XLOC_004215 (gene) - C. hemisphaerica

Overview
NameXLOC_004215
Unique NameXLOC_004215
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000077:666494..669968+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004215 ID=XLOC_004215|Name=XLOC_004215|organism=Clytia hemisphaerica|type=gene|length=3475bp|location=Sequence derived from alignment at sc0000077:666494..669968+ (Clytia hemisphaerica)
GGAactaattgaaaaatatatattttgaccCCCGGAAAGTTTTGACCCAT GGCAACTGAACACATGAAGATAAGGTCGCCTGTTTAACGTGAATTCAGAT CGAAATAGGCAGTGAAACACTGACagcataaattttcaaattctaggTGT TGTAACACGaactaatataatttcaaaatgagaGAAATCGTTCACTTGCA AGCTGGACAATGCGGTAACCAAATTGGTGCCAAGGTATGTGCCTTTTGTT TTTTTCCCCCGCTTTTCGTCCTATttttttgtgagtttttgaaTCAATAT GCATTTTCTGAGATGCttagaaaactaaaaaaacgtCTCTTTACTTTTGT AGTTTTGGGAAGTCATCTCTGATGAACACGGTATCGACCCCACCGGAACC TACCATGGTGATTCAGATTTGCAATTAGAAAGAATCAATGTATATTACAA TGAGGCCACTGGtaagttttgattttcttcatGCCACTCCCACCTAAGGA TGCTTTATTGCAATAATACGTAATGTTATCTGAGgcttgaaatatcttta tttaaGTTAACAAGGCAAATTGCATCCTCCTGTCCTGCTTGTGCTTCAGA CTGATCATTTCTTTTGGAAACATTAGATGAGTCTTCATCAAATAAAGTAA AGTTACAACGTAATAGGATAAAGTACTAAAGGATAtcaaatttgttcttt tttcagGTGGTAAATATGTTCCAAGAGCTGTCCTTGTTGATTTGGAACCT GGAACTATGGATTCAGTTAGATCAGGACCTTTTGGACAAATTTTTAGACC AGATAATTTCGTTTTTGGACAATCAGGAGCCGGTAATAACTGGGCTAAAG GACATTATACTGAAGGTGCAGAGTTAGTAGACTCTGTTTTAGATGTTGTA CGTAAAGAAGCTGAAAGCTGTGACTGTTTACAAGGATTCCAACTTACACA CTCCCTTGGTGGAGGCACTGGATCTGGTATGGGAACACTTCTCATTTCCA AAATCCGTGAGGAATACCCTGACAGAATCATGAACACATTCAGTGTTGTC CCATCCCCAAAAGTCTCTGATACCGTTGTTGAACCATACAATGCTACCTT ATCTGTCCATCAACTTGTCGAAAATACTGATGAAACCTTTTGTATCGACA ACGAGGCCTTATACGATATCTGCTTCAGAACCTTGAAATTAACAACACCT ACCTATGGAGATCTCAACCATCTCGTTTCTGCCACCATGAGCGGTGTCAC CACCTGTCTCAGATTCCCTGGTCAAGTAAGTATATTTCAAGTGTCTTTAC ATTGGTGAAGTTATAAGGCTGAGTGAAATAGCTTTCTTACATACCATCAT AGGAGTGATTTGTTgtgttaattttcatttttagtcaGGTCAAAAACTAA AGTTAACTATAATTTTGAGAACTTTGATTGGTAAATATCAGTATTAAATA TATCTCTTACTTGTANATACGTAATGTTATCTGAGgcttgaaatatcttt atttaaGTTAACAAGGCAAATTGCATCCTCCTGTCCTGCTTGTGCTTCAG ACTGATCATTTCTTTTGGAAACATTAGATGAGTCTTCATCAAATAAAGTA AAGTTACAACGTAATAGGATAAAGTACTAAAGGATAtcaaatttgttctt ttttcagGTGGTAAATATGTTCCAAGAGCTGTCCTTGTTGATTTGGAACC TGGAACTATGGATTCAGTTAGATCAGGACCTTTTGGACAAATTTTTAGAC CAGATAATTTCGTTTTTGGACAATCAGGAGCCGGTAATAACTGGGCTAAA GGACATTATACTGAAGGTGCAGAGTTAGTAGACTCTGTTTTAGATGTTGT ACGTAAAGAAGCTGAAAGCTGTGACTGTTTACAAGGATTCCAACTTACAC ACTCCCTTGGTGGAGGCACTGGATCTGGTATGGGAACACTTCTCATTTCC AAAATCCGTGAGGAATACCCTGACAGAATCATGAACACATTCAGTGTTGT