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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005034 ID=TCONS_00005034|Name=TCONS_00005034|organism=Clytia hemisphaerica|type=transcript|length=2745bp
aaaagaaaaagatttagaaaaggATGGATGAAATATACGCAGCGATTAAG
AAGAAGGATTTGACCTCCTTGTCCAACCTGATTACCAGCAAGAACATCAA
CACATCTGACAAATCGAAACAAACACCTCTGACGTTAGCTTGCGAACAAG
GTCATTTAGATGTCGTCAAGTTTCTCGTTGAAGATAAGAAAGCAAACGTA
GATCGAAAAGATGGTAAATCAAATACACCTTTGTATGTAGCTTGTCTTGC
CGATCACCGACCCATCATCACTTACTTGCTAGAGAAGAATGCGGATATCA
ATAAACCGGCAAGGAATAACTTCACTCCTGTTTATGCTGCAGTTGAGAAA
GATAATCTAGAGTTGCTTGAATATCTTGTGTCAGTCAAAGCTGATTTAAA
TGCCAAATGTTCCAGAGGTGGATTAATCAGACACGCCTGCTGCAAATGTG
ATGCACCAAAATGTTTCGATTACTTGTTAAAGAAGAAGCTTGATCTGAAC
ACTTACCATGAACAATTGGAACAGTATCTTAGCTTTGAGCTGTCTTTCCA
ATACCTTGCTCGACGAAAAGATGAAGCAAGAGCCAAAACCACCATGGAGT
ACCTCAAAAAGCTACTCAAGGCGGGTGCAGATACATCACTCTTAAGTAAA
ACCAAAGGTCGCGAAGAAACACCCCTTCATGTCGCTGCTAAATGTGTCGA
CAATGAATTGATGTCAGTTCTATTGGAGCATGGTGCTAACGTGAACCAAA
AATCTGCAAACGGTGCCACACCCTTGCTCTCTTTGTTTTTCTTGGAGCGT
AGTAAGGACCCGAAAGCAGAAAGTGCACGCAAAGTGATGCCCATAGAATG
TGTACAGACACTTTTCAAATACAAAGCTGACCCGAACATCCCGAATGCTG
CCGGTGTTACACCGTTTCTCTACTTCATGTCGTCTTTTTTCTACGGCTTG
AAGGAGGATGCCCAattcctaaaaatgttcttggaAAATGGAGCGGACGT
TAATGTCAGTGATTTTGCTGGTGAGAAACCGATCCATTTTGCAGCTGGTA
AACAGGGCACGAAAGTCATTGATTGCATCAAGATGTTAGTTAGTCATGGG
GCGGATATCAATACGCCTGATGGGAATGGTGAAAATGTCATCCACTTGGT
TGCTAGAAGACAAGAGAGTAGCCGTATGTCCTTTTTTGAAGAACTGCCTT
GGGATGTTTTGATTGAGAATGGTGCGAAGATTAAAGCTAACAAAGAAGGC
GATTATCCTCATTTCGTAGCTTTTATGTCCAATCGATTTGAAGTCTTTAA
ATCTATGCTTAAAAATGGTATTGACATCAATGTGCGAAACAAGAAAGGTG
AAACATTTCTTCACATGTTGCTTCGACGATATATTGAAAACGGGGCAAGG
TGGGGACAGGATCCAGTCGAAGAAACGATTCAACGCATGGCCAATTGCGA
CGAACCTGccgattttccaaaatttgaccTTTACCTCAAAGATAAGAAAG
GTCAAGATTtttatgatattcttatgaaagGTGGTTACGGGTACAATTGG
AAAAAGcagtttgatttgttgaaacaGAATGGCTATGATACACCAACATT
AGACAGgTGGAACCGTCGTATGCGAGAAGGCGATAACCCGGAAAATATGG
ATGTAAGTGGTGGTAGAGCTGCTGGCGGATTTGATTCGGTAAGACAGCTA
GCATCTAGAGGTGCGCCTGCCCGAGGTGTTCCTTCGAGAGGTGCAGGCAA
CAGAGCTATGAAATTCGATATGGGATCCCAATCCAAACGTACAACAGGTT
CAAGACCAATTGCTGAACGATCGCCACTGACTCCTACAAAATCACCGAAA
TCATCTCCTTCAAACGAAGTCAATAATGAGAAAAAGACAGCCGGACCGCC
TTTAAAAGCGACGCCGGAGACGGAACCGAAACCAGAACCAGAGCCAGAAC
CGGAGCCAGAACCGGAGCCGGAACCAAAACAGGCGGAAGAGGCGGAAGAG
GACGAAGACGCCCCAAAGGATGTGATGATTTCTTACAACTGGGGTCACCA
AGCAACGGCATTCAAGATACGTGATTACTTGCGCGATAACAGCAAACTGT
CCGTATGGATTGACACGGAGAAAATGTCAGGTGACATTTACGGGAAAATG
GCGCAAGCGGTTTACAAGTCCAAGGTTATTGTTATGTGTTTGAGTGAAAA
GTATGAGATGTCGGATAATTGTAAGTTTGAGTACGAATATGCTgccaaga
