|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007474 ID=TCONS_00007474|Name=TCONS_00007474|organism=Clytia hemisphaerica|type=transcript|length=1962bp GGAactaattgaaaaatatatattttgaccCCCGGAAAGTTTTGACCCAT GGCAACTGAACACATGAAGATAAGGTCGCCTGTTTAACGTGAATTCAGAT CGAAATAGGCAGTGAAACACTGACagcataaattttcaaattctaggTGT TGTAACACGaactaatataatttcaaaatgagaGAAATCGTTCACTTGCA AGCTGGACAATGCGGTAACCAAATTGGTGCCAAGTTTTGGGAAGTCATCT CTGATGAACACGGTATCGACCCCACCGGAACCTACCATGGTGATTCAGAT TTGCAATTAGAAAGAATCAATGTATATTACAATGAGGCCACTGGTGGTAA ATATGTTCCAAGAGCTGTCCTTGTTGATTTGGAACCTGGAACTATGGATT CAGTTAGATCAGGACCTTTTGGACAAATTTTTAGACCAGATAATTTCGTT TTTGGACAATCAGGAGCCGGTAATAACTGGGCTAAAGGACATTATACTGA AGGTGCAGAGTTAGTAGACTCTGTTTTAGATGTTGTACGTAAAGAAGCTG AAAGCTGTGACTGTTTACAAGGATTCCAACTTACACACTCCCTTGGTGGA GGCACTGGATCTGGTATGGGAACACTTCTCATTTCCAAAATCCGTGAGGA ATACCCTGACAGAATCATGAACACATTCAGTGTTGTCCCATCCCCAAAAG TCTCTGATACCGTTGTTGAACCATACAATGCTACCTTATCTGTCCATCAA CTTGTCGAAAATACTGATGAAACCTTTTGTATCGACAACGAGGCCTTATA CGATATCTGCTTCAGAACCTTGAAATTAACAACACCTACCTATGGAGATC TCAACCATCTCGTTTCTGCCACCATGAGCGGTGTCACCACCTGTCTCCGA TTCCCTGGTCAATTGAATGCTGACCTCCGTAAATTAGCTGTCAACATGGT CCCATTCCCCCGTCTCCATTTCTTCATGCCTGGATTTGCACCATTGACCA GCCGTGGCTCGCAACAATACCGTGCCTTGACTGTCCCAGAATTGACCCAA CAAATGTTCGATGCCAAGAACATGATGGCTGCCTGTGATCCACGTCATGG ACGATACTTGACCGTTGCTGCCATGTTCCGTGGTAGAATGTCAATGAAGG AAGTTGATGAACAAATGTTGAATGTTCAAAACAAGAACAGCTCATACTTC GTTGAATGGATTCCAAACAACGTCAAGACCGCTGTCTGTGATATCCCACC ACGTGGATTGAAGATGTCTGCTACCTTCATTGGTAACAGCACTGCCATCC AAGAATTGTTCAAACGTATCAGCGAACAATTCACTGCTATGTTCCGAAGA AAGGCTTTCTTGCATTGGTATACTGGTGAAGGTATGGACGAAATGGAATT CACCGAAGCTGAATCCAACATGAATGATCTCGTCTCTGAATACCAACAAT ACCAAGATGCCACTGCTGATGATGAAGGAGAATTcgaagaagaggaagaa gaagatGCTGAATAAATTATgttctttttaactttttgggatGTCTTTAA TTGTATTTGTGCTAATTTGAAGACTGACTTTAATTTCTGTAAATAATACT TTTCTATTCCTGgtatttcatttcttttgaaaacattttcttcttataaa tcaccttttcattaatttttgtgtttaaaaaataatcttttttgtGAATC TGAATCTTTAGGGGAAATTTCGACCAACATTTCAGAAAACCGTTTTTCAG CTTACTTTTTGGAGacactcaatttttttaaggGCTAGTTATTAGTCACc acaacttgatttttttaacttttcgacttttttgatatatttaaaCTCAT TTTTTCTGCCCCTCCAGCTAACAAACCTACATGAATCCCTGTCAGAATTC GACGTCCTTTCCCGATGGTTGGTCTGAACGTTATAAGAAAGTTTAGCCCA AAAAAAATAATC Run BLAST on NCBI protein sequence of TCONS_00007474-protein >TCONS_00007474-protein ID=TCONS_00007474-protein|Name=TCONS_00007474-protein|organism=Clytia hemisphaerica|type=polypeptide|length=445bp