CCCATCCCCAAAAGTCTCTGATACCGTTGTTGAACCATACAATGCTACCT TATCTGTCCATCAACTTGTCGAAAATACTGATGAAACCTTTTGTATCGAC AACGAGGCCTTATACGATATCTGCTTCAGAACCTTGAAATTAACAACACC TACCTATGGAGATCTCAACCATCTCGTTTCTGCCACCATGAGCGGTGTCA CCACATGTCTCCGATTCCCTGGTCAAGTAAGTATATTTCAAGTGTCTTTA CATTGGTGAAGTTATAAGGCTGAGTGAAATAGCTTTCTTACATACCACCA TAGGAGTGATTTGTTgtgttaattttcatttttagtcaGGTCAAAAACTA AAGCTAACTATAACTTTGAGAACTTTGATTGGTAAATACCAGTATTAAAT AATATCTCTTACTTGTCTATTCTAGTTGAATGCTGACCTCCGTAAATTAG CTGTCAACATGGTCCCATTCCCCCGTCTCCATTTCTTCATGCCTGGATTT GCACCATTGACCAGCCGTGGCTCGCAACAATACCGTGCCTTGACTGTCCC AGAATTGACCCAACAAATGTTCGATGCCAAGAACATGATGGCTGCCTGTG ATCCACGTCATGGACGATACTTGACCGTTGCTGCCATGTTCCGTGGTAGA ATGTCAATGAAGGAAGTTGATGAACAAATGTTGAATGTTCAAAACAAGAA CAGCTCATACTTCGTTGAATGGATTCCAAACAACGTCAAGACCGCTGTCT GTGATATCCCACCACGTGGATTGAAGATGTCTGCTACCTTCATTGGTAAC AGCACTGCCATCCAAGAATTGTTCAAACGTATCAGCGAACAATTCACTGC TATGTTCCGAAGAAAGGCTTTCTTGCATTGGTATACTGGTGAAGGTATGG ACGAAATGGAATTCACCGAAGCTGAATCCAACATGAATGATCTCGTCTCT GAATACCAACAATACCAAGATGCCACTGCTGATGATGAAGGAGAATTcga agaagaggaagaagaagatGCTGAATAAATTATgttctttttaacttttt gggatGTCTTTAATTGTATTTGTGCTAATTTGAAGACTGACTTTAATTTC TGTAAATAATACTTTTCTATTCCTGgtatttcatttcttttgaaaacatt ttcttcttataaatcaccttttcattaatttttgtgtttaaaaaataatc ttttttgtGAATCTGAATCTTTAGGGGAAATTTCGACCAACATTTCAGAA AACCGTTTTTCAGCTTACTTTTTGGAGacactcaatttttttaaggGCTA GTTATTAGTCACcacaacttgatttttttaacttttcgacttttttgata tatttaaaCTCATTTTTTCTGCCCCTCCAGCTAACAAACCTACATGAATC CCTGTCAGAATTCGACGTCCTTTCCCGATGGTTGGTCTGAACGTTATAAG AAAGTTTAGCCCAAAAAAAATAATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007472TCONS_00007472Clytia hemisphaericatranscript
TCONS_00007473TCONS_00007473Clytia hemisphaericatranscript
TCONS_00007474TCONS_00007474Clytia hemisphaericatranscript
TCONS_00007475TCONS_00007475Clytia hemisphaericatranscript
TCONS_00007476TCONS_00007476Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007474-proteinTCONS_00007474-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000077supercontigsc0000077:666494..669968 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TUBB4Btubulin beta-4B chain Homo Sapiens
TUBB4Atubulin beta-4A chain isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3760.1 3698.21 4560.47 4617.1 8547.08 6867.61 5660.45 5838.24 4378.38 4819.3 5140.08 5709.05 3559.87 3913.9 3347.82 3329.44 3220.64 3315.16 4120.75 3891.3 3105.88 3249.97 3752.75 3587.22 7817.07 6721.44 4202.07 4598.97 4000.65 3765.17