XLOC_002850 (gene) - C. hemisphaerica

Overview
NameXLOC_002850
Unique NameXLOC_002850
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000050:63492..68699-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002850 ID=XLOC_002850|Name=XLOC_002850|organism=Clytia hemisphaerica|type=gene|length=5208bp|location=Sequence derived from alignment at sc0000050:63492..68699- (Clytia hemisphaerica)
AAAAGAAAAAGATTTAGAAAAGGATGGATGAAATATACGCAGCGATTAAG AAGAAGGATTTGACCTCCTTGTCCAACCTGATTACCAGCAAGAACATCAA CACATCTGACAAATCGAAACAAACACCTCTGACGTTAGCTTGCGAACAAG GTCATTTAGATGTCGTCAAGTTTCTCGTTGAAGATAAGAAAGCAAACGTA GATCGAAAAGATGGTAAATCAAATACACCTTTGTATGTAGCTTGTCTTGC CGATCACCGACCCATCATCACTTACTTGCTAGAGAAGAATGCGGATATCA ATAAACCGGCAAGGAATAACTTCACTCCTGTTTATGCTGCAGTTGAGAAA GATAATCTAGAGTTGCTTGAATATCTTGTGTCAGTCAAAGCTGATTTAAA TGCCAAATGTTCCAGAGGTGGATTAATCAGACACGCCTGCTGCAAATGTG ATGCACCAAAATGTTTCGATTACTTGTTAAAGAAGAAGCTTGATCTGAAC ACTTACCATGAACAATTGGAACAGTATCTTAGCTTTGAGCTGTCTTTCCA ATACCTTGCTCGACGAAAAGATGAAGCAAGAGCCAAAACCACCATGGAGT ACCTCAAAAAGCTACTCAAGGCGGGTGCAGATACATCACTCTTAAGTAAA ACCAAAGGTCGCGAAGAAACACCCCTTCATGTCGCTGCTAAATGTGTCGA CAATGAATTGATGTCAGTTCTATTGGAGCATGGTGCTAACGTGAACCAAA AATCTGCAAACGGTGCCACACCCTTGCTCTCTTTGTTTTTCTTGGAGCGT AGTAAGGACCCGAAAGCAGAAAGTGCACGCAAAGTGATGCCCATAGAATG TGTACAGACACTTTTCAAATACAAAGCTGACCCGAACATCCCGAATGCTG CCGGTGTTACACCGTTTCTCTACTTCATGTCGTCTTTTTTCTACGGCTTG AAGGAGGATGCCCAATTCCTAAAAATGTTCTTGGAAAATGGAGCGGACGT TAATGTCAGTGATTTTGCTGGTGAGAAACCGATCCATTTTGCAGCTGGTA AACAGGGCACGAAAGTCATTGATTGCATCAAGATGTTAGTTAGTCATGGG GCGGATATCAATACGCCTGATGGGAATGGTGAAAATGTCATCCACTTGGT TGCTAGAAGACAAGAGAGTAGCCGTATGTCCTTTTTTGAAGAACTGCCTT GGGATGTTTTGATTGAGAATGGTGCGAAGATTAAAGCTAACAAAGAAGGC GATTATCCTCATTTCGTAGCTTTTATGTCCAATCGATTTGAAGTCTTTAA ATCTATGCTTAAAAATGGTATTGACATCAATGTGCGAAACAAGAAAGGTG AAACATTTCTTCACATGTTGCTTCGACGATATATTGAAAACGGGGCAAGG TGGGGACAGGATCCAGTCGAAGAAACGATTCAACGCATGGCCAATTGCGA CGAACCTGCCGATTTTCCAAAATTTGACCTTTACCTCAAAGATAAGAAAG GTCAAGATTTTTATGATATTCTTATGAAAGGTGGTTACGGGTACAATTGG AAAAAGCAGTTTGATTTGTTGAAACAGAATGGCTATGATACACCAACATT AGACAGGTATGCAATTTTTATTTTCCTAAAGTGGACGTAAAGTTTTCCAA AAAAGATAGAGGTTTAGAAATCATGACAACTTTTTGGAATATTTGATAAT GGGGCCTCTGTGGTTCATTTCTGCTAATTTGAGTTGTTTTTGGCAGTTCT AGCCCTACTTCGATGGCTCTAACTTTTTCTCCAGCAAAAAAAATCTTCAT CCTCTACCTACTTGTTTTTAAATGCATACTTTTGAGACTACCTTAAATAA ATAATAATTGATATCTTTCGTTGCGTTCCAAAATCTTCCTGGTGAACTTT GATTTCAGGGAATATTATGTAAGTAACTCCCTATGTCGAATATTTAACCT TGACTTATAGATATTTGCTTTGTGCCCAATTTTATATTGTTTCTTTTATT TCAAAGGTGGAACCGTCGTATGCGAGAAGGCGATAACCCGGAAAATATGG ATGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGAT CTGAACACTTACCATGGACAATTGGAACAGTATCTTAGCTTTGAGCTGTC TTTCCAATACCTTGCTCGACGAAAAGATGAAGCAAGAGCCAAAACCACCA TGGAGTATCTCAAAAAGCTACTCAAGGCGGGTGCAGATACATCACTCTTA AGTAAAACCAAAGGTCGCGAAGAAACACCCCTTCATATCGCTGCTAAATG TGTCGACAATGAATTGATGTCAGTTCTATTGGAGCATGGTGCTAACGTGA ACCAAAAATCTGCAAACGGTGCCACACCCTTGCTCTCTTTGTTTTTCTTG GAGCGTAGTAAGGACCCGAAAGCAGAAAATGCACGCAAAGTGATGCCCAT