XLOC_003372 (gene) - C. hemisphaerica

Overview


Name	XLOC_003372
Unique Name	XLOC_003372
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000061:474224..487068-

gene from alignment at sc0000061:474224..487068-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_003372 ID=XLOC_003372|Name=XLOC_003372|organism=Clytia hemisphaerica|type=gene|length=12845bp|location=Sequence derived from alignment at sc0000061:474224..487068- (Clytia hemisphaerica)
GTTGGTAACAAAGAAGAAATACGAAGAAAGATACAGGAATAAAGAAAAAC
ATACACAGAGAGACATCATGGTTCACCATTCAACAGAAAGACACCGTGGT
TTCAGCATTGATGCAATTCTTGGCAAAACAGAAACTAAAATTTACGAAAA
AGAAAATTCAAGTAAGTGCGGGAATTCATATTTTTCACATCTGTTTCGCA
TCATTTATACAGATACAGTATACCCGTTAGCAGGCTGCATTACAAATTTC
TAAACATTAGAAATGCAACGGAAATGAGACTCTTGTTGGAAGAACCAAAT
GTATCAATTTTTTGGAAGGCTTCACCTTCACTAGAAGCTCATGGATGTCA
GAGAGTGATATAAAGGACTGTGACATTATAGCGTCTAAAGGCACAGGGTC
CACGCCACCGGGGTCACTTTTTTGCTAAGTAAAAATTTTTGGCTGCGTCT
CCTTTCATTGGCCTTTCACTTACAATTTCATGGCGCTCTGAAGGTATTAC
CCTCCGTTGCATAATTTCAACTTCCTTTATATCCCGCTCTGCGCTATAAC
TGGGTAGAAAAAAGAAACTTAGAAAATTATGGGATAATGATACATAATGA
ACTTATACTTTCAAAGGAAGAATATTGAAGGTTGGTTTAAATCAAGTGTC
TCGTGAGATTTGAACTAAAAAACTGATTCACATCCAATTAAATCTTTTAT
AAGAATTAGAAAACTAAACGAGAAAAAACAAATTTTGTAACGTAAAAACT
TAAAAAATCTTTGAATTATTGAGAAAGCCTAGATAGATAGTCTTAAAATC
CAGCAGACTCAACAACAAAGTGGTTGAGAAACTCTTAAGTTATACTTTTT
CAGCAAAATACTATTTCAAAGCAATATACAAAATTTGTAAATTTTCTTAC
AAAAAAAACGAAGCACATGCAGCAGTATCAGAGATTAATTATGGTTAAAA
AAACTATCCAATTAGAGGATTGATATTTAATTGATTGTGATACGCATCTG
TTAATTAGATGACCCATTAAATACCAATTAATTTGACATTATAACCACAG
AATCCTATTAACTATGCTAAATTTATAAACTTTTTGCTTACCTTTTTTGC
ATGAAATATGATTTTAATTATCCCCCTTGTACTGATGAATGGCGTTAGCA
CACGCTGTAAATTGATTTTATTGCTTTTTGGCTTGAAAATTAATATTTTT
GCGGATTTGATATACTGTACTGCTGATAGATTTATGGTTATTAAAGGTAA
TTATTGGCTCTATTTAGGCCTGAAAATTTGGTTCCGAAATATATTGCCTA
GGTATAAATCGTTTTCAGGGAAGCTTATTTTTTATCAAAATTCTCCCCAA
AACTGTTTGGTTGATTCAATAAACTGTAAACCATTAAAGTCATCTATAGT
CATTCTCATTTAAGTTTAATTTGTTCCTAAAAAACATTGATCTTGTGTTC
GCCAAAACTAATAATTAATTACCCATCCTTCTATTGTTTTTTAATTCGCG
TTTCATTGAATTTCAAAATGAACCAATCAAATCGTTTTACGTGATAGCAA
GTGGATGCGCAATAGAAAATCAATAATATATCCTTTTTTATAATTGGTTC
ATTTCCTTTGTTGCACACAGCCATTAATTAAACTGTTAAATATTATTAAT
TAAAACTGCTGCAAATAATGATACCCACCACACGAGATAATAGGTTATTG