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVY YNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNN WAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL LISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETF CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADL RKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM AACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVK TAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG EGMDEMEFTEAESNMNDLVSEYQQYQDATADDEGEFEEEEEEDAE Run BLAST on NCBI transcript from alignment at sc0000077:666494..669968+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007474 ID=TCONS_00007474|Name=TCONS_00007474|organism=Clytia hemisphaerica|type=transcript|length=3475bp|location=Sequence derived from alignment at sc0000077:666494..669968+ (Clytia hemisphaerica) GGAactaattgaaaaatatatattttgaccCCCGGAAAGTTTTGACCCAT
GGCAACTGAACACATGAAGATAAGGTCGCCTGTTTAACGTGAATTCAGAT
CGAAATAGGCAGTGAAACACTGACagcataaattttcaaattctaggTGT
TGTAACACGaactaatataatttcaaaatgagaGAAATCGTTCACTTGCA
AGCTGGACAATGCGGTAACCAAATTGGTGCCAAGGTATGTGCCTTTTGTT
TTTTTCCCCCGCTTTTCGTCCTATttttttgtgagtttttgaaTCAATAT
GCATTTTCTGAGATGCttagaaaactaaaaaaacgtCTCTTTACTTTTGT
AGTTTTGGGAAGTCATCTCTGATGAACACGGTATCGACCCCACCGGAACC
TACCATGGTGATTCAGATTTGCAATTAGAAAGAATCAATGTATATTACAA
TGAGGCCACTGGtaagttttgattttcttcatGCCACTCCCACCTAAGGA
TGCTTTATTGCAATAATACGTAATGTTATCTGAGgcttgaaatatcttta
tttaaGTTAACAAGGCAAATTGCATCCTCCTGTCCTGCTTGTGCTTCAGA
CTGATCATTTCTTTTGGAAACATTAGATGAGTCTTCATCAAATAAAGTAA
AGTTACAACGTAATAGGATAAAGTACTAAAGGATAtcaaatttgttcttt
tttcagGTGGTAAATATGTTCCAAGAGCTGTCCTTGTTGATTTGGAACCT
GGAACTATGGATTCAGTTAGATCAGGACCTTTTGGACAAATTTTTAGACC
AGATAATTTCGTTTTTGGACAATCAGGAGCCGGTAATAACTGGGCTAAAG
GACATTATACTGAAGGTGCAGAGTTAGTAGACTCTGTTTTAGATGTTGTA
CGTAAAGAAGCTGAAAGCTGTGACTGTTTACAAGGATTCCAACTTACACA
CTCCCTTGGTGGAGGCACTGGATCTGGTATGGGAACACTTCTCATTTCCA
AAATCCGTGAGGAATACCCTGACAGAATCATGAACACATTCAGTGTTGTC
CCATCCCCAAAAGTCTCTGATACCGTTGTTGAACCATACAATGCTACCTT
