boule-like 3 (polypeptide) - C. hemisphaerica

Overview
Nameboule-like 3
Unique NameTCONS_00005021-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length416

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005021-protein ID=TCONS_00005021-protein|Name=boule-like 3|organism=Clytia hemisphaerica|type=polypeptide|length=416bp
MADVVKYGIQIPNRVFVGGVAFDTKEDELKGFFQQYGKIKECKIIKDNQS
ISRGFAFVTFESKHDAIQAQQKGTVFFNQKKLNLGPAIRQKGVVFNGTKE
AGNDPVLSTGVYIHPSGYSYTVAPNGVWYFHKPDGSPPSTAPGAPPMAYT
PTTMQKIASQSSPTSTKASSSEKMQESGVDENRANTTVTHSNMPIYQNPG
VIQEPVQIPQTTIQPDIHYQPTSYVQHTHSTFGGSNIHVAFQNMSITTHP
QTTPIPVGPAAQMTVPLTIPPSSEHIPADMNGGHNPGFNYVNESCMPYYP
NGKYCSQGSQTGAIPADPSRPVPYPMIPRTDYIPVVNSSMYTIYGDAFSQ
QQQPAYFLPNSYVDQPYCSSQVPMVNCSKRGYYPPQIPNGKPPVKKETSN
VMKNNYNQMHLQSQVV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002847XLOC_002847Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005021TCONS_00005021Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 14..85
e-value: 1.9E-21
score: 87.2
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 15..76
e-value: 1.1E-17
score: 63.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 13..89
score: 17.097
IPR000504RNA recognition motif domainSUPERFAMILY54928RNA-binding domain, RBDcoord: 13..99
NoneNo IPR availableGENE3D3.30.70.330coord: 10..97
e-value: 4.5E-20
score: 71.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..184

Blast
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BLAST of boule-like 3 vs. Swiss-Prot (Human)
Match: BOLL (Protein boule-like OS=Homo sapiens GN=BOLL PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 3.340e-29
Identity = 58/130 (44.62%), Postives = 79/130 (60.77%), Query Frame = 0 
Query:    6 KYGIQIPNRVFVGGVAFDTKEDELKGFFQQYGKIKECKIIKDNQSISRGFAFVTFESKHDAIQAQQKGTVF-FNQKKLNLGPAIRQKGVVFNGTKEAGNDPVLSTGVYIHPSGYSYTVAPNGVWYFHKPD 134
            +YG  IPNR+FVGG+ F T E +L+ FF QYG +KE KI+ D   +S+G+ FVTFE++ DA +  Q+     +  KKLN+GPAIR++ V   G   +   P   T      +GY YT   NGV YFH P+
Sbjct:   26 RYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQV---GIPRSSIMPAAGTMYLTTSTGYPYTYH-NGVAYFHTPE 151
The following BLAST results are available for this feature:
BLAST of boule-like 3 vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BOLL3.340e-2944.62Protein boule-like OS=Homo sapiens GN=BOLL PE=1 SV... [more]
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