XLOC_004597 (gene) - C. hemisphaerica

Overview
NameXLOC_004597
Unique NameXLOC_004597
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000082:280983..288245-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004597 ID=XLOC_004597|Name=XLOC_004597|organism=Clytia hemisphaerica|type=gene|length=7263bp|location=Sequence derived from alignment at sc0000082:280983..288245- (Clytia hemisphaerica)
ACTAATTCGCGAGTTTCCGTTGTTTTTTTTGGAATCTAAAATATGTATCA CGAAATGAAACGTTTTTCGACCTCAGCCGCGCGACTATATGATGAAACCT GACAGAAGGTTTTCAACCAGATTTATTCAGATAAAGCGATAAGAGGTTCA TTACTTGTGGATTTTAAAACCTACATAAGCAAAAACGTAAGTTGCTGGGA AGGAAAGAGTAAACACAAGACAGAAGGTTTGGTTGTGTTGATCAGGTATG TTTTTATTCTATCGGAACTAATATTATAAAAGACCAAGGAGGCCCTGACT GGTTCAGGGAGCTCGAAACAAGCACTCTTTTGTGATTTTCTCTTTTACTA TGGTCACATTGTCTGGTCTGTAGTTTTACATACAATGCATGGCTTATCCA TTTCCATACAGGGATATTGACAAGGGTGGTCTGAGCCTTGATTTTCCAAG GGGTTTATTATTAAAGGTATCCATGGAGTTCTTTCCTCGTAAACTGACAT CAATAGTCATTTTCCAGGCCCTTTTTCACAAAATTTTAGCTTCCAGGGGT GTCAACCCCTAATTTCCAAGGGATAGTATTTGTTATCCAAAATTTCCAGG GGGTGTAGTGAAAAAAGTTCGTCAATACCCCTGTGTAATTTTTTTTGGAA TAGCCCAATAATCGTTTGGGAGAAGACTGTGGCGCTCTTTTGAATAACTA ATTTCAGACGTCAGTTTGAACAAAAATTGCGATCAAACCAATCGAATGTA ATCGAATGTAATCGAATGCGATCAAATAATTGCTATTTGATTATTTAATT GTCAAACGTGATCGAATCTCAATCGAACGGCCGATTCCCGAGTAATTAAT ATACGATTTTGTTCAATTGCGTTTGAATAAGAATCGATTGGTTCAATTGA TTGTCAAATATATGTTTGATTGATCTTCGATCATGTTTGATTATCACAAT TATGATTAGGTTCAATAAATTTGATTGCAATAAAATTGACCCACTCCTTT AGAGCTTTGGCGTGGGATAAGAACGAGTTTATAAATACTATACAAGAGAG AATATATCAATTGAATGTAATCAAACAGTAATTGAGTACAATCTAAAGTA ATCAAAGCAATTGAACAGAAAATCCTGGGTAGTTATTTGCTTACAATTCG ATTGTGTTCAATTGATTCAGTGCTCGATTCCTCAATTGACACCGTCTGGC TAATTTCAGTACTATATAAATAGTCGTCAGAAACTGTCTGATGGCATGAA TCTGTGGCACAGTGGATAGAGTGTTGAATTCCTGATCAACAGATCTTTGC ATTTAACTTAAGGGGTTCGAATCCCTTTGGTTGTGATCTTTCGGGAAATC ATTAAACTGTTCAAAATGTAGATGATAACTCACAAAGTCCCAACAAATTA GAAAACCTACGAACTAGAGGCTGAAAGGTACGAAATAGTTCAAATGTAAC CTTCATTAATTCTAACTCTTCAAAACACTATACTAAGGCTTAGTGAGCCA AGAACTTCTGCCACTCCCTTTGAGCTTTATCATTCTGACACTGATATTCA