XLOC_002847 (gene) - C. hemisphaerica

Overview
NameXLOC_002847
Unique NameXLOC_002847
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000050:21887..27707-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002847 ID=XLOC_002847|Name=XLOC_002847|organism=Clytia hemisphaerica|type=gene|length=5821bp|location=Sequence derived from alignment at sc0000050:21887..27707- (Clytia hemisphaerica)
ACCTGGTGTGTAGCTGAGAATAGTGGAACTTTAAAGATTTGAGAAGATTG TTCCTACCCTTTTTGTTTTGTTTTCTTATACTGTCATGCTTTTATACCGA GTAGAAAATTGCTAAGTGCGATGGTGCGATTACCTAATAATTGACCATGT AAGTGGGCCCTAAATAAGAAATAGAACGTTTTGGAACAAATAGAATGTTT TTGCTTCTTTTTTTTCTTCCTTGTTGTGTCACGTGATCGAAAAATTCTTT TGTACAGCGCGCGAACATCTATACCCGGGGGTAATGACAAATTTAAAACA CGGTTTTATTCACGATTTAGGCTATTTAAAAAGTCTCTGAAATTTTTATT ACTTATTGAGTCTCCTGATGTTTCACTTTAGAAATTAGTATTTTGATAAC TCTCGATAACTTTTACTATCAAAGGAATAAATTACTTTACAACCCCCGTC TCGATTTGCAATGATTATAGGTATATTCCCAAGCTACTCAAAAGTGTCAA TGACATTTGTGTTCATTCAGAAAGCGCGACAAAGAAAACAAAACCACAAA CAAGCCTTTTGAGGATAACTGCCCCAATTTCTCATGCATGGATAGATTTT ATAATTGAGGGATCTGCACTTGAATTTGACACATCAGAAGAAAACAGAGA AACGAACGTTGTTGGTCATCAAAGATAGTAAAGGAGTGGCAAAATTTGTT AGAAAATGGTTTGGAAAAACTTTTTCTTTTACTACTACTTTGCATTTTTT ACTGTTCAACCAAGTTTTTTACGGGTTTGTCCTCAAATATGAGTATTTCT CAAAGGTGATTGAGTGACTAGATAAGTTTAGCAAGTGACGTTTCTTCTGT GTACTTCTCATTACATTATCAATTTAAAGTTTTTTGTTTTTTTTAGTAAA TTCGTGTTTTAGCCTATTTACAATTTTCTTTCAGGCTGATGTTGTAAAGT ACGGTATCCAAATTCCTAATCGTGTTTTTGTCGGTGGAGTTGCCTTTGAC GTATGTATTGATTGTTATCTTTTTGTTATTATTTCCTCTGCTCTCTAGAA TTCGAGCATTATTCTTCATGATTAGATCTTCAACGACCTAAAAAAAGGTC CAATTGAATAGTAGAGCGTCGTTTAGGAGATTTTATTGTTGACACGAAGA CTTTCAATATTATCGAATAATGGAGGGTATCGAATAGTAGAATGTCGAAT AAGAGTGTCAACTGTAATATGTATCGATTTAAAAGCTCGAAAAGTTTTTT CCGCAATCATAAGTGCATTTTACACCCGAAGTGCACTCCCAGAAGCAAAC TTTTATTTTGTTCGTGGTTGCACCCTCCCTGTTTCTACATATACCCGTGG CCTGTTTTATTCATTCACTCATTCATTCATTCGTGGTGCTCTTTTCTTCC ATGTAGACAAAGGAGGATGAACTGAAGGGCTTTTTTCAACAATATGGAAA AATCAAGGAATGTAAAATTATCAAAGACAATCAAAGCATCAGTCGAGGGT AAGATTAAGAGCTGTTCGGTTTTTCTAGTCTTTACAACTCTGCCAAAGCT CCCGCCATGATGTAGCCTAGGTTTTTAGTACAGGTGTTATCTTACTTAAA ATATTTGTGCTTTTTAGACCTTTTCTTTTCAACTTCGAACTGGTAATCGC AAGTAAACTTTCTTAGGGATTGAAATTCGTCTCATCTCAAATGTACTCGA ACAAGTGAAGTTCGAGTAAAAAAATTACTCTAACTCTTCACAATTTTTCA AAAGCATAAGTTCGAGCAAGTTTGATATGAAAATTGTAAACTATAAATTA AGCAAATTTGATTTCTTTTTGCTCTTAAATAGAAGGAAACTTGTTCAAAT