TTTCAAGATTGGTTTATAAGACCAGACTTCGGGTAATAGAAGACTTTAAA
ACTTTAAAACTAAGCTTTTGGAGGATTTGTGATTAATTGATAAATATTCA
GTTATTCATGTTGAGCTATGATAAAAATGGTCCTACCTAGGAGTAAAATT
TATGATAACTAGGTAAAATTTTCTGCGATTTTTCATATGGTATTAATCAT
GCTATATTAATAAGTTTAATGTAAAAGTGAAAATTAATTCAAAAGAATTA
GAGGATTCATAATCAATTAGCGGTGTTATTTGAAGTGCAATTGATGTGAG
ATTTCCGCGTGCACATACCAATATTTGGGACTAATTTCAAATTACAAAAT
TTCATTTTTGTATGATTTATATATTGATTTGCTGATGCCAATAATTTGAT
TCACACAACTATTAAAAAAACAATTTAATTTAAGTAATTTTTTTCGCTAA
GTTTTTCCCACCGCAAAAGGCAATTTTAATGAATTAGTTGTTTTTCATGC
ATATTGATTTTATTCAAAATACAAATTAGTATGTAATTGCTTAGGTTTGT
ATAATCATTGACAATCAAATTTTATTTTAGTTGGTATTGGCCTTACATAA
AAATACTAAAACTTCGAGCAAAGTAGTCCCAATTAGGCAACTTACAAAAC
ATACGTCAAAATTCAAAATAACAGGACATTAAATTTTCCCTGTTTAGGAT
TTAAGGAAATTTGGAGTGCTAAGAATTTATTATCCCATCTTTAACCCATT
TCAAATTTATGAAAAAAATACTCTGAGAAAATACTCTGAGAAAAAAAACA
TGATTTAGTTTGATTTATACAGAAAAAAGGATTGCAAAGTCTCCAAATTT
AAAAAAATGAAAACACCAAAAAATGAAAACACCCAAAATGAAAACTTCAA
ATAATTTGAATGCACAGGGTGTGGTAAAAAAATTTCATTTTTCATTTTCG
TTTTCAGATGGAAGTGAAGTCGATTCACTTGACGATAAAGAAGACTTAGA
AAAGCATTCAGACATCAGCAAAAAAGGCGACCTTTCCGATGATGATGACG
TCTTCTCATCATCCGACGAAAAAAATGACGGCGACAAACCTAGAAAATTA
CGACGTAGCCGAACAACATTCACGACATACCAACTACATCAGTTAGAAAG
AGCTTTTGATAAGACACAATATCCAGATGTTTTTACAAGGGAAGATTTAG
CATTGAGATTGGACCTAAGCGAAGCAAGAGTTCAGGTAAGATTCAAATGA
ATTTTCTTTTCGTATAAACAGTGCCTTAATTAATATTTTTACCTTGCATA
CAGATTAAGAAATATACAGACTAAGGAATTTAAGATCCTCCTCGCGTTTA
GTTAAGGTGGTAGTCTACCGAGAAATGGAAAATCATCGAAAAAATTGTCG
AATTTTGGTTTTTGGGTGTTTTGAGATCCTTAGGTCTTTCTGAACATCTC
CTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNCTATTCAGAAAACCTGACACAAGCAAAAT
AAAGTATTTTACCCCCTGACTGATTTTACCCCCGTCTTTGGTTATTTTTA
GAATTTTTTTTTATTTTTAGAAATGTTATGAGTTGATATACATTTCCTGA
AAATTTCATTACGAAATGTAAAGAAGTTCTTGAGTTATTGCAAAAAATGT
GATTTTTTGACTTTTGAAATCTGGCGGTAGACTACCACCTTAAGATAATT
GCTTATTTATAACTATAGTTTAAATGATAATTATGAGTATCTTCTCGATT
TTGGAATATCATTTCAAGATAAAAGGCATACGAGACTTTAGCGTTGAGAA
CCCATGCCTTATAAGTTAAGGGAGAGTTAGGACCCCAGGTATAGTAAAAT
AGGGAATCGTTATACCACAAATACTATTTTGAGAATATTTGAAGCTATAT
GGGTAATTTGGGTTAGAAACAAACAAACAAAATATAATTAGATGGTTTGT
TAATGGATCTCACGATAAAAGAAAACCTAGTGAGATCAACTTTATAACAC
GACAGGTATCAAGAGTTTAGCCCCGCCATGCCATACCTCTTGTATTATAA
TCGTTAATTACCCTATCAATAGCAGATTAATTAAAGTCTTAAACCCAGAT