ATCTGTCCATCAACTTGTCGAAAATACTGATGAAACCTTTTGTATCGACA
ACGAGGCCTTATACGATATCTGCTTCAGAACCTTGAAATTAACAACACCT
ACCTATGGAGATCTCAACCATCTCGTTTCTGCCACCATGAGCGGTGTCAC
CACCTGTCTCAGATTCCCTGGTCAAGTAAGTATATTTCAAGTGTCTTTAC
ATTGGTGAAGTTATAAGGCTGAGTGAAATAGCTTTCTTACATACCATCAT
AGGAGTGATTTGTTgtgttaattttcatttttagtcaGGTCAAAAACTAA
AGTTAACTATAATTTTGAGAACTTTGATTGGTAAATATCAGTATTAAATA
TATCTCTTACTTGTANATACGTAATGTTATCTGAGgcttgaaatatcttt
atttaaGTTAACAAGGCAAATTGCATCCTCCTGTCCTGCTTGTGCTTCAG
ACTGATCATTTCTTTTGGAAACATTAGATGAGTCTTCATCAAATAAAGTA
AAGTTACAACGTAATAGGATAAAGTACTAAAGGATAtcaaatttgttctt
ttttcagGTGGTAAATATGTTCCAAGAGCTGTCCTTGTTGATTTGGAACC
TGGAACTATGGATTCAGTTAGATCAGGACCTTTTGGACAAATTTTTAGAC
CAGATAATTTCGTTTTTGGACAATCAGGAGCCGGTAATAACTGGGCTAAA
GGACATTATACTGAAGGTGCAGAGTTAGTAGACTCTGTTTTAGATGTTGT
ACGTAAAGAAGCTGAAAGCTGTGACTGTTTACAAGGATTCCAACTTACAC
ACTCCCTTGGTGGAGGCACTGGATCTGGTATGGGAACACTTCTCATTTCC
AAAATCCGTGAGGAATACCCTGACAGAATCATGAACACATTCAGTGTTGT
CCCATCCCCAAAAGTCTCTGATACCGTTGTTGAACCATACAATGCTACCT
TATCTGTCCATCAACTTGTCGAAAATACTGATGAAACCTTTTGTATCGAC
AACGAGGCCTTATACGATATCTGCTTCAGAACCTTGAAATTAACAACACC
TACCTATGGAGATCTCAACCATCTCGTTTCTGCCACCATGAGCGGTGTCA
CCACATGTCTCCGATTCCCTGGTCAAGTAAGTATATTTCAAGTGTCTTTA
CATTGGTGAAGTTATAAGGCTGAGTGAAATAGCTTTCTTACATACCACCA
TAGGAGTGATTTGTTgtgttaattttcatttttagtcaGGTCAAAAACTA
AAGCTAACTATAACTTTGAGAACTTTGATTGGTAAATACCAGTATTAAAT
AATATCTCTTACTTGTCTATTCTAGTTGAATGCTGACCTCCGTAAATTAG
CTGTCAACATGGTCCCATTCCCCCGTCTCCATTTCTTCATGCCTGGATTT
GCACCATTGACCAGCCGTGGCTCGCAACAATACCGTGCCTTGACTGTCCC
AGAATTGACCCAACAAATGTTCGATGCCAAGAACATGATGGCTGCCTGTG
ATCCACGTCATGGACGATACTTGACCGTTGCTGCCATGTTCCGTGGTAGA
ATGTCAATGAAGGAAGTTGATGAACAAATGTTGAATGTTCAAAACAAGAA
CAGCTCATACTTCGTTGAATGGATTCCAAACAACGTCAAGACCGCTGTCT
GTGATATCCCACCACGTGGATTGAAGATGTCTGCTACCTTCATTGGTAAC
AGCACTGCCATCCAAGAATTGTTCAAACGTATCAGCGAACAATTCACTGC
TATGTTCCGAAGAAAGGCTTTCTTGCATTGGTATACTGGTGAAGGTATGG
ACGAAATGGAATTCACCGAAGCTGAATCCAACATGAATGATCTCGTCTCT
GAATACCAACAATACCAAGATGCCACTGCTGATGATGAAGGAGAATTcga
agaagaggaagaagaagatGCTGAATAAATTATgttctttttaacttttt
gggatGTCTTTAATTGTATTTGTGCTAATTTGAAGACTGACTTTAATTTC
TGTAAATAATACTTTTCTATTCCTGgtatttcatttcttttgaaaacatt
ttcttcttataaatcaccttttcattaatttttgtgtttaaaaaataatc