agaagaagaattttgTGCCAGTAATGGTTCAACCAGATTATGAGCCGAGA
GGAGGGTTCAGTTTGGATATGATTTTGGGAAGCAAGTTGTATTATGAGCT
ATTCGAGGAGAAAGACTTTAAGGAAAACATTCCGAATGTTTTGAAAGCTA
TTCAAGGAGTTTTGGAAAAGATGTAAGTTCTAACGCTTCAGAATTTAGAA
GACGATGGAGTTTTTTTGCTAATTATTACCTAGTTTACATATTGATTGTA
CATACCGTGTGTTGTGTGTTATTTAGTATTAAGATTTTGTAGTCATGTTT
TtattaatgtttatttttaggGTTTCTTTAATAGATTTGTTAacataaat
tttctttctttagtaCTCTATATGTAGGAGATGtgagggagtttctaaac
atcgaccagaaatggcgaccacgacaggcgaccagataaatttgggttat
cgagtttacctgctctctccaccgtagagaacatccaaatcgagt Run BLAST on NCBI protein sequence of TCONS_00005034-protein >TCONS_00005034-protein ID=TCONS_00005034-protein|Name=TCONS_00005034-protein|organism=Clytia hemisphaerica|type=polypeptide|length=800bp
MDEIYAAIKKKDLTSLSNLITSKNINTSDKSKQTPLTLACEQGHLDVVKF
LVEDKKANVDRKDGKSNTPLYVACLADHRPIITYLLEKNADINKPARNNF
TPVYAAVEKDNLELLEYLVSVKADLNAKCSRGGLIRHACCKCDAPKCFDY
LLKKKLDLNTYHEQLEQYLSFELSFQYLARRKDEARAKTTMEYLKKLLKA
GADTSLLSKTKGREETPLHVAAKCVDNELMSVLLEHGANVNQKSANGATP
LLSLFFLERSKDPKAESARKVMPIECVQTLFKYKADPNIPNAAGVTPFLY
FMSSFFYGLKEDAQFLKMFLENGADVNVSDFAGEKPIHFAAGKQGTKVID
CIKMLVSHGADINTPDGNGENVIHLVARRQESSRMSFFEELPWDVLIENG
AKIKANKEGDYPHFVAFMSNRFEVFKSMLKNGIDINVRNKKGETFLHMLL
RRYIENGARWGQDPVEETIQRMANCDEPADFPKFDLYLKDKKGQDFYDIL
MKGGYGYNWKKQFDLLKQNGYDTPTLDRWNRRMREGDNPENMDVSGGRAA
GGFDSVRQLASRGAPARGVPSRGAGNRAMKFDMGSQSKRTTGSRPIAERS
PLTPTKSPKSSPSNEVNNEKKTAGPPLKATPETEPKPEPEPEPEPEPEPE
PKQAEEAEEDEDAPKDVMISYNWGHQATAFKIRDYLRDNSKLSVWIDTEK
MSGDIYGKMAQAVYKSKVIVMCLSEKYEMSDNCKFEYEYAAKKKKNFVPV
MVQPDYEPRGGFSLDMILGSKLYYELFEEKDFKENIPNVLKAIQGVLEKM Run BLAST on NCBI transcript from alignment at sc0000050:63492..68699- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005034 ID=TCONS_00005034|Name=TCONS_00005034|organism=Clytia hemisphaerica|type=transcript|length=5208bp|location=Sequence derived from alignment at sc0000050:63492..68699- (Clytia hemisphaerica)
AAAAGAAAAAGATTTAGAAAAGGATGGATGAAATATACGCAGCGATTAAG
AAGAAGGATTTGACCTCCTTGTCCAACCTGATTACCAGCAAGAACATCAA
CACATCTGACAAATCGAAACAAACACCTCTGACGTTAGCTTGCGAACAAG
GTCATTTAGATGTCGTCAAGTTTCTCGTTGAAGATAAGAAAGCAAACGTA
GATCGAAAAGATGGTAAATCAAATACACCTTTGTATGTAGCTTGTCTTGC
CGATCACCGACCCATCATCACTTACTTGCTAGAGAAGAATGCGGATATCA
ATAAACCGGCAAGGAATAACTTCACTCCTGTTTATGCTGCAGTTGAGAAA
GATAATCTAGAGTTGCTTGAATATCTTGTGTCAGTCAAAGCTGATTTAAA
TGCCAAATGTTCCAGAGGTGGATTAATCAGACACGCCTGCTGCAAATGTG
ATGCACCAAAATGTTTCGATTACTTGTTAAAGAAGAAGCTTGATCTGAAC
ACTTACCATGAACAATTGGAACAGTATCTTAGCTTTGAGCTGTCTTTCCA
ATACCTTGCTCGACGAAAAGATGAAGCAAGAGCCAAAACCACCATGGAGT
ACCTCAAAAAGCTACTCAAGGCGGGTGCAGATACATCACTCTTAAGTAAA
