TCONS_00018987-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018987-protein
Unique NameTCONS_00018987-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length417

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018987-protein ID=TCONS_00018987-protein|Name=TCONS_00018987-protein|organism=Clytia hemisphaerica|type=polypeptide|length=417bp
LFQITFYSSTCNNNDHLFSISLQKNEKVCKVDENIINIRKTYIMVEEMEQ
ALKEILPFLKWHSPLEYKKEVLQHLLGMTGTSEGCSRLSKHLLVNTTLKD
LVICDRIHEIQEGGLKILVNLTTLPTPKAILTELTQKEFIDALLTLALDK
TFPCANYVAMLLSNLTKEEKDAKSIFTSMNQNNNLKIDVFLDAFCDLKYN
EKCELHHIGNLLANLTSLKEVRLMLLDKEKDVIQRLLPFTQYSESNVRRY
SVAAIIKNCLFETEFHEWLLSEEVALLTFLLLPLAGPEELKDSENEELPL
DLQYLPPDKKREPDAAIQIILMECIFQLCATKPCRLMLKDSGAYYILREL
HRSIPEGEEAGRELPIENAIQILIQDEPEAGKDNFREVEIPEDVAKRFSE
QDAAMNGEMLALKDSES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010644XLOC_010644Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018987TCONS_00018987Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007205Protein_HGH1_N
IPR007206Protein_HGH1_C
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007205Protein HGH1 N-terminalPFAMPF04063DUF383coord: 149..318
e-value: 1.5E-51
score: 174.7
IPR007206Protein HGH1 C-terminalPFAMPF04064DUF384coord: 324..380
e-value: 2.5E-13
score: 49.6
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 44..375
e-value: 1.1E-8
score: 34.2
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 51..281
coord: 311..349

Blast
[Close]
BLAST of TCONS_00018987-protein vs. Swiss-Prot (Human)
Match: HGH1 (Protein HGH1 homolog OS=Homo sapiens GN=HGH1 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 5.006e-69
Identity = 139/357 (38.94%), Postives = 198/357 (55.46%), Query Frame = 0 
Query:   49 EQALKEILPFLKWHSPLEYKKEVLQHLLGMTGTSEGCSRLSKHLLVNTTLKDLVICDRIHEIQEGGLKILVNLTTLPTPKAILTELTQKEFIDA-LLTLALDKTFPCANYVAMLLSNLTKEEKDAKSIFTSMNQNN--NLKIDVFLDAFCDLKYNEKCELHHIGNLLANLTSLKEVRLMLLDKEKDVIQRLLPFTQYSESNVRRYSVAAIIKNCLFETEFHEWLLSEEVALLTFLLLPLAGPEELKDSENEELPLDLQYLPPDKKREPDAAIQIILMECIFQLCATKPCRLMLKDSGAYYILRELHRSIPEGEEAGRELPIENAIQILIQDEPEAGKDNFREVEIPEDVAKRFSEQD 402
            E  + ++LPFL   +  + +   ++H+L +TG   G + L+    +   L +L              + LVNL     P    T L     + A L+  ALD  +P A   A  L+NL++E     ++  ++      +  ++  + A C   YN +  LH++  LL+NL+     R  LLD ++ V+QRLLP TQY +S+VRR  V   ++NC FE   HEWLL  EV +L FLLLPLAGPE+  + E E LP+DLQYLPPDK+REPDA I+ +L+E I  L AT P R  ++D GAY ILRELH   PE +        E  IQ+LI DEPE G +N  EV++PEDV ++  + D
Sbjct:   19 EAEVVKLLPFLAPGARADLQAAAVRHVLALTGCGPGRALLAGQAALLQALMELAPAS---APARDAARALVNLAA--DPGLHETLLAADPGLPARLMGRALDPQWPWAEEAAAALANLSREPAPCAALMAALAAAEPADSGLERLVRALCTPGYNARAPLHYLAPLLSNLSQRPAARAFLLDPDRCVVQRLLPLTQYPDSSVRRGGVVGTLRNCCFEHRHHEWLLGPEVDILPFLLLPLAGPEDFSEEEMERLPVDLQYLPPDKQREPDADIRKMLVEAIMLLTATAPGRQQVRDQGAYLILRELHSWEPEPDV---RTACEKLIQVLIGDEPERGMENLLEVQVPEDVEQQLQQLD 367
The following BLAST results are available for this feature:
BLAST of TCONS_00018987-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HGH15.006e-6938.94Protein HGH1 homolog OS=Homo sapiens GN=HGH1 PE=1 ... [more]
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