ttttttgtGAATCTGAATCTTTAGGGGAAATTTCGACCAACATTTCAGAA
AACCGTTTTTCAGCTTACTTTTTGGAGacactcaatttttttaaggGCTA
GTTATTAGTCACcacaacttgatttttttaacttttcgacttttttgata
tatttaaaCTCATTTTTTCTGCCCCTCCAGCTAACAAACCTACATGAATC
CCTGTCAGAATTCGACGTCCTTTCCCGATGGTTGGTCTGAACGTTATAAG
AAAGTTTAGCCCAAAAAAAATAATC Coding sequence (CDS) from alignment at sc0000077:666494..669968+ >TCONS_00007474 ID=TCONS_00007474|Name=TCONS_00007474|organism=Clytia hemisphaerica|type=CDS|length=6690bp|location=Sequence derived from alignment at sc0000077:666494..669968+ (Clytia hemisphaerica) atgagaGAAATCGTTCACTTGCAAGCTGGACAATGCGGTAACCAAATTGG TGCCAAGTTTTGGGAAGTCATCTCTGATGAACACGGTATCGACCCCACCG GAACCTACCATGGTGATTCAGATTTGCAATTAGAAAGAATCAATGTATAT TACAATGAGGCCACTGGTGGTAAATATGTTCCAAGAGCTGTCCTTGTTGA TTTGGAACCTGGAACTATGGATTCAGTTAGATCAGGACCTTTTGGACAAA TTTTTAGACCAGATAATTTCGTTTTTGGACAATCAGGAGCCGGTAATAAC TGGGCTAAAGGACATTATACTGAAGGTGCAGAGTTAGTAGACTCTGTTTT AGATGTTGTACGTAAAGAAGCTGAAAGCTGTGACTGTTTACAAGGATTCC AACTTACACACTCCCTTGGTGGAGGCACTGGATCTGGTATGGGAACACTT CTCATTTCCAAAATCCGTGAGGAATACCCTGACAGAATCATGAACACATT CAGTGTTGTCCCATCCCCAAAAGTCTCTGATACCGTTGTTGAACCATACA ATGCTACCTTATCTGTCCATCAACTTGTCGAAAATACTGATGAAACCTTT TGTATCGACAACGAGGCCTTATACGATATCTGCTTCAGAACCTTGAAATT AACAACACCTACCTATGGAGATCTCAACCATCTCGTTTCTGCCACCATGA GCGGTGTCACCACCTGTCTCCGATTCCCTGGTCAATTGAATGCTGACCTC CGTAAATTAGCTGTCAACATGGTCCCATTCCCCCGTCTCCATTTCTTCAT GCCTGGATTTGCACCATTGACCAGCCGTGGCTCGCAACAATACCGTGCCT TGACTGTCCCAGAATTGACCCAACAAATGTTCGATGCCAAGAACATGATG GCTGCCTGTGATCCACGTCATGGACGATACTTGACCGTTGCTGCCATGTT CCGTGGTAGAATGTCAATGAAGGAAGTTGATGAACAAATGTTGAATGTTC AAAACAAGAACAGCTCATACTTCGTTGAATGGATTCCAAACAACGTCAAG ACCGCTGTCTGTGATATCCCACCACGTGGATTGAAGATGTCTGCTACCTT CATTGGTAACAGCACTGCCATCCAAGAATTGTTCAAACGTATCAGCGAAC AATTCACTGCTATGTTCCGAAGAAAGGCTTTCTTGCATTGGTATACTGGT GAAGGTATGGACGAAATGGAATTCACCGAAGCTGAATCCAACATGAATGA TCTCGTCTCTGAATACCAACAATACCAAGATGCCACTGCTGATGATGAAG GAGAATTcgaagaagaggaagaagaagatGCTGAATAAatgagaGAAATC GTTCACTTGCAAGCTGGACAATGCGGTAACCAAATTGGTGCCAAGTTTTG GGAAGTCATCTCTGATGAACACGGTATCGACCCCACCGGAACCTACCATG GTGATTCAGATTTGCAATTAGAAAGAATCAATGTATATTACAATGAGGCC ACTGGTGGTAAATATGTTCCAAGAGCTGTCCTTGTTGATTTGGAACCTGG AACTATGGATTCAGTTAGATCAGGACCTTTTGGACAAATTTTTAGACCAG