TAATTAGAGGGGAGTTAATTACTAACAGATATACTAATGAATTTTCTCCT
TCTTATTTCGTCTTTTATTAATTTGTTCACTAGACGATCGTTGTTATTGA
GCTCGTTAAGTAGGTTTTTATTGATCTTAATTGAATTTTTATTGACGGCC
TTAATTACTTTTTTTATTGAGAAAGGGAAGTACAGTGGAGTTAATCATAT
TAACCTTTTTTTGTTTTAATTTCAATAAAGTTAAATCAATAAACTTCAAT
TAATTAAGGTGTTAATCCATATTTTTAATTTAAATTTCCTTTTTGCTTCA
AATACTTTGAGAAGGTTTAAGTGAAACATTAATCAAAAAAAAAAGCATTG
TGGACAAAATTTGACTGAATTTTAAATTAGACATACTGTTTGATATTTAA
GGATCTCCAAAAAATTAACCTTTCCAGCGCGCAACTTTTTAAATTTTCAC
GCTGTCAGCGCGCAACATTTTTTCAGAAAATAGACATGTTCAGTTATTTG
ATCATAACTCAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNTCAAAACATTACATCACCATATATCAAAAGAAAGCTTAGAACCTCTAC
TTTCCGTTTCTCTTTACTTCTACGGCTAGCAAAGAAGCCAATGGGAGAAA
TATAACTTAGAAGATCACTATGTCAAAAAGACGACTATACTCGTCCGCCG
GAACGTATGCTCGACGACTATACTCGTCCGCCGGGCTGAAAAGGTTAAGC
AAATTAAAGCAATCTTGAAAATCATATACATAAATCATGTATTCTTATAA
AAACGATATCATTATATATTAGATTTCCTATTAGACGGTATTAGGGGCTC
ATTAATTATCTATACCTGTTGATTTTAAAGAGATTTTTCTTTAATTAATT
TCAATTGGTTATGAGGTCAAGAAAATCTTAATTAGAATCAATTGAAATTC
CAATAGAATTAAATGATCTTAACGAGGTCTTAAATCGCTTAAGTTTTATT
TGTTTGTTTATATATTGGTCTTTAAAGCTTCTTTTAGTAGTGGCCCTTTT
TAAGTGGCTTAAAATTACTCGATTAATTAGAGCCATTGAGCCATTGCCTA
TTCTCGATTTCGGTATTGTAGTTTCTTGTCATTTTTTTCCAAACTGAGGC
TGGGCATGTTCTTACAATGTTTATAACTTTTCGACGAATTGCAGCCTAAA
TCTTATGAACTGGGTTCTAATAAAAAATCAACGTATATTTTAGGATAAAA
TAATCGAAAAGGTCAATGAGGCGAGATAGTAATATATTTATAATAAGTTC
GGCCTTTAAATCGTCACAAATATGATATATGGTTTGTGCATTTCGATTGA
AATTGCATAACTTTGTCATTGAATTGTTTCAATTTCTCAATTTAAGCCTC
TAAACTGAGTCGTTTCCAGAATCTTACGTCAATCGAACGTTGAAAAACTG
TAACATTCTGAACTTGGATTTAAATCCTTTTAAATAGAAAATCTCAGTGT
GGCACCCTGCCAAATTGAATATGATAAAGTTCTTTTTTGAAAACAAAACA
GTCAAGTCAGGGTGTTCAACTCTTTGAAGATTAAATTCCTGTAGTGCCCC
CTTTTAACCTTTTACACAAAATGTGTGGACTTTATTGAAGCAAAAATGTC
GTTGAAAAATTAAATTAAATTCTATTCGGCCATATAATAGGCGGAAAAAG
TGGTAAATTCTTTTGTTAATTCTCAACAGTGCACAGTTAAGATTTTAATA
TTAACTTTTTTTATGAGAGTAAAGTTGGTTTAAAAAANGCAGTTAAGATT
TTTAATATTAACTTTTTTTATGAGAGTTGGTTTAAAAAAGAAAACCTAGG
GATGATTTAAATGATTGACACAAATTTCGATACCTTTGAAAATGTATACT
GGGTGTACTAAATGTTAATATAATCTGGTTATTAATATAGAAGCAACAGA
ACTGTGAAACAAAACTGTGTGTATGTCGCCTGACATGTCCAGCTAATGGC
ATACGTTTTTCAATGTAAATGCTGTGTACACTAATAGACCTATTATGTCT
GCCCAAGCTTGACGCTTTTTCATGTCTTTTTATTTAGCTGTTGATATATC
TAGCGTTTCTTTTGCACGCGAGTCGATGCCGCTAGATATGTTCAGAAAAC