ACCAAAGGTCGCGAAGAAACACCCCTTCATGTCGCTGCTAAATGTGTCGA
CAATGAATTGATGTCAGTTCTATTGGAGCATGGTGCTAACGTGAACCAAA
AATCTGCAAACGGTGCCACACCCTTGCTCTCTTTGTTTTTCTTGGAGCGT
AGTAAGGACCCGAAAGCAGAAAGTGCACGCAAAGTGATGCCCATAGAATG
TGTACAGACACTTTTCAAATACAAAGCTGACCCGAACATCCCGAATGCTG
CCGGTGTTACACCGTTTCTCTACTTCATGTCGTCTTTTTTCTACGGCTTG
AAGGAGGATGCCCAATTCCTAAAAATGTTCTTGGAAAATGGAGCGGACGT
TAATGTCAGTGATTTTGCTGGTGAGAAACCGATCCATTTTGCAGCTGGTA
AACAGGGCACGAAAGTCATTGATTGCATCAAGATGTTAGTTAGTCATGGG
GCGGATATCAATACGCCTGATGGGAATGGTGAAAATGTCATCCACTTGGT
TGCTAGAAGACAAGAGAGTAGCCGTATGTCCTTTTTTGAAGAACTGCCTT
GGGATGTTTTGATTGAGAATGGTGCGAAGATTAAAGCTAACAAAGAAGGC
GATTATCCTCATTTCGTAGCTTTTATGTCCAATCGATTTGAAGTCTTTAA
ATCTATGCTTAAAAATGGTATTGACATCAATGTGCGAAACAAGAAAGGTG
AAACATTTCTTCACATGTTGCTTCGACGATATATTGAAAACGGGGCAAGG
TGGGGACAGGATCCAGTCGAAGAAACGATTCAACGCATGGCCAATTGCGA
CGAACCTGCCGATTTTCCAAAATTTGACCTTTACCTCAAAGATAAGAAAG
GTCAAGATTTTTATGATATTCTTATGAAAGGTGGTTACGGGTACAATTGG
AAAAAGCAGTTTGATTTGTTGAAACAGAATGGCTATGATACACCAACATT
AGACAGGTATGCAATTTTTATTTTCCTAAAGTGGACGTAAAGTTTTCCAA
AAAAGATAGAGGTTTAGAAATCATGACAACTTTTTGGAATATTTGATAAT
GGGGCCTCTGTGGTTCATTTCTGCTAATTTGAGTTGTTTTTGGCAGTTCT
AGCCCTACTTCGATGGCTCTAACTTTTTCTCCAGCAAAAAAAATCTTCAT
CCTCTACCTACTTGTTTTTAAATGCATACTTTTGAGACTACCTTAAATAA
ATAATAATTGATATCTTTCGTTGCGTTCCAAAATCTTCCTGGTGAACTTT
GATTTCAGGGAATATTATGTAAGTAACTCCCTATGTCGAATATTTAACCT
TGACTTATAGATATTTGCTTTGTGCCCAATTTTATATTGTTTCTTTTATT
TCAAAGGTGGAACCGTCGTATGCGAGAAGGCGATAACCCGGAAAATATGG
ATGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGAT
CTGAACACTTACCATGGACAATTGGAACAGTATCTTAGCTTTGAGCTGTC
TTTCCAATACCTTGCTCGACGAAAAGATGAAGCAAGAGCCAAAACCACCA
TGGAGTATCTCAAAAAGCTACTCAAGGCGGGTGCAGATACATCACTCTTA
AGTAAAACCAAAGGTCGCGAAGAAACACCCCTTCATATCGCTGCTAAATG
TGTCGACAATGAATTGATGTCAGTTCTATTGGAGCATGGTGCTAACGTGA
ACCAAAAATCTGCAAACGGTGCCACACCCTTGCTCTCTTTGTTTTTCTTG
GAGCGTAGTAAGGACCCGAAAGCAGAAAATGCACGCAAAGTGATGCCCAT
AGAGTGTGTACAGACACTTTTCAAATACAAAGCTGACCCGAACATCCCGA
ATGCTGCCGGTGTTACACCGTTTCTCTACTTCATGTCGTCTTTTTTCTAC
GGCTTGAAGGAGGATGCCCAATTCCTAAAAATGTTCTTGGAAAATGGAGC
GGACGTTAATGTCAGTGATTTTGCTGGTGAGAAACCGATCCATTTTGCAG
CTGGTAAACAGGGCACGAAAGTCATTGATTGCATCAAGATGTTAGTTAGT
CATGGGGCGGATATCAATACGCCTGATGGGAATGGTGAAAATGTCATCCA
CTTGGTTGCTAGAAGACAAGAGAGTAGCCGTATGTCCTTTTTTGAAGAAC
TGCCTTGGGATGTTTTGATTGAGAATGGTGCGAAGATTAAAGCTAACAAA
GAAGGCGATTATCCTCATTTCGTAGCTTTTATGTCCAATCGATTTGAAGT
CTTTAAATCTATGCTTAAAAATGGTATTGACATCAATGTGCGAAACAAGA
AAGGTGAAACATTTCTTCACATGTTGCTTCGACGATATATTGAAAACGGG
GCAAGGTGGGGACAGGATCCAGTCGAAGAAACGATTCAACGCATGGCCAA
TTGCGACGATCCTGCCGATTTTCCAAAATTTGACCTTTACCTCAAAGATA
