XLOC_002560 (gene) - C. hemisphaerica

Overview
NameXLOC_002560
Unique NameXLOC_002560
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000045:387347..395175-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002560 ID=XLOC_002560|Name=XLOC_002560|organism=Clytia hemisphaerica|type=gene|length=7829bp|location=Sequence derived from alignment at sc0000045:387347..395175- (Clytia hemisphaerica)
GACGTCAGTTTTTCGAAAGTCAATAATAGTTCAAACAGTGTTCGAAATTT TTCAAAATCCTTCACCAAAACATTTTTCAACAATTCAACATGGGACTACA TTCATCTGGCGTGAAATAAGCGGTAAAAACCATCAAACCAACATTTTTCA TTTTTTTCGATCTTGATTCATCATGGCAGATCACATGGTTGACGCGGCCA CGCGCGCCAAAATGACAACCCGCTGGACGAAAACGGACAAACTAAAGTAT CGCTCCTTGTTCCTTTTCAATAAGGACAATAAATTCCGCATCCTTCTTTA CAACATCTCGACCTCCCAAATATTTGATTTCATCATTCTACTAGCTATTA TTGGAAGCTGCATCCTTTTGACAAAACAGCGACAGCAACAATACAGTTTA ACCGACAAGTTGATTTTGATTGATTTGATATTGAATCTATTGTTTGCATT TGAAGCGCTGATGAAAATTGTGTCACATGGATTTGTTCTTCATCGACACG CCTACTTACGAGATCCATGGAATATCTTTGATTTCATTGTCGTCTTGGCA GGTCAGTGAAAAATGTCGTGTTTTTGTTACTGTCCGTTAAAGATTAGAAT GTTCCATGGCCGACTCATTAGTTTTGACTAGGCTTTACACCACCTTTTCT TAACTCTATACGTCCGTGATTGGAATAAGTGTTTTAAAAGGGTTTTTGTA AGGATATTTTATGGTACTAAATTTGTTCGAGATGAGGAGACATTCCAGTT ATGGAGACTCTAAATTTATCTAAACATCTCAGACATCTCATGTTTGGAAA GGTGTTTCCGAAAAGGATCATAATTTCTCGCATTTTTTTTCCAGGTGGTT TGTGGGACATAGCGGCAGTGACGACGGACGGCAAGTCATTCAGTTTGAAA GCTCTCCGTTTGTTTCGTGTATTTCGACCACTTCGATTGATCGTCAAGTC GAACAATTTGAAAGTAGTGCTTGATACCATCATCAAATCATTCAATGTTT TATTCCATGTACTGATGTTTATTCTCTTACTTATCTTTCTCTATGCTATC ACTGGTATGGAGTTATTTGGAGGTAGGTTTTTCCACATTCACCAGTTTTC ACCAATCATACAAGTATTGAATCCAAGCATCAAGAGGTGCCTTATAATCT TGTTATAAAGCTTCTAGATTTGTTTTCTTATACCCTGACCGTAAACATCA GTTTTCAGAAATAAATCTTATATGGATTTCATGGTCGAAATAAGACCCTG ACTACTTTTCCTCTTGATTATTTAGATACCGTCTACACGGCATGTGTATA CAACGGAACGGGTCAACTGTGCGATCCATTCTTACTATGTGATTTTGGAG ATACGACTTTCTGTCCGGAACGTTTCGGATTGAACGCCTCTTGTATGGAG TATCCCAGTAAAGGAGTTGAATACTCACACTTCGAAAATATCTTTTCATC TATGCTGACTGTACTACAATGCATCACTATGGAAGATTGGGTTCTAGTTG CTTATGATGTAAGTAGCAAGTCCTTGTTTGGTATCTTTATTTTTTTGTAT CAATGCTGTGATTAACTGACAAAAGGAGCTGAATGAGAAAAGTAGCCACA ATATAATCCGCCTTAAAATGACTTAATGAATTATGACTCCAGTGTGTCAA CCAGTTCTAGCCAAGAACAGTTGCAAAAGTAATACCCAGTCTTGAGTTAT TCCGTTGAAAGATGCGATTTAAAAATGTGTGAGCACTTTACACTTTTTTT AATAAGAGCTTTGGATAACTTTGTTCTTGTCTTTTCGTCATTTTCAGTCT