TAGGTTGCATTTACTTAGGCATTAAAACAACCCTATCTCGTAAATGGCAA
ATTAAAGCATTTTTGACCGGGGACAGCCAAGTAAATTTTACATTTATTTT
CAAACCATTTTTGAGATCTAGCACACCCCTGTGTCACAGACCCGCTGGGG
CCCAAGCCCCACTGGAAAATTTGGTAAAAATTTCGTCCCCGGTGGGAAAA
GTACCTTAGAATTTCAGCCCCACTGAGAAATTGACTTTGATTTCATCCCC
ATTCGAAATTCATTGCTTAGAAATTCCCCTCCAAAACCATCCCCACTGGA
TTTGTCAACCTTGGAACAAAGGAATTTCTATCCCCAATGAGATTTCAATC
GAAATTTTTATCCCAGCTGTAGGAAAAAGTTTCACCGGGGCTGTGAGACA
GGGGTGTTCTAGAATAGATTATGGTGCCATATGCATTGAATTCTGTTTAA
AGGCAGTTAGAAAAGATAATTCGATCCCACCTACTACAGAATACTATATG
AAAAATCAAAAATCTCTGGTTAAGCAATTATTATGTCAAGCAGGGGACTT
ACAAATGCTAAGTCTTATTAATTTTCATTGCACTTATTGACTTAATAAGT
ATTATACGATTAGGATCATGGACTGATGTTTTAGCAGAATTAAAATGATC
GACGAGAAATGAGATTAAGACAAACTGTCAAATTTTCTTATCGTGGGTTT
GAATTCTCTTATTACATTGTTATTTCTAAAGAATCAATAAATTTTTGTCG
AGGCTTAATTGTTCTTATTGCTTGGAATTTTTAGCCTTAAATTGTTCTTA
TTCTGTTCTTGTTTAGGCGTTTTAGGCTTTTCACTCTTATTTTTAATGCT
AAAATACTTGAAATTCAGCATTGTCAGGCTTTGAGCTTCATTCATTCGTT
CTTATAAAATTGTTCTTAAGAAAATAGGATTAACACAAACTGTCAATTTT
TTTATGATTTCTAATTATATAAAAACTTCAACTTTTGAAAAATTGGCATA
TTCTCCTGCTTAATCTCTATTAATTGAATCTAGATAATTGTTTTTTTAAC
TTATCATTATTGCTTTGAAATGACCTAATATTGGTTTCGCGATTGGTTAT
GAAATGATTAATTGATTAGGATTAGATGAGTATAAACCACTTAGTAAAAT
TCCTTTGAATTTCATTAAAAAAACTATAAAGGTATTCCAAGTACATGTTT
TTTTATATAAGAACAAACTATATAAGAACATAAGGCTTCGATTGCCAAAA
AGGTAAGAACAAGTAAAGAACATTTTAAGGGTTTGCAGACTCTTAAATGG
CCAATTTTTAAAGAAAATGGACAAAAATGCTCACAAAATGGTGAAAATAA
GAACATCCTAAGAATTCAAATTTTTCAGATGTTCTTATACAAAAAACGTG
TAAAAGTTATCTTGCCTGAATTTTTCATAATTCAGCTAAAAAGAAGTTAT
TTGATAATAAAAATCAATGGAAAACACATTTTTAGGGAAACAAGATTTTC
ATTCACGCAAAATTTATGTTATTAAGCAGATTTAAGGATTAATCGTAGCA
AAATAATCTCTAAAATTAGGATTCTGATTTTATTAATCATCTTAGCAAAT
CAAAGAATATTTGTTCTTATGAGCTGATTAAGAGTTTTATCCTTAGAATC
TTTAACCCCGATTAGCACACGTGTTAAATTCCCACACATTGCGAAAAAAA
TTATGTTTTTGAATATTTTTTCTGATATAATAATCCTAATCTCAAATCAA
AACTTCAAATTATTTTTATTATTTTATAATTTGAAAAAATATTATTTCAT
GAAATCTGTCGTAATCTGACAATATGCAATTTTACAATAAATTTTATTGA
TTTTGTCTTTTAAGTAGATTTATTATATAGATTTTTGAGGTTTGGTTTTA
CGAATGAAATGAGTTTTTTGAATTTATTTAAAAATAGCACCTAATTGCCA
CAAAGTGACGGATTCAAAAAATGGATTATTTAAATCAGAACAGTGTTCTT
AACCCCTATAAACCAATAAAGCAATCAAATCTATACAACTTCATTAAATC
CATAATTATAATTATAACAGTCAGGAAGTATTAAAAGATTGATAAGACTT
TAATCTAAAATTTGATCTGATATATGCCAAAAAGGATTATTAATTGTGAT