AGAAAGGTCAAGATTTTTATGATATTCTTATGAAAGGTGGTTACGGGTAC
AATTGGAGAAAGCAGTTTGATTTGTTGAAACAGAATGGCTATGATACACC
AACATTAGACAGGTATGCAATTTTTATTTTCCTAAACTGGACGGATTTAG
AAATCATGACAACTTTTTGGAATATTTGATAATGGTGCCTCTGTGGCTCA
TTTCTGCTAATTTGAGTTGTTTTTGGCAGTTCTAGCCCTACTTCGATGGC
TCTAACTTTTTCTCCAGCAAAAAAATTCTTCATCCTCTACTACTTGTTTT
TAAATGCATACTTTTGAGACTACCTTAAATAAATAATAATTGATATCTTT
TGTTGCGCTCCAAAATCTTCCTGATGAACTTTGAAGTAACTCCCTATGTC
GAATATTTAACCTTGACTTTTAGATATTTGCTTTGTGCCCAATTTTATAT
TGTTTCTTTTATTTCAAAGGTGGAACCGTCGTATGCGAGAAGGCGATAAC
CCGGAAAATATGGATGTAAGTGGTGGTAGAGCTGCTGGCGGATTTGATTC
GGTAAGACAGCTAGCATCTAGAGGTGCGCCTGCCCGAGGTGTTCCTTCGA
GAGGTGCAGGCAACAGAGCTATGAAATTCGATATGGGATCCCAATCCAAA
CGTACAACAGGTTCAAGACCAATTGCTGAACGATCGCCACTGACTCCTAC
AAAATCACCGAAATCATCTCCTTCAAACGAAGTCAATAATGAGAAAAAGA
CAGCCGGACCGCCTTTAAAAGCGACGCCGGAGACGGAACCGAAACCAGAA
CCAGAGCCAGAACCGGAGCCAGAACCGGAGCCGGAACCAAAACAGGCGGA
AGAGGCGGAAGAGGACGAAGACGCCCCAAAGGATGTGATGATTTCTTACA
ACTGGGGTCACCAAGCAACGGCATTCAAGATACGTGATTACTTGCGCGAT
AACAGCAAACTGTCCGTATGGATTGACACGGAGAAAATGTCAGGTGACAT
TTACGGGAAAATGGCGCAAGCGGTTTACAAGTCCAAGGTTATTGTTATGT
GTTTGAGTGAAAAGTATGAGATGTCGGATAATTGTAAGTTTGAGTACGAA
TATGCTGCCAAGAAGAAGAAGAATTTTGTGCCAGTAATGGTTCAACCAGA
TTATGAGCCGAGAGGAGGGTTCAGTTTGGATATGATTTTGGGAAGCAAGT
TGTATTATGAGCTATTCGAGGAGAAAGACTTTAAGGAAAACATTCCGAAT
GTTTTGAAAGCTATTCAAGGAGTTTTGGAAAAGATGTAAGTTCTAACGCT
TCAGAATTTAGAAGACGATGGAGTTTTTTTGCTAATTATTACCTAGTTTA
CATATTGATTGTACATACCGTGTGTTGTGTGTTATTTAGTATTAAGATTT
TGTAGTCATGTTTTTATTAATGTTTATTTTTAGGGTTTCTTTAATAGATT
TGTTAACATAAATTTTCTTTCTTTAGTACTCTATATGTAGGAGATGTGAG
GGAGTTTCTAAACATCGACCAGAAATGGCGACCACGACAGGCGACCAGAT
AAATTTGGGTTATCGAGTTTACCTGCTCTCTCCACCGTAGAGAACATCCA
AATCGAGT Coding sequence (CDS) from alignment at sc0000050:63492..68699- >TCONS_00005034 ID=TCONS_00005034|Name=TCONS_00005034|organism=Clytia hemisphaerica|type=CDS|length=7209bp|location=Sequence derived from alignment at sc0000050:63492..68699- (Clytia hemisphaerica)
GCGATAACCCGGAAAATATGGATGTAAGTGGTGGTAGAGCTGCTGGCGGA
TTTGATTCGGTAAGACAGCTAGCATCTAGAGGTGCGCCTGCCCGAGGTGT
TCCTTCGAGAGGTGCAGGCAACAGAGCTATGAAATTCGATATGGGATCCC
AATCCAAACGTACAACAGGTTCAAGACCAATTGCTGAACGATCGCCACTG
ACTCCTACAAAATCACCGAAATCATCTCCTTCAAACGAAGTCAATAATGA
GAAAAAGACAGCCGGACCGCCTTTAAAAGCGACGCCGGAGACGGAACCGA
AACCAGAACCAGAGCCAGAACCGGAGCCAGAACCGGAGCCGGAACCAAAA
CAGGCGGAAGAGGCGGAAGAGGACGAAGACGCCCCAAAGGATGTGATGAT
TTCTTACAACTGGGGTCACCAAGCAACGGCATTCAAGATACGTGATTACT
TGCGCGATAACAGCAAACTGTCCGTATGGATTGACACGGAGAAAATGTCA
GGTGACATTTACGGGAAAATGGCGCAAGCGGTTTACAAGTCCAAGGTTAT
TGTTATGTGTTTGAGTGAAAAGTATGAGATGTCGGATAATTGTAAGTTTG