CAACCTTGATACTTATGAACTAAAATCTTTAGCTACAAAATTCTATTTAA ACAAATACAAAGCTAAAGGTGTGTGCGTGCGTGCTAGAGTTTTTGATTAT CGGCAGAATGACATTGCGTCTAGTGAAGGGTCTCACAAGTTTGATAGACC CCAAAATTGATGAAATTGATAAAATTTTGTCTGCAATTTCAGAACATTAA ACTGCACATTTGGGCCTGAAAATAATCTTAAGCTTCAGATTTGATCAGGT CTGCCAAATTTTTCCATTACTAGGATGTTTAAGAAAACTCATTAGGATTA CTCCTTTTCCAGAGTCAAAAATTTCAACTATCTGACAGGTCAATAGTTAT AACTTTTTAAAAAGTTTTGAACAGCTTAGCCTTTATAAGCCTACGACTGC ACTCTTTCGATAGCTATCTACCCAAAGGTAGGGGAGGGTGCCACTCTTTC TCCCTGGATTGCTCCACTTACCCTTGATCCTTCTCTTAATTGCTGAGCAT CAAGCAGAGAGGCACCGTTTTAGGAATCTTTGGTATGGCCAGACTGAGGG TTGAACCCACAATCGCACCATAGCCGGATGCCCTACCACTGCACTACGGT CGCTTTGTATTATGACGTTTTTTTGGATGATAGATCAAGTGATTTTTATT GCAATTCAAATCAAGAAAGAATGTATTCCATGATAACGGTGAGTTGTCTT AACACCTGTTTACACTTTCATTTCACTATTTATGTTTTAGGGTACTCGAT CAACTACAGGTTTACGTTCTTCTTTTTTTCAGGTATATATTGACTTTGGT ATAGTCAACACAATCACCAAAACAAATCAATGAAAGAATATATGGAAAGT ACTCAATGCAATTAAAAGTGAGTTTAATTAAAAAAAGTTAGTCTTTTTTT AAATTTATTGTTTATAATTAGATCAATGTTACTTGTTAATGAAATGTTGG TAAGGATGTGTATTATATGTGTAGTGATAGGGTAACTTACGTGAAATGGA AACATAGGGAGATTTCTAACCTCATCCCTCCCAGGTAGGTTTGCAGTAGG TTTTCACTAAAAAACCTTCTAGTCTTATCATTTTTTTGAGATTTGATATT ACTCTCAAGATACTCTTTTTACTTTCGAGCCATCATATTGATATTACATT TACTTTCACGTTTGTTGTCTCTATTACCTTTTCGATGCATCGACTGTCAT CACAGTCATAATAACCCATTGTGGCAACTGTTACACAAGAACAATTATCT TGAAAGTCCAAACTTTGAAAATTTGACCTTTTCTGCATCATTAGACAATG GCATTTTGATTTTTTTGTTATGTTTCAGTGTGTTTAATTCGGTTTTTGAA CATCTCCCCAGTAAACATATTTTATAAGCTACAGACAGATTTTTTTAGAT TATTTAAAAATACGCATATAAATTTGACATTTTCAGATCATGTTTCCGTT GAGATAGCTTGAAAAGTGATAAGTCAATCTAAACATGAACTATTGTTGTT GTTTTTGTTGGCCTGTCTGAAAGTGACGTCAGAATCATGTAACATTTCAA TTGCTTGTTACTTCCTTCCACTGAGATATGAAAATGAATTTTGAGAACTC AATGGAAATTCATTTGAAATTAAAATTCGTTAGAGATTTTAAATGCAGAA CGGTCTGGAGGAAAGTGATTCGGTGCTGGCGATTTTTAGTTTTGTAGTTT TGGCCGATCGTGATATTTTGACTTGACACCAAAGTTTTGGATGAATCAGA AGAGCTTATCGTTCTACATCTGCAATTTGAGCTTTACTAATCATAAGAGT TGTTGCTGGTGATGAGATATACCTGTCAATCTTGTTCTCGCCTTATCTGT TGATGGTTATTAGAAAGAAATATTCATATATCAAGTCAAGCAAGTTATAC AAGACTGTCGAACTTAGTGTTTTAAGAGTACAACATCTCCGAAGGTAAAA