AGAGTGTGTACAGACACTTTTCAAATACAAAGCTGACCCGAACATCCCGA ATGCTGCCGGTGTTACACCGTTTCTCTACTTCATGTCGTCTTTTTTCTAC GGCTTGAAGGAGGATGCCCAATTCCTAAAAATGTTCTTGGAAAATGGAGC GGACGTTAATGTCAGTGATTTTGCTGGTGAGAAACCGATCCATTTTGCAG CTGGTAAACAGGGCACGAAAGTCATTGATTGCATCAAGATGTTAGTTAGT CATGGGGCGGATATCAATACGCCTGATGGGAATGGTGAAAATGTCATCCA CTTGGTTGCTAGAAGACAAGAGAGTAGCCGTATGTCCTTTTTTGAAGAAC TGCCTTGGGATGTTTTGATTGAGAATGGTGCGAAGATTAAAGCTAACAAA GAAGGCGATTATCCTCATTTCGTAGCTTTTATGTCCAATCGATTTGAAGT CTTTAAATCTATGCTTAAAAATGGTATTGACATCAATGTGCGAAACAAGA AAGGTGAAACATTTCTTCACATGTTGCTTCGACGATATATTGAAAACGGG GCAAGGTGGGGACAGGATCCAGTCGAAGAAACGATTCAACGCATGGCCAA TTGCGACGATCCTGCCGATTTTCCAAAATTTGACCTTTACCTCAAAGATA AGAAAGGTCAAGATTTTTATGATATTCTTATGAAAGGTGGTTACGGGTAC AATTGGAGAAAGCAGTTTGATTTGTTGAAACAGAATGGCTATGATACACC AACATTAGACAGGTATGCAATTTTTATTTTCCTAAACTGGACGGATTTAG AAATCATGACAACTTTTTGGAATATTTGATAATGGTGCCTCTGTGGCTCA TTTCTGCTAATTTGAGTTGTTTTTGGCAGTTCTAGCCCTACTTCGATGGC TCTAACTTTTTCTCCAGCAAAAAAATTCTTCATCCTCTACTACTTGTTTT TAAATGCATACTTTTGAGACTACCTTAAATAAATAATAATTGATATCTTT TGTTGCGCTCCAAAATCTTCCTGATGAACTTTGAAGTAACTCCCTATGTC GAATATTTAACCTTGACTTTTAGATATTTGCTTTGTGCCCAATTTTATAT TGTTTCTTTTATTTCAAAGGTGGAACCGTCGTATGCGAGAAGGCGATAAC CCGGAAAATATGGATGTAAGTGGTGGTAGAGCTGCTGGCGGATTTGATTC GGTAAGACAGCTAGCATCTAGAGGTGCGCCTGCCCGAGGTGTTCCTTCGA GAGGTGCAGGCAACAGAGCTATGAAATTCGATATGGGATCCCAATCCAAA CGTACAACAGGTTCAAGACCAATTGCTGAACGATCGCCACTGACTCCTAC AAAATCACCGAAATCATCTCCTTCAAACGAAGTCAATAATGAGAAAAAGA CAGCCGGACCGCCTTTAAAAGCGACGCCGGAGACGGAACCGAAACCAGAA CCAGAGCCAGAACCGGAGCCAGAACCGGAGCCGGAACCAAAACAGGCGGA AGAGGCGGAAGAGGACGAAGACGCCCCAAAGGATGTGATGATTTCTTACA ACTGGGGTCACCAAGCAACGGCATTCAAGATACGTGATTACTTGCGCGAT AACAGCAAACTGTCCGTATGGATTGACACGGAGAAAATGTCAGGTGACAT TTACGGGAAAATGGCGCAAGCGGTTTACAAGTCCAAGGTTATTGTTATGT GTTTGAGTGAAAAGTATGAGATGTCGGATAATTGTAAGTTTGAGTACGAA TATGCTGCCAAGAAGAAGAAGAATTTTGTGCCAGTAATGGTTCAACCAGA TTATGAGCCGAGAGGAGGGTTCAGTTTGGATATGATTTTGGGAAGCAAGT TGTATTATGAGCTATTCGAGGAGAAAGACTTTAAGGAAAACATTCCGAAT GTTTTGAAAGCTATTCAAGGAGTTTTGGAAAAGATGTAAGTTCTAACGCT TCAGAATTTAGAAGACGATGGAGTTTTTTTGCTAATTATTACCTAGTTTA CATATTGATTGTACATACCGTGTGTTGTGTGTTATTTAGTATTAAGATTT TGTAGTCATGTTTTTATTAATGTTTATTTTTAGGGTTTCTTTAATAGATT TGTTAACATAAATTTTCTTTCTTTAGTACTCTATATGTAGGAGATGTGAG GGAGTTTCTAAACATCGACCAGAAATGGCGACCACGACAGGCGACCAGAT AAATTTGGGTTATCGAGTTTACCTGCTCTCTCCACCGTAGAGAACATCCA AATCGAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005034TCONS_00005034Clytia hemisphaericatranscript
TCONS_00005033TCONS_00005033Clytia hemisphaericatranscript
TCONS_00005032TCONS_00005032Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005034-proteinTCONS_00005034-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000050supercontigsc0000050:63492..68699 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.25 1.03 1.5 1.04 120.84 90.39 165.56 185 88.66 105.09 43.13 36.22 10.72 8.26 5.79 8.4 5.52 5.13 25.37 21.23 2.19 2.61 0.24 0.28 0.47 0.5 0.59 0.4 0.63 0.46