AGTACGAATATGCTGCCAAGAAGAAGAAGAATTTTGTGCCAGTAATGGTT
CAACCAGATTATGAGCCGAGAGGAGGGTTCAGTTTGGATATGATTTTGGG
AAGCAAGTTGTATTATGAGCTATTCGAGGAGAAAGACTTTAAGGAAAACA
TTCCGAATGTTTTGAAAGCTATTCAAGGAGTTTTGGAAAAGATGTAAGTG
GAACCGTCGTATGCGAGAAGATGGATGAAATATACGCAGCGATTAAGAAG
AAGGATTTGACCTCCTTGTCCAACCTGATTACCAGCAAGAACATCAACAC
ATCTGACAAATCGAAACAAACACCTCTGACGTTAGCTTGCGAACAAGGTC
ATTTAGATGTCGTCAAGTTTCTCGTTGAAGATAAGAAAGCAAACGTAGAT
CGAAAAGATGGTAAATCAAATACACCTTTGTATGTAGCTTGTCTTGCCGA
TCACCGACCCATCATCACTTACTTGCTAGAGAAGAATGCGGATATCAATA
AACCGGCAAGGAATAACTTCACTCCTGTTTATGCTGCAGTTGAGAAAGAT
AATCTAGAGTTGCTTGAATATCTTGTGTCAGTCAAAGCTGATTTAAATGC
CAAATGTTCCAGAGGTGGATTAATCAGACACGCCTGCTGCAAATGTGATG
CACCAAAATGTTTCGATTACTTGTTAAAGAAGAAGCTTGATCTGAACACT
TACCATGAACAATTGGAACAGTATCTTAGCTTTGAGCTGTCTTTCCAATA
CCTTGCTCGACGAAAAGATGAAGCAAGAGCCAAAACCACCATGGAGTACC
TCAAAAAGCTACTCAAGGCGGGTGCAGATACATCACTCTTAAGTAAAACC
AAAGGTCGCGAAGAAACACCCCTTCATGTCGCTGCTAAATGTGTCGACAA
TGAATTGATGTCAGTTCTATTGGAGCATGGTGCTAACGTGAACCAAAAAT
CTGCAAACGGTGCCACACCCTTGCTCTCTTTGTTTTTCTTGGAGCGTAGT
AAGGACCCGAAAGCAGAAAGTGCACGCAAAGTGATGCCCATAGAATGTGT
ACAGACACTTTTCAAATACAAAGCTGACCCGAACATCCCGAATGCTGCCG
GTGTTACACCGTTTCTCTACTTCATGTCGTCTTTTTTCTACGGCTTGAAG
GAGGATGCCCAATTCCTAAAAATGTTCTTGGAAAATGGAGCGGACGTTAA
TGTCAGTGATTTTGCTGGTGAGAAACCGATCCATTTTGCAGCTGGTAAAC
AGGGCACGAAAGTCATTGATTGCATCAAGATGTTAGTTAGTCATGGGGCG
GATATCAATACGCCTGATGGGAATGGTGAAAATGTCATCCACTTGGTTGC
TAGAAGACAAGAGAGTAGCCGTATGTCCTTTTTTGAAGAACTGCCTTGGG
ATGTTTTGATTGAGAATGGTGCGAAGATTAAAGCTAACAAAGAAGGCGAT
TATCCTCATTTCGTAGCTTTTATGTCCAATCGATTTGAAGTCTTTAAATC
TATGCTTAAAAATGGTATTGACATCAATGTGCGAAACAAGAAAGGTGAAA
CATTTCTTCACATGTTGCTTCGACGATATATTGAAAACGGGGCAAGGTGG
GGACAGGATCCAGTCGAAGAAACGATTCAACGCATGGCCAATTGCGACGA
ACCTGCCGATTTTCCAAAATTTGACCTTTACCTCAAAGATAAGAAAGGTC
AAGATTTTTATGATATTCTTATGAAAGGTGGTTACGGGTACAATTGGAAA
AAGCAGTTTGATTTGTTGAAACAGAATGGCTATGATACACCAACATTAGA
CAGGCGATAACCCGGAAAATATGGATGTAAGTGGTGGTAGAGCTGCTGGC
GGATTTGATTCGGTAAGACAGCTAGCATCTAGAGGTGCGCCTGCCCGAGG
TGTTCCTTCGAGAGGTGCAGGCAACAGAGCTATGAAATTCGATATGGGAT
CCCAATCCAAACGTACAACAGGTTCAAGACCAATTGCTGAACGATCGCCA
CTGACTCCTACAAAATCACCGAAATCATCTCCTTCAAACGAAGTCAATAA
TGAGAAAAAGACAGCCGGACCGCCTTTAAAAGCGACGCCGGAGACGGAAC
CGAAACCAGAACCAGAGCCAGAACCGGAGCCAGAACCGGAGCCGGAACCA
AAACAGGCGGAAGAGGCGGAAGAGGACGAAGACGCCCCAAAGGATGTGAT
GATTTCTTACAACTGGGGTCACCAAGCAACGGCATTCAAGATACGTGATT
ACTTGCGCGATAACAGCAAACTGTCCGTATGGATTGACACGGAGAAAATG
TCAGGTGACATTTACGGGAAAATGGCGCAAGCGGTTTACAAGTCCAAGGT
TATTGTTATGTGTTTGAGTGAAAAGTATGAGATGTCGGATAATTGTAAGT
TTGAGTACGAATATGCTGCCAAGAAGAAGAAGAATTTTGTGCCAGTAATG