ATAATTTCGTTTTTGGACAATCAGGAGCCGGTAATAACTGGGCTAAAGGA CATTATACTGAAGGTGCAGAGTTAGTAGACTCTGTTTTAGATGTTGTACG TAAAGAAGCTGAAAGCTGTGACTGTTTACAAGGATTCCAACTTACACACT CCCTTGGTGGAGGCACTGGATCTGGTATGGGAACACTTCTCATTTCCAAA ATCCGTGAGGAATACCCTGACAGAATCATGAACACATTCAGTGTTGTCCC ATCCCCAAAAGTCTCTGATACCGTTGTTGAACCATACAATGCTACCTTAT CTGTCCATCAACTTGTCGAAAATACTGATGAAACCTTTTGTATCGACAAC GAGGCCTTATACGATATCTGCTTCAGAACCTTGAAATTAACAACACCTAC CTATGGAGATCTCAACCATCTCGTTTCTGCCACCATGAGCGGTGTCACCA CCTGTCTCCGATTCCCTGGTCAATTGAATGCTGACCTCCGTAAATTAGCT GTCAACATGGTCCCATTCCCCCGTCTCCATTTCTTCATGCCTGGATTTGC ACCATTGACCAGCCGTGGCTCGCAACAATACCGTGCCTTGACTGTCCCAG AATTGACCCAACAAATGTTCGATGCCAAGAACATGATGGCTGCCTGTGAT CCACGTCATGGACGATACTTGACCGTTGCTGCCATGTTCCGTGGTAGAAT GTCAATGAAGGAAGTTGATGAACAAATGTTGAATGTTCAAAACAAGAACA GCTCATACTTCGTTGAATGGATTCCAAACAACGTCAAGACCGCTGTCTGT GATATCCCACCACGTGGATTGAAGATGTCTGCTACCTTCATTGGTAACAG CACTGCCATCCAAGAATTGTTCAAACGTATCAGCGAACAATTCACTGCTA TGTTCCGAAGAAAGGCTTTCTTGCATTGGTATACTGGTGAAGGTATGGAC GAAATGGAATTCACCGAAGCTGAATCCAACATGAATGATCTCGTCTCTGA ATACCAACAATACCAAGATGCCACTGCTGATGATGAAGGAGAATTcgaag aagaggaagaagaagatGCTGAATAAatgagaGAAATCGTTCACTTGCAA GCTGGACAATGCGGTAACCAAATTGGTGCCAAGTTTTGGGAAGTCATCTC TGATGAACACGGTATCGACCCCACCGGAACCTACCATGGTGATTCAGATT TGCAATTAGAAAGAATCAATGTATATTACAATGAGGCCACTGGTGGTAAA TATGTTCCAAGAGCTGTCCTTGTTGATTTGGAACCTGGAACTATGGATTC AGTTAGATCAGGACCTTTTGGACAAATTTTTAGACCAGATAATTTCGTTT TTGGACAATCAGGAGCCGGTAATAACTGGGCTAAAGGACATTATACTGAA GGTGCAGAGTTAGTAGACTCTGTTTTAGATGTTGTACGTAAAGAAGCTGA AAGCTGTGACTGTTTACAAGGATTCCAACTTACACACTCCCTTGGTGGAG GCACTGGATCTGGTATGGGAACACTTCTCATTTCCAAAATCCGTGAGGAA TACCCTGACAGAATCATGAACACATTCAGTGTTGTCCCATCCCCAAAAGT CTCTGATACCGTTGTTGAACCATACAATGCTACCTTATCTGTCCATCAAC TTGTCGAAAATACTGATGAAACCTTTTGTATCGACAACGAGGCCTTATAC GATATCTGCTTCAGAACCTTGAAATTAACAACACCTACCTATGGAGATCT CAACCATCTCGTTTCTGCCACCATGAGCGGTGTCACCACCTGTCTCCGAT TCCCTGGTCAATTGAATGCTGACCTCCGTAAATTAGCTGTCAACATGGTC CCATTCCCCCGTCTCCATTTCTTCATGCCTGGATTTGCACCATTGACCAG CCGTGGCTCGCAACAATACCGTGCCTTGACTGTCCCAGAATTGACCCAAC AAATGTTCGATGCCAAGAACATGATGGCTGCCTGTGATCCACGTCATGGA CGATACTTGACCGTTGCTGCCATGTTCCGTGGTAGAATGTCAATGAAGGA AGTTGATGAACAAATGTTGAATGTTCAAAACAAGAACAGCTCATACTTCG