TGTGATTAAACCATTTAAATTGTATTTTATTCAGTTTAGAAAGTATAGGT
CAGTTGGGCTACTTAAAAGGAATATTCCCTTAGTACAGACAAGGTCAACC
CTATGTACTTTTGTTAGAAAGGGGCCTCTACTCTAGGTATACGATAACCC
TCGTTTTCTATCCTTTTAGGTTTGGTTTCAAAATCGACGTGCGAAATGGA
GAAAACGCGAGAAGCAATCACCGGAAGGCAATTTTCATCATTCACCACAC
GATCTAATGCCACGCCCGTTAAATGAATTTCCACCACCGCCCCATTTCCA
CCATGGTTTACACCCTTCTGCCACTTCACCAATTCTACATTCTCCACCTA
GTATCATGATCCCGTCTAGACATCATCCATACAGAAACTCAGTCTCACCA
CCAGTACACCCTTGTTCGCCTTGTGATAAACGTCCACCGAGTTTCGGCGC
CCCACCATTGAGCCCACCCATCGGTTATTGCTACCCACCTAATGGCGGCC
CACCCCGCCCAAGATTAGATAGTTCAACGTATTATAAAAACTTGGAAAAA
GAATTTTTAGAAATGAAAAAATCCAGTATTAACGAACTTAGATTCCGCGC
ACATGAACACCACGGACCATTTATCGATCTTGCTCACCCAATCAGAAGAT
AGTAAATAAACCACTCGTCCAATCAAATGGCTAGTATTTTTTTTAATGAT
CCAATCGAAACAGACCCATGGTACATCACCGTCCAATCAATACAACAGAT
TCGAATGTTTTGTTTTTGAACAACAAAATCTTTCATGAAAAAGAAAAACG
AAAACAAATTTTTACATCATCAAAACATTGAACAAACACGACTTGCGATG
TCTGAGCTTTGGGAATTCCTTTTTAATTTGAATTTTTGTTTTTCCTAATT
TTTTTGTGTGTAAAATGTTTTTAAGTGTTATCCATCTTGTAATTTATCAA
AACTCTATTATTTTTCAAAGAGTTTATTATGGTCGATCGGTTATATTGGA
CCCAAAGGAAACTCTGCCCATCGACGGGGATGCGCCACTTAGGCTAAAAA
TGTTGACCTATTTCTTTGTCAAAATTAGCCGAGACGAGTGACTCTGAGTG
GGACTGAAATCCCAAAATTTTCTCCTAATTTTCCTAATTTTTATCAAATA
AGGCACTGTACGAAGGGACTAATATCTCAACTTTTTGAAAAAAGGCTCCC
ATGTCTCTTATTGACCAAAAAAAAGCGATTATATGTTAAACTATTGGTGA
ATCCTTGAGCTAAGATTTAGTACAAGGTTATCCTAGCCTCTTCCCCGTGT
ATTCCAGGCTTTATTTACGTTATAGATGGTCCCTTATGGAGCATCATTTT
TATAACCATAAATAAGTCGAATAATACACAGGGAATCCTTTACAACTATT
AACCATTCTGCATTCTGCATTCTGTTTTGTTTGTTCTTATAATGTTCTTC
AATTAGTGTTCTTGTTATAATTGTGTTCTTAGTCAATTTCAGTAAAGAAG
ATTGAATTTGTAAATAAGAAAAAGATCCAATACAGGGAACAAAATGTAAA
TAGAATTTTCACTAATATAAGAAATGGTACGATGAAATTACAAAG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00005922	TCONS_00005922	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
Rx	TCONS_00005922-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000061	supercontig	sc0000061:474224..487068 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.3	0.08	0.19	0.21	0.14	0.02	90.21	99.53	53.17	50.94	18.02	21.87	5.71	6.26	1.86	2.61	18	10.65	3.85	2.91	10.34	9.34	3.19	5.09	6.3	9.05	8.46	6.9	0.02	0.02

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XLOC_003372 (gene) - C. hemisphaerica