GTTCAACCAGATTATGAGCCGAGAGGAGGGTTCAGTTTGGATATGATTTT
GGGAAGCAAGTTGTATTATGAGCTATTCGAGGAGAAAGACTTTAAGGAAA
ACATTCCGAATGTTTTGAAAGCTATTCAAGGAGTTTTGGAAAAGATGTAA
GTGGAACCGTCGTATGCGAGAAGATGGATGAAATATACGCAGCGATTAAG
AAGAAGGATTTGACCTCCTTGTCCAACCTGATTACCAGCAAGAACATCAA
CACATCTGACAAATCGAAACAAACACCTCTGACGTTAGCTTGCGAACAAG
GTCATTTAGATGTCGTCAAGTTTCTCGTTGAAGATAAGAAAGCAAACGTA
GATCGAAAAGATGGTAAATCAAATACACCTTTGTATGTAGCTTGTCTTGC
CGATCACCGACCCATCATCACTTACTTGCTAGAGAAGAATGCGGATATCA
ATAAACCGGCAAGGAATAACTTCACTCCTGTTTATGCTGCAGTTGAGAAA
GATAATCTAGAGTTGCTTGAATATCTTGTGTCAGTCAAAGCTGATTTAAA
TGCCAAATGTTCCAGAGGTGGATTAATCAGACACGCCTGCTGCAAATGTG
ATGCACCAAAATGTTTCGATTACTTGTTAAAGAAGAAGCTTGATCTGAAC
ACTTACCATGAACAATTGGAACAGTATCTTAGCTTTGAGCTGTCTTTCCA
ATACCTTGCTCGACGAAAAGATGAAGCAAGAGCCAAAACCACCATGGAGT
ACCTCAAAAAGCTACTCAAGGCGGGTGCAGATACATCACTCTTAAGTAAA
ACCAAAGGTCGCGAAGAAACACCCCTTCATGTCGCTGCTAAATGTGTCGA
CAATGAATTGATGTCAGTTCTATTGGAGCATGGTGCTAACGTGAACCAAA
AATCTGCAAACGGTGCCACACCCTTGCTCTCTTTGTTTTTCTTGGAGCGT
AGTAAGGACCCGAAAGCAGAAAGTGCACGCAAAGTGATGCCCATAGAATG
TGTACAGACACTTTTCAAATACAAAGCTGACCCGAACATCCCGAATGCTG
CCGGTGTTACACCGTTTCTCTACTTCATGTCGTCTTTTTTCTACGGCTTG
AAGGAGGATGCCCAATTCCTAAAAATGTTCTTGGAAAATGGAGCGGACGT
TAATGTCAGTGATTTTGCTGGTGAGAAACCGATCCATTTTGCAGCTGGTA
AACAGGGCACGAAAGTCATTGATTGCATCAAGATGTTAGTTAGTCATGGG
GCGGATATCAATACGCCTGATGGGAATGGTGAAAATGTCATCCACTTGGT
TGCTAGAAGACAAGAGAGTAGCCGTATGTCCTTTTTTGAAGAACTGCCTT
GGGATGTTTTGATTGAGAATGGTGCGAAGATTAAAGCTAACAAAGAAGGC
GATTATCCTCATTTCGTAGCTTTTATGTCCAATCGATTTGAAGTCTTTAA
ATCTATGCTTAAAAATGGTATTGACATCAATGTGCGAAACAAGAAAGGTG
AAACATTTCTTCACATGTTGCTTCGACGATATATTGAAAACGGGGCAAGG
TGGGGACAGGATCCAGTCGAAGAAACGATTCAACGCATGGCCAATTGCGA
CGAACCTGCCGATTTTCCAAAATTTGACCTTTACCTCAAAGATAAGAAAG
GTCAAGATTTTTATGATATTCTTATGAAAGGTGGTTACGGGTACAATTGG
AAAAAGCAGTTTGATTTGTTGAAACAGAATGGCTATGATACACCAACATT
AGACAGGCGATAACCCGGAAAATATGGATGTAAGTGGTGGTAGAGCTGCT
GGCGGATTTGATTCGGTAAGACAGCTAGCATCTAGAGGTGCGCCTGCCCG
AGGTGTTCCTTCGAGAGGTGCAGGCAACAGAGCTATGAAATTCGATATGG
GATCCCAATCCAAACGTACAACAGGTTCAAGACCAATTGCTGAACGATCG
CCACTGACTCCTACAAAATCACCGAAATCATCTCCTTCAAACGAAGTCAA
TAATGAGAAAAAGACAGCCGGACCGCCTTTAAAAGCGACGCCGGAGACGG
AACCGAAACCAGAACCAGAGCCAGAACCGGAGCCAGAACCGGAGCCGGAA
CCAAAACAGGCGGAAGAGGCGGAAGAGGACGAAGACGCCCCAAAGGATGT
GATGATTTCTTACAACTGGGGTCACCAAGCAACGGCATTCAAGATACGTG
ATTACTTGCGCGATAACAGCAAACTGTCCGTATGGATTGACACGGAGAAA
ATGTCAGGTGACATTTACGGGAAAATGGCGCAAGCGGTTTACAAGTCCAA
GGTTATTGTTATGTGTTTGAGTGAAAAGTATGAGATGTCGGATAATTGTA
AGTTTGAGTACGAATATGCTGCCAAGAAGAAGAAGAATTTTGTGCCAGTA
ATGGTTCAACCAGATTATGAGCCGAGAGGAGGGTTCAGTTTGGATATGAT