TTTCCCAGTAAGGCTCGTAAAATCCATAGAATCTTATGTTCAACGGAACT CATCAATCTCTAATCAAACTCCTCACAAATTTTTGAAAGTTTCCAAAAGT TCATAGAGGAATTACTCGAACTTTACTTGTTCGAGTAATGGGGTCTAGAC TTATAAAGGTACTTATTATTGTCAGATTTTTCAGTTTTTTCCGAACGAGA TACAACGCAATTTAAAATTAATTTTTTAACTAGATTCGCATTTGTTACGT TTGAGAGCAAACATGACGCAATTCAAGCTCAACAAAAGGTTTGAAATATT TGAAATGTATTTTAGTCACTTTTCTACTAGAAGAAACATAGGACCAAATT TTTGGAATTTTTTGTTTAAACATTGAGCCGAACGTGAACACCCGGGGGGG GGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNGGGGGGGGGGGACAGTGGGTTTACCAACTGACG GTATGAGCGGCGAAAAATTGGCTTTTAGAATCGCACCCTTGTAGTGCAGA AAAGAATAGGTGAAATTCATCCCCATACAGTGCATTTTTCAAATTTTAAA CTCTTTTAGAGCAAAAAAAATCAACTTTTTCGAGCAAAAATTTACAACTT TTTCCAGACTTGCTGAAATTTCCACCCTTACAGTGCATTTATCAAAAGTC CACCCTTACAGTGCATTTCTGATATTTTGAAAAGCATACCCTTAAACGCC GCATATACCCGTCGGTCAATTTGCCTGACTGCCCCCCCCCCCTCTCCGGG CGTGAACAATACGGACCATTGTAACCTTGCCAACAAATACGGCACTTTTA GCAGGCTAGATTTTTAGTGTTTGATTCACATTTACCGGACCTGCCGGAAC ATATGCCGGGAAATGCGGTAATCAATACGGGCATTATATTTGAGACATCA CCGATGGGATTCCCCTACAACTTTCACTTTCGTTTTCAGGGCACAGTATT TTTCAATCAGAAAAAGTTGAACTTGGGTCCTGCTATCAGGCAAAAGGTTT GTCAGTTTACTCTTTTCTTTAAATATTATTCAATTTCATTTGAAACTGCT TTTCTATCTAATGATCTTGAGGGCATAGTCCAATCTTTAATGTTGAAGGG TTTGTTAGAGTATATCCTTTTCTGTTTTCAAAGCAAGGGGCCCTAATATT AGGTATTTGCACTGAAAGATTTACTTTAACGGCTAAGTTGTATTTGATTT GTTCCTACTTCCAACATTTTTTACTCTTATTTATCTCCATCCAGGGGGAA ACTAGGGCTGCCAGTTAACAATAGGCAACCCAACTTTGAACCCACTCTTA CCCATATCAGGATTAGAGAAAATACCACTTTGTGAATATTAATACCATTG CTTGTACTAATTTGACCACATTTCTATCTCTCAACAGGCAAAAAGTTGAA ACTTACTATTTTTCTGTCCCTTATTGAGACTGGGATTTAATTTTCTCACT CTTCTAACCCTTACAGAGACACCCAGGTTCCACTTCATTTGCCTAGCTAT CCCCTGGGTCTGGGTAGAACAATAGTAAAGGGTCTTTAAATGTAATTATT GAAATTTAGGGAGTCGTGTTCAATGGAACCAAGGAAGCAGGAAATGGTAT GAAGATGATTTCAATTTTCACAAATTATGATTGTCAAAACTCGAATCTGT CTAATGTTTGCTTTAGAGAGAGAACTTGATCAAGGTTATTATTGGATCAG CAGAACAAATAATTGCCTCTCCTAACACATATATATACATGAAGCAATTT TTTGTTACCTTTTTCTATATTTCTATGTGATTTTAATTAATTCAAATGAG TCTACTCATTGTTCATTTTAGATCCTGTGCTCTCAACTGGAGTTTATATC CATCCCAGCGGATATTCTTATACAGTTGCTCCAAATGGTGTGTGGTATTT TCACAAACCAGATGGCTCGCCACCTTCGACAGCCCCTGGCGCACCACCTA TGGCTTATACACCAACAACAATGCAAAAAATAGCCTCGCAAAGTTCTCCC ACCTCTACCAAAGCATCTAGCAGTGAGAAGATGCAAGAAAGTGGTGTAGA TGAAAACAGAGCAAATACTACTGTTACTCATTCCAATATGCCAATTTATC AAAACCCTGGAGTCATCCAAGAACCAGTGCAAATACCTCAGACTACAATT CAACCAGATATCCACTACCAGGTTAATGATTTTCTAATCATCTTTGATTT CTTTGAAAAGATTGGCTCATGTCATCAGAAAGCTTTATTGTGTATTGTTG