XLOC_004383 (gene) - C. hemisphaerica

Overview
NameXLOC_004383
Unique NameXLOC_004383
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000079:279928..288027-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004383 ID=XLOC_004383|Name=XLOC_004383|organism=Clytia hemisphaerica|type=gene|length=8100bp|location=Sequence derived from alignment at sc0000079:279928..288027- (Clytia hemisphaerica)
CAGGCGTGTGATCCCACTCATTAAATTACATATACAGACTGTGTTAGATT CTTTTTTCTCTTTGCCTTTCAATTTTTAAGTTTCGCTTAAAAAATTTTGC TTCGCAATTTTTATCTCAAAAAACTTTTTTCTTCGCCAAAACCTGAAATT GCTTCGCAATTTGCGAAGTGCGAAGCTATAATTCGAACCCTGAATTCCTA TGGCTACTCAATCGACTTCTTCAGCAATCACCACATCACCATCTGGGAAA AGATCTCGATTCCAATACACCTCCATTGGAACATCGCCGCCATCAAAGAA GCGATCAGAAGATGGTAAAATTGTCAGCCCAATCAAAGCTTTTTTTAATA AAGATGGGAAGGTGATTGTGAAGAACATGCCGCAACGTCAACATGACCCA TCGACACTCAAGCCAGACAATCTAAGCTCATCAACGAAACCACCGAGACA AACAGTGCAAGCGGAACAGCATAGCAATGTTCCGAAATCAGTAAGAGTTT CTATTCACTTTTCTATTCACGTTTCTTTTCCAATCTTTTGATGGGGGATA GAAATACTATTATTTTGGGGTTAACCTTTATGTACTTAGGGGGAAAAATC ACTTCACTAAGTTTGCTTGAAATATACTTAATCCAATTATTTAAGCTCAT GAAGCTGATAATAGCTTGGAACTGCTATGCAATTTATATATGAATTACTT CTTTTTTCTAGGACAATTTTTTTTCATTTCATAAGTAAAATATCTTTTAT GTATTTCCACCAATAAGCTCTGGGTACACATTAAATTTTTTTTGATTTTA TTTGGTAAAAAATTCTTGATGATTATTTTGCATTTTAGCCCCAAAAGTCT CCCCCGTTATTTGCCAGACAGCCTAATGATTACACCCGAAGAGTCCCAAA ACGTTGGTTAGAATCTTTGAACCAAACAGAGGCTCAATGTTTGGGACAAG AGCTTTTTTCGAAAACTGAAGGTGAAGATAGGATGAAAAGACCTACGAAA CTTTGGCATCATCCGCCGGAAATCAATGATGATGCTGTCAAGAAACCCAA TTCAGCGGAGTATAATATGCGGCGACTGTTTTTGTGGATGCCAAGAAAGA TGTTGGCATTTGAGTTTGATTGTCCTAGATCAGAATGAAATGGTAAGGGA TTAACATCTAAAGGACTTTACAACAGGCTACGTCATGTACTTGATGTCAA TGATTTTTATTATTTGGCAACTGAAAAGCTATATTGTCGTCGCTGCGGGA AGGACTTTCAAAGTTATGATTCTCGTCTTATTGAGCAACTACCTTTGCAT AAGCAACTCCTGTTTCCAGCAGTTCTGACAGGTGTTTACGCATGCGATAA ATCCTTGATATCTTTGATGAAATCTCGTACATTAGGCAATAGCTCTCATG CAATGAAAAATTCCATACATGAAATGCATAGCGAACATTGGGTCAAACAA AACATGATTTACCTAGATCACTGCAAGAAGTACAAGGATAAGGTATCATT TTTTAGAGGTGCCGAGGAGATTGAGTTTTTGTGTGTTGAAAGGGGATACT CTTTTCTCCAAATGATATGTGCCCCCAAGAGAAATCATTTGAAACCAGAT CATCTAGAAACACTCCTTTTACAGTGAAAAAGTCTAAAGATTACTCAAGC GAAATATAATTTTTGGAAAAATAGAAACTTTTAACTAGTCAAGGACACAT TACAATTATTACATTGCATTTACACAGTCTCAAATTTTATGTTTTTATGA TTTTGAAGATTATAGATCCACTATGATTAAGGTTTGGTCTTTTTTTTAAA TCTTTCACAAATAAAGTGTCATACTGATCTTGTAATTCTGTACTTCTGGT