TTTGGGAAGCAAGTTGTATTATGAGCTATTCGAGGAGAAAGACTTTAAGG
AAAACATTCCGAATGTTTTGAAAGCTATTCAAGGAGTTTTGGAAAAGATG
TAAGTGGAACCGTCGTATGCGAGAAGATGGATGAAATATACGCAGCGATT
AAGAAGAAGGATTTGACCTCCTTGTCCAACCTGATTACCAGCAAGAACAT
CAACACATCTGACAAATCGAAACAAACACCTCTGACGTTAGCTTGCGAAC
AAGGTCATTTAGATGTCGTCAAGTTTCTCGTTGAAGATAAGAAAGCAAAC
GTAGATCGAAAAGATGGTAAATCAAATACACCTTTGTATGTAGCTTGTCT
TGCCGATCACCGACCCATCATCACTTACTTGCTAGAGAAGAATGCGGATA
TCAATAAACCGGCAAGGAATAACTTCACTCCTGTTTATGCTGCAGTTGAG
AAAGATAATCTAGAGTTGCTTGAATATCTTGTGTCAGTCAAAGCTGATTT
AAATGCCAAATGTTCCAGAGGTGGATTAATCAGACACGCCTGCTGCAAAT
GTGATGCACCAAAATGTTTCGATTACTTGTTAAAGAAGAAGCTTGATCTG
AACACTTACCATGAACAATTGGAACAGTATCTTAGCTTTGAGCTGTCTTT
CCAATACCTTGCTCGACGAAAAGATGAAGCAAGAGCCAAAACCACCATGG
AGTACCTCAAAAAGCTACTCAAGGCGGGTGCAGATACATCACTCTTAAGT
AAAACCAAAGGTCGCGAAGAAACACCCCTTCATGTCGCTGCTAAATGTGT
CGACAATGAATTGATGTCAGTTCTATTGGAGCATGGTGCTAACGTGAACC
AAAAATCTGCAAACGGTGCCACACCCTTGCTCTCTTTGTTTTTCTTGGAG
CGTAGTAAGGACCCGAAAGCAGAAAGTGCACGCAAAGTGATGCCCATAGA
ATGTGTACAGACACTTTTCAAATACAAAGCTGACCCGAACATCCCGAATG
CTGCCGGTGTTACACCGTTTCTCTACTTCATGTCGTCTTTTTTCTACGGC
TTGAAGGAGGATGCCCAATTCCTAAAAATGTTCTTGGAAAATGGAGCGGA
CGTTAATGTCAGTGATTTTGCTGGTGAGAAACCGATCCATTTTGCAGCTG
GTAAACAGGGCACGAAAGTCATTGATTGCATCAAGATGTTAGTTAGTCAT
GGGGCGGATATCAATACGCCTGATGGGAATGGTGAAAATGTCATCCACTT
GGTTGCTAGAAGACAAGAGAGTAGCCGTATGTCCTTTTTTGAAGAACTGC
CTTGGGATGTTTTGATTGAGAATGGTGCGAAGATTAAAGCTAACAAAGAA
GGCGATTATCCTCATTTCGTAGCTTTTATGTCCAATCGATTTGAAGTCTT
TAAATCTATGCTTAAAAATGGTATTGACATCAATGTGCGAAACAAGAAAG
GTGAAACATTTCTTCACATGTTGCTTCGACGATATATTGAAAACGGGGCA
AGGTGGGGACAGGATCCAGTCGAAGAAACGATTCAACGCATGGCCAATTG
CGACGAACCTGCCGATTTTCCAAAATTTGACCTTTACCTCAAAGATAAGA
AAGGTCAAGATTTTTATGATATTCTTATGAAAGGTGGTTACGGGTACAAT
TGGAAAAAGCAGTTTGATTTGTTGAAACAGAATGGCTATGATACACCAAC
ATTAGACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005034-exon-sc0000050-1575043694:67094..68699 | TCONS_00005034-exon-sc0000050-1575043694:67094..68699 | Clytia hemisphaerica | exon |
| TCONS_00005034-exon-sc0000050-1575043694:66671..66693 | TCONS_00005034-exon-sc0000050-1575043694:66671..66693 | Clytia hemisphaerica | exon |
| TCONS_00005034-exon-sc0000050-1575043694:63492..64607 | TCONS_00005034-exon-sc0000050-1575043694:63492..64607 | Clytia hemisphaerica | exon |
| TCONS_00005034-exon-sc0000050-1510915933:67094..68699 | TCONS_00005034-exon-sc0000050-1510915933:67094..68699 | Clytia hemisphaerica | exon |
| TCONS_00005034-exon-sc0000050-1510915933:66671..66693 | TCONS_00005034-exon-sc0000050-1510915933:66671..66693 | Clytia hemisphaerica | exon |