AGATAGCTCTAAATTTCCTATTTAGTGTCTTGAAGAAAAATCAGAGTGTT AGAGGTTTATTAAAAAATGTTGCGATTGATAAACGATGTGTAAAGTTGTT GTTTACTTTAAGATTGAATATGACCTTTTTATTTACAAATTGATAAATTG GTCATGAAAGGAGTGAAAAGGGAGAGAGAAGATAAGTAAACGATTACACA AAAGTATTAACTTGTCAACATGAGCTTTCAACGGCCGCTGGAATGTCAAC ATTGGAGATCTCGTCATCACCATTGGAGTAGTAAAAGATAAGACCATCAG ATTTAGTTGTTCGCACATGGTGGTCTTGCAAAGTCACATGTTTCGTCTTT TTTTGATCAAAATGAACCGGTGTAAACCTAAGTTTGCTTACATTTTGTTA TGGATCATAGCGTGAGGAGCTCTATCAGCGTAGAAGTTGTTGCTTAATCT TGCGAGGATTACACCTGAAGTTGGAACACTACACTACTGAACACCACTGA ACACCACGACCAGATGGAGAAAACCTATTTGAATGGTGTTCTACATTTGA AGAGCTTTTCGGTTTGTTATGAAAAGTAAATTACGTGGTAGGGGCAAGTT GCGAAGCAAGAAGATTAGTTGTTTATAGATAAAAGATATTATATATGTCA CGTGATTCAACACCCGATGACCTTCGTTTGTTATCCATATAATGAGTCAG GACCAAAAGTATTGCCTTGTTTTTCTAACTTAGTTCCTTAATACAAAAGA TTTAAAGTTTGATCATGTTTGTTTTGAAATGACATATCTTATTTGTACGG TCTACTTTAATATCAGTCTTGCTTCCTTACACATCGGAAATCTCTGAAAA GGTCTTATATCATCATCGTTGATGTGTTGTAGAGGTCAAAGTTTTGTCAT TTTTTACTTGTTTCGGAATTCAAAGTAAAAAGAATGAAATAAAGTAAAAT TCAACTTGTCGTCAAACTGTATTTAATAGAATAATTATACCATCATTGCA ATACTTTGTGTATTGTTTTAAAAGGCTTTGGTATGCTGATATCTTCCTTG TGTTATGGAAGTCTGAAATCATTTTTGTTGAAGCGTTTTTGAGATTGTTT TGTCCAGTATGATATCAGGAAAGAACTGAACTGATTACTTTGAGTAGACA TGTCAGTTTGATGCATAGCCTCCAGAATTTGTTATCAGTTTTGAAAGTAA TCTTTGACCAAGTTCCTCCCTATTTCACCATTGTGTATTTAGACAATGGA AGTTATATAATGTTCGTTCATCAAGTGATTTACCTCAGCTCATGCTTCAG TAAGGTAGCTTGTATCAGAGAAGTTTAAAATGTTGAAAACATAGTTCTCT GCTAAGAAATTAAGGTAATGAACCTGTGAGATAATTTTGATCGATTCACT GAATCCTCAACTTCTATCAGTAGAAATCTGAATCATAAAATATTGAAAAA AAATCAATGATGAAGTACCACTTTGCAGTTTGTTTGTTTTTGTTTATGGT GAATTGCATCATGGGTAGTAAACACCCAAACATTATTATGATTGTGGCTG ATGATCTTGTGAGTGTTCTCTTCTGATCTTGCTTTGTTAAGAAATTTACC CAATAGAGGCTGCATAGTGTCCTCCCCCCCCCCCNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NATTTTCCCCCCCCCCCCCCTTTATAAAGGGGGGGGGGGATTCTGATTTT GGCCCTATTTTTAAAGTATGGGGGAAAATGAAAAATTTGAAATTTGCTTG GGGAAAATAAAGAGGGGGGAAAACCATAAATTTAGGAAATTTTGACTGGG GGAACTTCACTGATCTCAAGGTTATCTTATTGCAAAACCCGTTTAAGCAA TAAAATCAACCAACCTTTTTAAATAAACCAACTTTTCAATACAATTTCAT