CAAGCATTACATGCTTTTTTGATTTAGTATTTCTTCATCTTGTGTGTTTA TTTTAGGATCCTTATATTCAGTATTTTTAAAGTTGTTTTGATTTTATTTA GGATTTTAATTTTTCATTTCATTGTTTTTTACTGCTTTTCTAAACATGTT TTGTTTACATTAACCCATTTTCGTTTAATTTTGTCTAGTATTCCTTTTGC AGCAAAATTTTTACGTTTGTGTAAGTTTGAAATTTGAGCAATTTATATGA ATATGTGGGGGGAACTGATACTTTCAGAATTTTCTGGGGGGAAAGCAAAA AAGAGGGGGGAAACTAAAAAACTGAAAAGTCATAGGGGAAAAAAAAGAGG GGGAATAATTAAAAAAAATCAAGAATTTGGTGGGGGAACAAACCCTGGAA GACACTATGCTATTATATTAACGAGGACTACTCAGATGAAACTAATTTAA TTCGAAAAGGACTATTCAGAGAAATGAANGAACAAACCCTAGAAGACACT ATGCCATTATATTAACGAGGACTACGACTCAGATGGAAAAGGACTATTCA GAGAAATGAGACAAGCAAGGGAAAGTGGTAAGTTTGCTAAAGTGGTCTAC GACAAAATCATTATCAGAAACTTTAGACCATCTCGCTAGTTTTAGTTAAT TTCTCTAATTATTTTTATTCTTCGTAATTTTTTCCAAAAATCACAATGGG TGAATCCTCATTTTCTTTTTTGAATAAAAATCAACTACCAACTCTTAGTG ATTCGAATGATCCAGACGCTAACTTTTATGAAAAAATTTCTTTTGAAACT CCATTTTTGACCCTAAACTTAGTAAGAGAGAAATAGCCTGTCTCAACAAA TTATATCGTGTTCACTTATCTTCAGTTCCTTTGTTTTTGCTTTCAAATAG TCTACTCACAGTACGTGCGTTTTTTTCTGAAGGATTAGTGAATATATAAG GTTATTTTCGGTTCAACGATTAAAAAATAATAATAGAATCTGTAAATTCA AGGTGTTCTCGCAGGTACATTTTAATTTGTAATTAAAGGACTCTACTTTA CCCCTGACGCGAGAGGCAAAGATACGGAAATTATTCGTCACGCTGTTAGG TCATATTCTTCAACAGCAAGACGAGACGAAAAGCTCCCGAAAGTTCTATG GTAAAAGAAGGCGAATATATTGTAAAATTCTTTATCGATGTAGGGTAATT CCATGTCATCCAAAATTTAAAAAATCTAGACACCATTAGCCCTCAGATTT TCTTCAATTTTTTAACCATATGAAGATGTTCATGAGAAAAGGCAATCCTG AAAATTTCACCTACTAACTCCCAACAGATCCGTTTTTATGGCATTTTGAA ATTTGGGTGTTTTTAAATCAGGGTGTGCCCGGTCGTTATTTTTAGACGCC CTTTTTTAATATTACTCCTGTTCCAAACAAGCTATGAAGCTGAAAATCTG TACAGGTAAGTTATTTACCCCAAGGAATCCGATGAAAGCATCAGAAATAC CCAAAAATGAATTATTCAAAAGTTACAACTAAATTTCAAAAATTGGGACT GGAAAGTCCATTTTTCCCAAAAAACAAATGTGGGACAAAATATTTTGAAA CAATTTTTTCATTCTTTTGTTTTGATAATAATATTGCTCTGGGCAAAAAA TCTGATAAAGTTCTTTCCTACTTTGCTCTCAATGCTACTTTGAAGTACTG GTGGCAATACATTCGTCTACAGAAACAATATAAAACTGAGGAGGCCCGGC CAGGGGGTAAACGAGCTGTTCTACAAATCCTTACAGGATACAAGGACCAT TGAGACGTATATAAATGTGTACACTGTAGAGACTACAGGTAAATGGAGTA GCAGGGTAGCCAAGTTAAAGGACTGGTATGGAGCAAGTGAAGCTGCATAT ATTGAGAAAGTCCGCAGGGATGAATGGACACATTATTCCATGAGGCTTAG TGATTTGTTCGAAGGAGTCGTCACCGCCCTTTCGGCCACAGATAAGGACC GATTGAGTATTTTGCTCACTTTGAAAAGGAGTTTACCAAAAAGCTACCAT ATGGCGGATTGGTGAGTAGGATATCGATCATTAATCTTTAATAAAATGAA TTAAGATTTGAAAACGCATATTTGTCATACCCGTTCTTCTTTCAGGTATA TTCGCAAACAAGAGGGTGTATAGAAATGGCGGATATCGCTAGCAAGCAGA TGGGGTTTTTTATGGCAAATAACGATGACGAGGTGTACGGACCAATGCTC