| TCONS_00005034-exon-sc0000050-1510915933:63492..64607 | TCONS_00005034-exon-sc0000050-1510915933:63492..64607 | Clytia hemisphaerica | exon |
| TCONS_00005034-exon-sc0000050-1491911889:67094..68699 | TCONS_00005034-exon-sc0000050-1491911889:67094..68699 | Clytia hemisphaerica | exon |
| TCONS_00005034-exon-sc0000050-1491911889:66671..66693 | TCONS_00005034-exon-sc0000050-1491911889:66671..66693 | Clytia hemisphaerica | exon |
| TCONS_00005034-exon-sc0000050-1491911889:63492..64607 | TCONS_00005034-exon-sc0000050-1491911889:63492..64607 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000050 | supercontig | sc0000050:63492..68699 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007165 | signal transduction |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007165 |
signal transduction |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00005034 vs. Swiss-Prot (Human)
Match: ANK3 (Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 4.763e-27 Identity = 120/523 (22.94%), Postives = 221/523 (42.26%), Query Frame = 3
Query: 93 NINTSDKSKQTPLTLACEQGHLDVVKFLVEDKKANVDRKDGKSNTPLYVACLADHRPIITYLLEKNADINKPARNNFTPVYAAVEKDNLELLEYLVSVKADLNAKCSRGGLIRHACCKCDAPKCFDYLLKKKLDLNTYHEQLEQYL-------SFELSFQYLARRKDEARAK------------------TTMEYLKKLLKAGADTSLLSK------TKGREETPLHVAAKCVDNELMSVLLEHGANVNQKSANGATPL----------LSLFFLERSKDPKAESARKVMPIE---------CVQTLFKY---------------------------------KADPNIPNAAGVTPFLYFMSSFFYGLKEDAQFLKMFLENGADVNVSDFAGEKPIHFAA--GKQGTKVIDCIKMLVSHGADINTPDGNGENVIHLVARRQESSRMSFFEELPWDVLIENGAKIKANKEGDY-PHFVAFMSNRFEVFKSMLKNGIDINVRNKKGETFLHMLLRRYIENGARW 1403
+IN +++ L LA ++GH++VV L++ ++ANVD K NT L++A LA ++ L+ A++N ++N FTP+Y A ++++LE++++L+ A + G F L + L H+Q+ L L ++A RKD+ +A T + T LL++ T + TPLHVA+K + ++ +LL+ GA ++ K+ +G TPL + L+R+ +++ + P+ CVQ L ++ KA+PN G TP K + +++ L++GA + +G PIH AA G ++ + L+ HGA NT + GE +H+ AR ++ + + L+++GA+++A + D P ++ + ++ + +L+ G N G T LH+ R E+ A +
Sbjct: 66 DINICNQNGLNALHLASKEGHVEVVSELLQ-REANVDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATEDG---------------FTPL---AVALQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQNDNNADVESKSGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKNGLSPLHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKANPNAKALNGFTPL------HIACKKNRIKVMELLLKHGASIQAVTESGLTPIHVAAFMGH-----VNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRY--------LVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDVAAF 550
The following BLAST results are available for this feature:
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