TAATATTTATTTATTTATTGGCTTTAGAGAAGCTCAAAATCAGCATTTCC TCGGCTATTTCGGAGATTTGAGGCCCGGATTGTTCTGAATTAGTTCTTAG GTTTGCTTCGTGTTCTTATATAATTGTTCTTAAAACGTATTTACCTTCGA CCCATCTCTTTAGGTTGCATTCTACAATTCGCATTACGCCACTTGGATTT ATTTTATTTCACTCATTTGGATTGGTGGATATTTTGCTATCGATTTGTTG ATGGGTGTCCTTGGTAACCAATATCTAAGAACAAAAGAATGTGCCATTAT TGCTATGGAGAAACGCAAAGAACGCGAAAGAGCAGGTATTTTCTATGTTT TTTATTTTGTGAATTTTTGGATTAGAATATGAAATTATTTGATTCCGATA TCAGCTCAGTGAGAAAAATTTCCTGAAATTTCAAAATTTCTCTTGTCCCT ATCAGAAAGGATACCATAATTTTGTACTAGTACCTTATAATCCCTTTAAT GTTGCTTCTTAGAACGCTTACTGGAAGAACCGAAGAAACCTTTGTGTAAT TTATGGAAAATATTAAAGCCACGTTTGAATCAACTTGGTGAGCGAATCTC GCGCCAAGCAGCAAAACTACAAACGAAATTCAAGCCCATCAATGACCACA TGGCTTTCTTCTATCTCGTCAATCTTGTGGTGTTGGCGGACGTCCTTGGA AGTACGTATTACGGACAGAACAGACCGGATGCTCTACCAAGCCAGTTACC AACAACATATATGGGTCTCAAATTTAGCTTATTTATGTTTTACGTTTTTG AAAACATGATCGAAGGCTTCAGTTTGGGATTACACAAGGTTAAAAAGAGC CCATACTTTATGATGAGTGCCGGTATCACAATCACAGCTGGAATTGAATT ATTTCTTGCAATCACTGGTTGGACTAATGAAGTCTTTGTTGGGATCTCCT TTATAAGAGCTGTGACTTTAGTAGAGCTCTTCAAGCTAACACGCTGGTGG GAACGTTTGAAAATGATTATTAATTCGCTTTTCGAGACGCTCAAAGGTGT TATCTACCTCTTCGTACTACTCTTCATTGTGCTCGCAAATTACGCTTTAC TTGGCAATCAATTTTNTCTCTTTGTACTACTTTTCATCGTGCTCGCAAAT TACGCTTTACTCGGTAATCAATTCTTCGGTGATCCTGAAAAGAACCTACC AACCACATCAGGGACTTTTGATTCCTTTGGAAGTTCCCTTCTGCTGACTT TTGTTATGTTAACAGGTGATAATTGGACAGGTATCATGTTTGACACTGTG GAATTGATGAATGCACCGTGGGAAAAAGTGTTGACAGTTCTTTACTTCAT TTCATTTGTGGTGATCGGAAATTTCATCCTTATGAATGTTTTCCTTGGTA TCATTGTTGATAATCTCACCAATGACTTTGAAGAGAAACAGATCGAACAA GCCAATAAAGAACGACGTAAAAAGCAGAAAATGTTAATCAGTCAAGTCTT CAAAGCCAAAACCCAGTTGATGCAGAAATGGAAAAGTAGTCATGAAAATA ACGGTAGCGAAGAAGAAAATACAGAGAATAAAAACGAGGCTAAGAAAGAC CCAAATCCAACGAATACAAAAAATAACAAGTCATCAAGATTGTCTGAAGC TTTGAAATTGGTTCGCAAACCGGTCGATCCGAAAGTAAAAGATGTTGCAT TTTTCGTAGATAATACATTAAAAAACACTTTGGTACATTTCGATGATGGA ACAACGAGTTCGTTCAAGTCTGACGGATCATTCATGTCCACAAAATCGAC CATTCAGGTCACAGCGAAAACCTCCAAGCTTTCCAATACGCTTGGAGATG GGTATGGGCTGGGCGAAGATCGGGATTATCGGAATTCAAGCAGCGATGAC GGGGATAGTGAAGAGGAGGACGAAAATCCTCACACTCAAATCGAAGACAT CCATGACATGATTCGAATGAGTTCGCGAAGACGTGCATATAGCTTACGAT TGAACCCTGAAATCAATTGCCCAATACCTCACCATAAAGCTTTATTCTTA TTCAAACACACTAACGAGTTCAGAAGACACATCTTCTGGCTTGTAACCAG CTCCAAATTCACGTACGCTGTTTGTGCAGCTATTGTGATTAGTTGTGGAC TGATGGCTCTCGATGACCCCTTGAATAGAGACCCAGAATTGACATTGTGG