AATAACATTCAGGACTTCATGGGCGGGTTTGACCTTTTCCAGTGTGATAA AGAAATATTATCATATTTGCAAGCTATTCAACAAGCAAACCCGCGACTCA TTGCAACTCCTAAGTAAGTATTGGTTATATTAACGCGCCCGTATATTAAC TTGGGATATAATCTGCTGTTACATACATAAGCCCTCATTCATTTTTAGAA TGGATATGTCAAGCGAAACCTTACAGAAGATATCGAAACCACCTAACATG TACATGCAGCATCTGCTCAGCCATCTCAATATCGTGGACAAAGCGACATT TTGGAGGACAATGACCGCATTTAGAGGTATTGCAGTCCCATTCATATCAA CCACGAAATTCAACGAAAAAGGAGCTCGTGAAACAATATACAGTCCGTAC CATCAATACATTAACCGCGCCTTTATGAAAGTGGCTAACTATGTAACCCC CTTTTACGATCAATGTTCCTCCGATAATTCACTCGTTGATGCGATGACCA CGGTGAAGGAGATTCAGGAGAAGACAGCTGTTGACACACAAGACTCATCG TATTATCTAATGCAAATGATACTTGCATTCTGTGACAGTCAATTGTTCAT TGAACCCGTTGTCAAACAAGGGAAGATTGGCAAAGCGTGCAGAGGATATA CGTTTGGTGACTACGAAATCAGCGATGAATTAATGGCGGAGTATCATGCT ATGCGTAGTGTCGTCAAATCGCCATCATATCATACAATACACGCTACAAC ACCCATAGGGGTAAACGGGTAAGTCTATTAGCTAATGGGTAAATGCAATA TATGAATGTAGAAACTAAACTATATATTTCAGGCAGCAGCACGACAAGAA TAATAGTGACTGTCATTTTTTATAGATCTGCCATAACGGACAAAGCATCA GCAAAGAAGTATCTCAGAGGTTTAATACAAACATTGAGGAAGCACCGACA TGACATTACAATTATATTACAGAATGTTTCGACAATGACACAATTGGACG TGAGTATAACAGTATGTGTTAACTATACGATTGTGTTAGTGTCTGACAGG GGAGTATTGATATTCGTGTCTACTGTTGTTTAGAACTTTCTGAAGGCAAA CGCACCACGCCCGCCAACGGTAAATCATTGCGAATGCTGTCCGAAGGGCA GGAAACATATAGACGGTATCAACCACTACGACATAATGGAGTCGATTGTC AAACCGAAGCCGAAGAGACATGTTACCCTACTAAATGGTCCATCGCATAC ATGTAAAAGCTCGTATGTTGAACGTACGTCAGAGGTGTTCGGCGGCTGCT ATTCATTGACAGGCAATGTAAAAGCTGGGGAATTCGACTTTAGCCAAATG ATTGCAAGTCCAGAAAGAATCACCTTCCTGGACGAAATGGACTCCATTTA CATGATGCAAAATACCGGTAAATATCAAATATTTGGCATTACCCTCCATA TGAAGGACACTGTATCTATATAATATTATCGAATTTCCTTTCAGGTGCCA TGAACCAATTCTTTGATGGCATAACACAGAAAATACATTGTAACATCAAA TATGGGAAGATAAAGGAAGTTTCCACGCCCAAATCAAAACATACGATTAT CACAACGAACGACCTTAAGCGTTATCTGGCACCAACAACGAACGAAGATT CAGTGGAATTACAAATGTGCAAGAAGCCAGTGCACAGGTCAGTTTACTTT ATTAGCAAACTGATATTTTCTTTAATGAGTTGTTCTCCTACAAATAATGA GCTGTAATCTTTGCCATAGGTTCGCACAGCGAGTAACAGAATACAGACTA CGTTTGTTAATCACACCCGATGCATCGGAAGCAACACGACGAAAGTATAA CTACGATGCAATTGGAGTAATAGCGCACTTTCTATATAATTGCCTGTCGG ACGATGGAACACCATCATCGATGAAAGCCAACGAAATCATGGAACATATC ATAGATCGTTGCAGTAATATATTTCCCGCAGAAGCGAAACAGGATAGTGA CCTACCACCGGTAAAAATAAGGAATATACATTGGGCGAGTGGACAAGAGA AGAAGTACAGTATGTGCTATAATGCGATGAACCTGTTGCCCCCGCCGTTG CCATGAACAACATGAATCATAATTCCACTCTGTTGGACGATTTGAAGCAA CATCATACGAACGGTATCGTATTTCTCGCCAGCGAGAACTATAGAGGGAC AGTAGAACATTTCAAATATTCTGCTCAAATCTATCAAGCTAGATGTGCGT