TTTCCCAGCACTTTCAAGGCTATATTTTCAAGCTTTCCCAAAATTTCAAA TTTGATTTAAGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGAAAAATTTTG AAATATGGTGGGGGAAAGAAAAGAGGGGGGAATGGAGAAAAAATTGGATT TTTAGTGGGGGGAACCAACCCAGGAGGACACTATGGGCTGAAATACTCCG GGTGGGAAATTTCTCAAATGGAGGCCAGGATGTTAAAGGGATAACCAAGC TATTTTTCTTGTTTATATATATGTTGTAGAACGATAGTGTATGCGAGCTT TCAGAATTGTACCCTCTCTGTGACACATCTGAAAATGAAAATAACTGGAA GCGGTTGAAATAGGGATGTTCTGGAGGATCCAAAACTTAATAAAGTGATA TGTTCTTGAAGCCATAACTTCGTCTTTGTAGTTTATTTATAAAAGCTTGT AATCTGATGGACGGTAAATCCTTTAAGCTATCTTAAGCCTCTAATGACGT TTATATTATGTGGAATTAAGACCACTTAAACCATTTTAAGTTCCAATAAC ATTTGGAAAACATGGAGCTAAAACAAATATAAATCTAATCTGGTGTTTTA GTGTGAATCTCGTTTAATCGTATAGACCACCCATTTGACAAACGTACATG ACATTTCGCTACAAAAAGTATATTTTTAAATGCTTCCATTTAAAAGTAAT ACGAATACGATAAATTGAAAACAATTGCAATATGACCTTAGAAAGGATAA ACAAATTTAAAGACCTCAAATGTTTATAAATTTCAATGAGATTGCGCAAT CAAATGTTATCGTGTTCTCTGTTTCCCTCTAATACGGAAACTCAACTTGA GTCAATGTTAGTACTAAGAACCCAATTAAGTTTGGAACGTAGCGTGCTTC CAATAACCGAATCTTACTAACAACAATGTTTGGAATATCAAACAGTTAGC TGCACTGGTGATGGATAACATTGCCAACATAACGCATTTCTATTACTTTT GATTTATCTCGGTTCATTCTTTTTTCAATATTCGATCATGTTCGATCTTT CTTTCCAGGGTTTCAACGATGTCAGCTTCCATGGTTGTCCACAGATACCA ACACCCAATCTCGACCTCCTGGCAAACAAAGGAATCATACTCAATAATTA CTACGTTCTCCCAAACTGTTCACCCACCCGTAGTGCTTTGCTGACCGGAC GGTACCCTATCAATACCGGTATGTGTTCAGTTTGCATTTTAACTTTTATT TTCAAATGAATACTTTCTAATTCATTTTGAAAATGTTGCTTTCGTTCTTT GTCAGGACCTGGATCTCATACGATGCCAGTGAAGTGGCACTGAATGGGTT TAGAAGAAGATTTATTTTAACACACAAGTGTTGTATACAAAACGCATAAA TTTTGAGTGGAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008162TCONS_00008162Clytia hemisphaericatranscript
TCONS_00008161TCONS_00008161Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008161-proteinTCONS_00008161-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000082supercontigsc0000082:280983..288245 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.83 1.88 1.09 1.73 2.54 1.78 2.21 2.91 3.89 6.57 3.76 2.82 3.15 3.68 2.16 1.85 2.88 3.51 3.7 4.35 5.52 5.84 3.26 2.31 2.6 2.9 0.52 0.66 2 2.9