CCTATTTTTCTGGCAATTTTAATTTTTTTTTTTCAGCAAAGCTAAATATG AAATAACTATCCTATATTTACAGCCAACAAGCTATGTTCAACATACTCAT TCAACTTTTGGAGGATCAAATATCCATGTTGCTTTTCAAAACATGTCCAT AACTACTCATCCACAAACAACGCCCATTCCAGTTGGCCCAGCCGCTCAGA TGACTGTTCCACTCACTATTCCTCCCTCCTCGGAGCATATACCTGCTGAT ATGAATGGTGGTCATAATCCTGGTTTTAATTATGTTAACGAATCATGCAT GCCATATTACCCAAATGGAAAATATTGTAGTCAGGGTTCTCAGACAGGTG CTATTCCAGCCGATGTAAGTTTTCTTTCAATAAATTCTTCATTTGCTTAG GTTAACCAAACATAAGGATAAGACATTTTTGTGGATTTTTCAAGAGATCT CTATTTCTATAAATTGATCCAAAGGGTACTTACATTTTCCCGCATATAAA CTAACAATACCACAGTTTGAACTGATTAAGATATCTCACTTTTTGAATAA CTTAACTTAACAAGGCATAACATAATTCATAATTCAAATTTGGTTTGCTC CATAAGTATTTAATTTATTCTTTTTCCCAGCCATCCAGACCAGTTCCATA CCCTATGATACCCAGAACAGACTACATCCCTGTTGTTAATTCTTCAATGT ACACCATTTATGGAGATGCTTTTTCCCAGCAGCAACAGCCAGCTTACTTC TTACCAAACAGCTATGTGGATCAACCATACTGTTCCTCCCAAGTTCCAAT GGTAAACTGCTCTAAGAGAGGGTATTATCCACCACAAATCCCTAATGGAA AACCACCTGTAAAGAAAGAGACATCAAATGTTATGAAAAATAATTATAAC CAAATGCACCTTCAATCGCAAGTCGTTTAGAAAGAATTATCATCCATTTA CTTGTTTGGAATGAAAAACCGAAAAATTTTTAAATGTTTTTGATCATTTT TTTAACCGAATATTAGAATTGTATTTTGTAAATACATTTAGTCTATGTTT TGTTATAAAACTTCAATCCATTTTTTCAGATATAACAAATGCTTATTATC AGTTTTGTTTGATATAATGCAGATGTTATTTTTAATTGTTTCTAGATTTA TGTTGTATTGTCCTTAATTATTTGATACAATGAATCTTGTGCGTGAGAAT ATTTTCTGTGTTTGTGTTTATTTCATTTTTATTTAATATGTTGGTTAAAT TATTTAAAATTTTATGTACAAAGGGGCTTCAATCTCTACAAAATTAGTTT TTCTTGTCATCTTGTGGTGGAAGACTCCAGATAATAAGATTTTTAAAACT TTATTTTATCTACCTCACTATGCTTAGCTTGTTTAAAAGCTAAAATTTTT ATTTTATCAAAAATAAAAGCTAAAATTTTTATTTTATCAAAAAATAAATC AAATATAATTCAGAAATTTTTATTGTGCGAATATCACGGTCGTATTATGT TTTGACCTAATAAATGTTTTTGTCAATATTTGGAATGTAATTTTTCAAAT TTATGTTGTATCGTTATATTTGGGGCCAATCTCCAAAATACTCTTTAAAA TAGCTAAAATCCTTACAAATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005022TCONS_00005022Clytia hemisphaericatranscript
TCONS_00005021TCONS_00005021Clytia hemisphaericatranscript
TCONS_00005020TCONS_00005020Clytia hemisphaericatranscript
TCONS_00005019TCONS_00005019Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
boule-like 3TCONS_00005021-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000050supercontigsc0000050:21887..27707 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
42.91 36.74 22.1 17.39 16.39 13.91 2.72 3.29 2.63 3.79 3.27 2.16 1.46 1.64 4.49 4.32 1.68 1.98 0.94 0.56 1.96 1.8 115.05 118.86 12.3 9.7 9.5 12.32 114.02 114.26