TTGAATGGATTCCAAACAACGTCAAGACCGCTGTCTGTGATATCCCACCA CGTGGATTGAAGATGTCTGCTACCTTCATTGGTAACAGCACTGCCATCCA AGAATTGTTCAAACGTATCAGCGAACAATTCACTGCTATGTTCCGAAGAA AGGCTTTCTTGCATTGGTATACTGGTGAAGGTATGGACGAAATGGAATTC ACCGAAGCTGAATCCAACATGAATGATCTCGTCTCTGAATACCAACAATA CCAAGATGCCACTGCTGATGATGAAGGAGAATTcgaagaagaggaagaag aagatGCTGAATAAatgagaGAAATCGTTCACTTGCAAGCTGGACAATGC GGTAACCAAATTGGTGCCAAGTTTTGGGAAGTCATCTCTGATGAACACGG TATCGACCCCACCGGAACCTACCATGGTGATTCAGATTTGCAATTAGAAA GAATCAATGTATATTACAATGAGGCCACTGGTGGTAAATATGTTCCAAGA GCTGTCCTTGTTGATTTGGAACCTGGAACTATGGATTCAGTTAGATCAGG ACCTTTTGGACAAATTTTTAGACCAGATAATTTCGTTTTTGGACAATCAG GAGCCGGTAATAACTGGGCTAAAGGACATTATACTGAAGGTGCAGAGTTA GTAGACTCTGTTTTAGATGTTGTACGTAAAGAAGCTGAAAGCTGTGACTG TTTACAAGGATTCCAACTTACACACTCCCTTGGTGGAGGCACTGGATCTG GTATGGGAACACTTCTCATTTCCAAAATCCGTGAGGAATACCCTGACAGA ATCATGAACACATTCAGTGTTGTCCCATCCCCAAAAGTCTCTGATACCGT TGTTGAACCATACAATGCTACCTTATCTGTCCATCAACTTGTCGAAAATA CTGATGAAACCTTTTGTATCGACAACGAGGCCTTATACGATATCTGCTTC AGAACCTTGAAATTAACAACACCTACCTATGGAGATCTCAACCATCTCGT TTCTGCCACCATGAGCGGTGTCACCACCTGTCTCCGATTCCCTGGTCAAT TGAATGCTGACCTCCGTAAATTAGCTGTCAACATGGTCCCATTCCCCCGT CTCCATTTCTTCATGCCTGGATTTGCACCATTGACCAGCCGTGGCTCGCA ACAATACCGTGCCTTGACTGTCCCAGAATTGACCCAACAAATGTTCGATG CCAAGAACATGATGGCTGCCTGTGATCCACGTCATGGACGATACTTGACC GTTGCTGCCATGTTCCGTGGTAGAATGTCAATGAAGGAAGTTGATGAACA AATGTTGAATGTTCAAAACAAGAACAGCTCATACTTCGTTGAATGGATTC CAAACAACGTCAAGACCGCTGTCTGTGATATCCCACCACGTGGATTGAAG ATGTCTGCTACCTTCATTGGTAACAGCACTGCCATCCAAGAATTGTTCAA ACGTATCAGCGAACAATTCACTGCTATGTTCCGAAGAAAGGCTTTCTTGC ATTGGTATACTGGTGAAGGTATGGACGAAATGGAATTCACCGAAGCTGAA TCCAACATGAATGATCTCGTCTCTGAATACCAACAATACCAAGATGCCAC TGCTGATGATGAAGGAGAATTcgaagaagaggaagaagaagatGCTGAAT AAatgagaGAAATCGTTCACTTGCAAGCTGGACAATGCGGTAACCAAATT GGTGCCAAGTTTTGGGAAGTCATCTCTGATGAACACGGTATCGACCCCAC CGGAACCTACCATGGTGATTCAGATTTGCAATTAGAAAGAATCAATGTAT ATTACAATGAGGCCACTGGTGGTAAATATGTTCCAAGAGCTGTCCTTGTT GATTTGGAACCTGGAACTATGGATTCAGTTAGATCAGGACCTTTTGGACA AATTTTTAGACCAGATAATTTCGTTTTTGGACAATCAGGAGCCGGTAATA ACTGGGCTAAAGGACATTATACTGAAGGTGCAGAGTTAGTAGACTCTGTT TTAGATGTTGTACGTAAAGAAGCTGAAAGCTGTGACTGTTTACAAGGATT CCAACTTACACACTCCCTTGGTGGAGGCACTGGATCTGGTATGGGAACAC TTCTCATTTCCAAAATCCGTGAGGAATACCCTGACAGAATCATGAACACA