TTGGATAGAATTGATTACGTTTTCTCAGGTAGGCTTCTATATTTACTTCA CTAGCCAGCGACAGAACTGGGTCGGCTCGAAATTTATAACGGAGAGTGAA CGTGTAGGATAAGTTTAAAGGATATCCTACCTTATAAATCATGAATCCCT TGCACCGTTTTACCATTTTTACCATTTTTAGCGAGGGAATTTGCTTCCGA AGAACGGTCAGTATTTTTACTGAAAGTATATTTGTTTTGTTCTCGGTTGT CCCACAAAATTTGCTGCGATATGAACGAAAGATACAGTAAGTAGCCTCAT CCGTCTTAGCAAGTTTACTACCGATACTTAAACCGTTAAAAAGTAGTTTG GTGTCTCTTGAAGAGAGGCTGCGGTAACTGGTTGTATATATATATAATAT TTCATACTCCAAGTTACTGAGAGTATCAAATTATCAGCTTGATGGCAAAT TTTATCTTCCCTCTTTTTCAGCTGTTTTCTTAATCGAAGTCATTCTCAAG AGTATAGCATATGGTTTTGTGATGGGTCATAAAAATTGTTACCTGCGAAG TTATATGAACATTATCGATTTCGTTGCCGTGTTTTTCTCGGTGTTCAATA TTTTTATTATGCTGGTCGGGGAGTCGGAACACTTACAATTCAAGACTATC CGTATCATTCGTGTTGTACGCATGTTGAAGATCTCCACCGATTTGAAACG TGTTATTAACTGTTTGTTGAACAGCTTACAACGGATCACGTATTTCCTGG TGCTTTACGTTCTCATCCTCTTCATCTACGCCGTCATCGGTAAGCATCTA TCAATATCATGCAATGTTTAAAAAAATATAGGGCAAACCGGAAAATTCAC CATGACTTCTTGGAAAAATTCACTGTATCTGTTGATAAATCTTAGCCTTT CACTGTGAATTGTCGAAAGATTTACAGTGAATTCTCTGATCCACTTTTCA GGCATCCTGACAACGCCATGTACAACTTTTATTCCACAAAGCTAACGAGT TTTATTAAATCTTTATTTCATCCATAGGAGTACATCTTTACCATCACGCC TTACATGTTCCATCGCCCATCAATTTGGTCAACGCCTCCAGTAATACGCC CTACTTGATGAAAGACAGCCACGGGTCCATTAGTTCTTCACCTGAGATGT CTTGGGAGGGTGTCAAACTCTCCTTCAATAATTTTGGTCACGGAATGATG ACACTGTTTGTTGCCAGTACGTTAGATGATTGGTTTTTGGTGCTGACACG GCTGACGACGGCTGGACATAGCGAAGTAACCGGCATCGTTTTCCTACTCT CTTTTCTTATTCTAATGAGCTTCATCTTGATGAATGTGTTCATCGGTTTT GTGGTGGTTCTCTTTCACAAAGAGAAAGAAAAAGACGAACAATACAATGT CTTAAACACGTCTGGTCAAGAATGTTTGGTGACCGCGCTGTCCGCTAATC CAACGCAATTGTACGATCAACCGCATGGTAGATTTAAAATAATTTTCTGG AGGCTTGCATCACATCCATGGTTCCAAAAGCTAAGCATGATTATGATTTT AATGAATACAGGCTTCATGATGACCAAACATACACGGCAAGATGAAGTAT TCTTTCAAATACAGAGGCTAAGTAACATCGTTTTCACTAGCCTGTTCACC ATTGAAATTGCTATCAAATTAACAGCCTTCTCTATGAAAGCCTTGTTAAG AGATCGCTGGTTGTTGTTCGATGCTATCGTTATTCTTGGGAGCTGGTTTG ATATCGTACTGGAGGAGCTACAAATACCATTCTTAAAGTTATCCATATTC CGACTTTTCCGTGTGGCTCGATTAGCACAAGTTTTGGGTAAAGGAGGCAA TTTGAGACAGTTATTTGCGACATTCTTGAAATCAATGAAATGTGTACCAT CCATTGCGTGCTTGATGGGTTTAATCCTGTATTTCTACGCCATTCTGGGA ATGAACGTGAGTATTCCTTTGCCGTAATTCCTATTGACACGAATTTCCCA GTGCGATTTTAANTTTTCACTAGCCTGTTCACCATTGAAATTGCTATCAA ATTAACAGCCTTCTCTATGAAAGCCTTGTTAAGAGATCGCTGGTTGTTGT TCGATGCTATCGTTATTCTTGGGAGCTGGTTTGATATCGTACTGGAGGAG CTACAAATACCATTCTTAAAGTTATCCATATTCCGACTTTTCCGTGTGGC TCGATTAGCACAAGTTTTGGGTAAAGGAGGCAATTTGAGACAGTTATTTG