TCATGACTGCAGACGTACTGCGCCAAATGATAGACGAAGGAAATTAGAGG AATATTCCATTGGCGAGAAGGGATATCGAACGACTACAGGCTTCGTTCCC TCTCAATCCAGCGCATATAGACGACGAGCAAAGAATGTACATGAGAAGGG CACACATAGAGAAGCTCTTTGAGGAAAATGGTATAACAACCGACGACGCC CACGACGCCACCGCCGAACGCGCTCCATCGCACCACGCCGACGATGGTCA ACAACCCGGTCCATCATCTCACAACAGAAAATGAGAAAACGCAATTTGTA AGCAATCTTTATTTTTATTCTCTATTCTTTCCTTTTCAGTTAAAAATGAA ATATATGTTGCCAGAACCATTACCTGACTTTGACGAATATGTACGGTTAC ACCTACATGAAAATGATGATATAATCCATATGCTTTATAGAATTGCAAAT AGCGAGGACGAACAAAAAGCAAACTGTAATCTCAAACGGATTGGCATTGC AATGAGACATATAGTATTCAAAATACATTATAAAAGGACAGGAATAACCG AGAGCTTAATACGGCAGTTGAACAATATTATCACAGGGAAACCCGTTTGG TATAGTCCTCCCTATATCATTTGCAAGTGCGGCTACCATAAAAAGAGAAA CAAATTATTCCGGTACTGATACCAAAGCTAAACAAACCAAGCCAGAATGT ACCAAAAGTACACCAATATCACCAAGCAGTGTTAATTCAAAACTTTTGTC GTCAAGGACATTTTCACACGCTGGAATGTAAACAAAGATATCGGTGAGAC TTTGATGATATTTTTTCCCATTGGCAATTTTCAAATTGAATTTATTGTTG ATTTCTTCTTTGTTATTATATATAGGATGGTACTGTGTATTTTTTTGTTA TGAGTTCATAGTAAGATGTTCTCAATTCTAGTCATAAGGAACGTGTCAAA CTGGAGTTCTGGTTGACAGGTAATTTGAAGGTTTCATCACTCAGAATATG TATTATTATAGTGAGTAGTTATTTTACAGTAACGCTCTATTCTTATTTTA AACGTCCTCAGCCATCAACGCACAAGACAAGTATTCCACGCTCTATTCCA AGGAATATTCAATCCCTGTCACCAAAAAACAATCCAAACGAGAAAAACTT GCAGGTATATAAATTTCATTTTAGTAGTATATACAGTAGATTAAAAGACA TTTCAGAATTACATTTAAGATTATTCTTTCTAGAGTGCTATTTTTGTTTA ATGTTTGTTCCTTAACCTTTGACCCCTGTTACTTTTTTAGCTTTCTACAC CTCACCGTACAAACGCTCTTCAGCACCATCAGCTATTCCTGTTTTACGAA AACCTCAAACTCCACGTAACTTAAGTGACAGTTTTAAACATGCTAAAGAA AGCACGGTAAGGACTTCAAAATTTTTATTGTCCCATACTGTAGTTACAAT ATATTTTTTAATGTATATATTTTTCTAGCGTACATGACGTTTTTTATGAA CAGGGACATATTTCTTCTGCTTTTTCAAGGAAGAAAAGTGAAACTGTAAA AAATGGATCTTTCGTTAAAAAGATTTTTACAAGATTTTGAACTGTCAAAA AATGGCCTCTCAGTAAAAAGACTTAGTAATTTTTAGAGAAAATGAAAGTG AAGTGATCACGTGATTTGTAGATATCAATTTTGCAGCTTTTCATATATTA TTTTTATATGTATATATTTTTCTTGTGTATATGACATTTTCTGTGTATAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007731TCONS_00007731Clytia hemisphaericatranscript
TCONS_00007730TCONS_00007730Clytia hemisphaericatranscript
TCONS_00007729TCONS_00007729Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007729-proteinTCONS_00007729-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:279928..288027 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.28 1.05 0.89 0.44 1.89 2.01 2.06 2.62 0.74 1.72 1.38 0.89 1.52 1.62 0.7 0.84 1.12 1.12 0.49 1 1.92 1.42 1.24 1.12 2.69 2.91 0.71 0.81 1.8 1.51