TTCAGTGTTGTCCCATCCCCAAAAGTCTCTGATACCGTTGTTGAACCATA CAATGCTACCTTATCTGTCCATCAACTTGTCGAAAATACTGATGAAACCT TTTGTATCGACAACGAGGCCTTATACGATATCTGCTTCAGAACCTTGAAA TTAACAACACCTACCTATGGAGATCTCAACCATCTCGTTTCTGCCACCAT GAGCGGTGTCACCACCTGTCTCCGATTCCCTGGTCAATTGAATGCTGACC TCCGTAAATTAGCTGTCAACATGGTCCCATTCCCCCGTCTCCATTTCTTC ATGCCTGGATTTGCACCATTGACCAGCCGTGGCTCGCAACAATACCGTGC CTTGACTGTCCCAGAATTGACCCAACAAATGTTCGATGCCAAGAACATGA TGGCTGCCTGTGATCCACGTCATGGACGATACTTGACCGTTGCTGCCATG TTCCGTGGTAGAATGTCAATGAAGGAAGTTGATGAACAAATGTTGAATGT TCAAAACAAGAACAGCTCATACTTCGTTGAATGGATTCCAAACAACGTCA AGACCGCTGTCTGTGATATCCCACCACGTGGATTGAAGATGTCTGCTACC TTCATTGGTAACAGCACTGCCATCCAAGAATTGTTCAAACGTATCAGCGA ACAATTCACTGCTATGTTCCGAAGAAAGGCTTTCTTGCATTGGTATACTG GTGAAGGTATGGACGAAATGGAATTCACCGAAGCTGAATCCAACATGAAT GATCTCGTCTCTGAATACCAACAATACCAAGATGCCACTGCTGATGATGA AGGAGAATTcgaagaagaggaagaagaagatGCTGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00007474-exon-sc0000077-1491911889:666494..666727 | TCONS_00007474-exon-sc0000077-1491911889:666494..666727 | Clytia hemisphaerica | exon |
TCONS_00007474-exon-sc0000077-1510915933:666494..666727 | TCONS_00007474-exon-sc0000077-1510915933:666494..666727 | Clytia hemisphaerica | exon |
TCONS_00007474-exon-sc0000077-1575043694:666494..666727 | TCONS_00007474-exon-sc0000077-1575043694:666494..666727 | Clytia hemisphaerica | exon |
TCONS_00007474-exon-sc0000077-1491911889:666846..666954 | TCONS_00007474-exon-sc0000077-1491911889:666846..666954 | Clytia hemisphaerica | exon |
TCONS_00007474-exon-sc0000077-1510915933:666846..666954 | TCONS_00007474-exon-sc0000077-1510915933:666846..666954 | Clytia hemisphaerica | exon |
TCONS_00007474-exon-sc0000077-1575043694:666846..666954 | TCONS_00007474-exon-sc0000077-1575043694:666846..666954 | Clytia hemisphaerica | exon |
TCONS_00007474-exon-sc0000077-1491911889:667200..667748 | TCONS_00007474-exon-sc0000077-1491911889:667200..667748 | Clytia hemisphaerica | exon |
TCONS_00007474-exon-sc0000077-1510915933:667200..667748 | TCONS_00007474-exon-sc0000077-1510915933:667200..667748 | Clytia hemisphaerica | exon |
TCONS_00007474-exon-sc0000077-1575043694:667200..667748 | TCONS_00007474-exon-sc0000077-1575043694:667200..667748 | Clytia hemisphaerica | exon |