CGACATTCTTGAAATCAATGAAATGTGTACCATCCATTGCGTGCTTGATG GGTTTAATCCTGTATTTCTACGCCATTCTGGGAATGAACGTGAGTATTCC TTTGCCGTAATTCCTATTGAGACGAATTTCCCAGTGCGATTTTAATTTAT ATAATCCACAAAGACTTGAACGTTATAGTCCGTTCACCATTTACTCTGTA CTAGAGAGTATCTTAAACTTTAGCGTAGTGTATTGTCTCTACGGAAATGA ATTTTGAAATTTCCATAGATATCACAGGTATTATTAAAGACAATCCACTA TCATACCCAGCTGGCACACAACGTTGTTTCAACGTTCATCTAACGTTCAC AACGTCCATATAACGTTAGATGAACGTTAAAAAAATGTTGTGTGCCAGCT GGGTAAGGTCACAAAACTTACAGTGTTTCTGATAGTTGAAAAGGTTTGCG TCTGGTAGTTGTCAACGATTATTCAAAATGATCAGACTTTTACAGAAAAT TATGTGAGAATTAAAATTTGCCTTTCTTTTTTCAGTTATTCGGGCGTTTA AAAATCGACGATACAACTGCTATCAATAGCAACGCAAATTTCCAGAGTTT TACCGCCGCTATACTCGTGTTAATCCGGGTTACAACTCTCGACCAATGGC AAGGCATTATGTTAACATGCGCAGACACACATTTGATGAACTGCGCAAAT GGAAGCAATGAGAATTGTGGGACAACCATTAGTTATTTTTACTTCGGTTC CTTTGTTTTTATCTGTTCCTACATCATGACTAACCTCTTCTTAGCCTTCA TAATGGATAATTTTGTATACTTAACACATGACTGGTCTGAACTTGATTCC CGACATATTCATCTATTCACCGCTATATGGGGCCAGTATGATAAATCAGG GGCCGGATTCATTAAGAAGGAAAAACTTGTATCGCTGTTGAAGAACTTAA ACCCTCCACTTGGGAATGGTAAAATGTGCCCAGACCGTACCATCTATGCT CGCATATTAAAGTTACGCGTTCCAGTGGAAAAAGACGGAACCGTCCGGTT TAACGAGCTTTTGATGACATTGGTATTGGACTTCTTACAGCTTAAAGTTG ATAACGTCATCTTAAGAGAAGATATTCATAAGTTGTTCCCGATCATTAAC GATGACTTGTTGGATCGTGTTTTACCATTAAGTTATGATCCGCGCATCAT CAATGAAACTGAAAAAGAATTTTACCAAGATTGCGCGTCATACGTCATTA CGGGTTATTGCCGTTTATACAAGAGTAGTTTAACAGCTGCATTTAAGATC AAGGATAATGCGAACAGCAGTAAAGAGGTGCAAAATATTTCCAGAGGAAA GTTCGCGTCATTGGTATCGCGTTCAGCGCGTGATGTTCCTTCCATCGAGA TCACAGAACCACGTGGTTCGAAATCATTGACCAATCTTGATTTAGAACGT GGAGACCTCGTGCAGAAAATCAAGGTAGCTGAACGGAGTAGAACTTGGTA AAAGGTCTTTTTATACATTCTTATTATAGCTGTAGTGTTGTTGAAATAAA TATATTTAAATTCAATTGAAATTGGCCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004555TCONS_00004555Clytia hemisphaericatranscript
TCONS_00004554TCONS_00004554Clytia hemisphaericatranscript
TCONS_00004553TCONS_00004553Clytia hemisphaericatranscript
TCONS_00004552TCONS_00004552Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004552-proteinTCONS_00004552-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000045supercontigsc0000045:387347..395175 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.58 0.43 2.72 2.7 0.22 0.3 0.34 0.09 0.17 0.13 0.09 0.05 0.05 0.02 0.06 0.05 0.02 0.07 0.08 0.25 0.13 0.04 0.09 0.12 0.42 0.92 0.1 0.08 0.08 0.04