTTGATCAA CTTCGATTCAGATTTTTGCCTGAAAAAATCAATTCAAGTTAAAATTTTAT GTCTAGAAATAATCAGTTATATGTAACATTTTGCTCTGAAACAACTTTTT ATGAAGTTGAACTATCGTTAGGGCTACAATGCTAAAAAATGAGAAACCTA CATTTTCGGGGTTTACTACATTCTCGGGGTCAGGTGCTGTAGATGTTTTT TTTGCTCACGAAGTCTTCAATATGAAAGATTATTTCAAGAGCATGAAATT TTGGTTTCTAAACGTTTTTTTTATAAGAAACAAACGACTAATTTTAATAG ATCGTCACTATTTGTGTTGTGAATGATTGTTTAACGGTAATGCTCACGTA GATATCAACTATATTTGTTAAATTTATAACCAGGTAGGTCCATAAAAGTA TCACTTGTTTTTGTTATAGTTATGCTTTGGAATTTTAACGTGGTACGAGG GAGACATTTGCATAATATCACCCTTGAGGTTTTCTTGTATATTCTAGAAT TTCACGAGTGGTTGTTATCAGAGGAAGTAGCCTTGTTGACGTTCCTCTTG CTCCCATTGGCTGGTCCTGAAGAATTAAAAGATAGTGAAAATGAAGAACT ACCTTTGGATTTACAGTATCTTCCACCCGACAAAAAGAGGGAACCTGATG CAGCAATTCAAATCATTCTCATGGAATGTATATTTCAGGTTAGTCTTTCA TGTAGTAAACTGTACATTGTCTTGTACCACTTTCGTCAAATTTTCGTTGC CGGGATGAATATTCTAAAACATTTCAGTCCTGTAGTAGAAATTTTTAGAA AAAATGTTGGAAGTAGGATTTTAGAAAACCATATTTAAATTTAAAGTTAC GGTTCCTATTATCCACTTACCCCACAAATATCCCCAATGTCTATCATTAG TTGTAACAAACTTGACCCATACTATTTTTGTTTCAGCTCTGCGCAACAAA GCCATGCCGGTTAATGCTAAAAGATTCTGGAGCATATTATATTTTGAGGG AATTGCATCGGTCGATACCAGAAGGTGAAGAAGCGGGCCGAGAACTGCCC ATCGAGAACGCCATCCAGATTCTCATTCAAGATGAACCCGAAGCCGGTAA AGACAACTTCCGGGAGGTGGAAATACCGGAAGATGTGGCTAAGCGCTTTT CTGAACAGGATGCTGCTATGAATGGTGAAATGTTGGCTTTAAAAGATTCG GAAAGTTGACAAGTGTGACCTCTGACCCAGAAGGGAATGTACCTCATTTA TATCATAAGGAGAAGGGGAAGACCATTCAATGGTTTATTGTCGTCGCGCG ATCTTTCTTCTCTTTGCTGGTTATCTATATTTAGCTACCGCTGTAATGAT GTCGCTGAATCATACTTACGGTGAAGACTGAATCGTGGATGGTGGACTTT GTTGTGCTTAGAAAAGGCTGCTGTACTGACTATCCAGTCACCACCAGCCC AAAACGCAGTTGTCGTGTAATGATTACCCGTTTAATATTATCATGGGTGA AAAGAAGGAATATAATTATACAGTACTCCAATTTTCTAAGTGGCATATTA TTTATGTTCAAAGATTTTAAAAACGAAAGTCTGTAGCCTGTTGAATTTAG TTTGCTAACTTTTTTTAAGGCGAATCTTATTCTATTGTGTCAGGAATCAA AATCTTATTCTATACAGTTGACGCTCTAGAATTCGAGGAGAGTTGGATTT TCATCGATTAAGGGAGCGTATCAAATAGTAGAGCGTCTTTTATGGTCACT TTCAATACTATGGACAAATAGTAGAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018987TCONS_00018987Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018987-proteinTCONS_00018987-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000314supercontigsc0000314:97099..102025 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HGH1protein HGH1 homolog Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.41 14.3 13.07 12.22 30.27 20.66 23.29 25.21 18.69 16.77 16.1 13.67 11.96 12.72 15.95 26.84 38.18 35.3 6.08 7.09 26.5 27.37 37.5 31.53 12.3 14.3 12.45 9.75 35.13 32.07