TCONS_00007474-exon-sc0000077-1491911889:668700..668719 | TCONS_00007474-exon-sc0000077-1491911889:668700..668719 | Clytia hemisphaerica | exon |
TCONS_00007474-exon-sc0000077-1510915933:668700..668719 | TCONS_00007474-exon-sc0000077-1510915933:668700..668719 | Clytia hemisphaerica | exon |
TCONS_00007474-exon-sc0000077-1575043694:668700..668719 | TCONS_00007474-exon-sc0000077-1575043694:668700..668719 | Clytia hemisphaerica | exon |
TCONS_00007474-exon-sc0000077-1491911889:668919..669968 | TCONS_00007474-exon-sc0000077-1491911889:668919..669968 | Clytia hemisphaerica | exon |
TCONS_00007474-exon-sc0000077-1510915933:668919..669968 | TCONS_00007474-exon-sc0000077-1510915933:668919..669968 | Clytia hemisphaerica | exon |
TCONS_00007474-exon-sc0000077-1575043694:668919..669968 | TCONS_00007474-exon-sc0000077-1575043694:668919..669968 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000077 | supercontig | sc0000077:666494..669968 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
Term | Definition |
GO:0007017 | microtubule-based process |
Vocabulary: Cellular Component
Term | Definition |
GO:0005874 | microtubule |
Vocabulary: Molecular Function
Term | Definition |
GO:0005200 | structural constituent of cytoskeleton |
GO:0005525 | GTP binding |
GO:0003924 | GTPase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0007017 |
microtubule-based process |
cellular_component |
GO:0005874 |
microtubule |
molecular_function |
GO:0003924 |
GTPase activity |
molecular_function |
GO:0005525 |
GTP binding |
molecular_function |
GO:0005200 |
structural constituent of cytoskeleton |
Blast
BLAST of TCONS_00007474 vs. Swiss-Prot (Human)
Match: TBB4B (Tubulin beta-4B chain OS=Homo sapiens GN=TUBB4B PE=1 SV=1) HSP 1 Score: 851.662 bits (2199), Expect = 0.000e+0 Identity = 424/426 (99.53%), Postives = 426/426 (100.00%), Query Frame = 1
Query: 178 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 1455
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
The following BLAST results are available for this feature:
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