Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00004552-protein ID=TCONS_00004552-protein|Name=TCONS_00004552-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1646bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00004552-protein vs. Swiss-Prot (Human)
Match: CAC1C (Voltage-dependent L-type calcium channel subunit alpha-1C OS=Homo sapiens GN=CACNA1C PE=1 SV=4) HSP 1 Score: 404.445 bits (1038), Expect = 5.196e-115 Identity = 269/878 (30.64%), Postives = 440/878 (50.11%), Query Frame = 0 Query: 788 GEDRDYRNSSSDD-GDSEEEDENPHTQIEDIHDM------IRMSSRRRAYSLRLNPEINCPIPHHKALFLFKHTNEFRRHIFWLVTSSKFTYAVCAAIVISCGLMALDDPLNRDP-------------------ELTLW-LDRIDYVFSAVFLIEVILKSIAYGFVMGHKNCYLRSYMNIIDFVAVFFSVFNIFIMLVGESEHLQFKTIRIIRVVRMLKISTDLKRVINCLLNSLQRITYFLVLYVLILFIYAVIGVHLYHHALHVPSPIN-LVNASSNTPYLM-KDSHGSISSSPEMSWEGVKLSFNNFGHGMMTLFVASTLDDWFLVLTRLTTAGHSEVTGIVF---------LLSFLILMSFILMNVFIGFVVVLFHKEKEKDEQYNVLNTSGQECLVTALSANPTQLYDQPHGRFKIIFWRLASHPWFQKLSMIMILMNTGFMMTKHTRQDEVFFQIQRLSNIVFTSLFTIEIAIKLTAFSMKALLRDRWLLFDAIVILGSWFDIVLEELQIPF-------------------------------------------LKLSIFRLFRVARLAQVLGKGGNLRQLFATFLKSMKCVPSIACLMGLILYFYAILGMNLFGRLKIDDTTAINSNANFQSFTAAILVLIRVTTLDQWQGIMLTC-------ADTHLMNCANGSNENCGTTISYFYFGSFVFICSYIMTNLFLAFIMDNFVYLTHDWSELDSRHIHLFTAIWGQYDKSGAGFIKKEKLVSLLKNLNPPLGNGKMCPDRTIYARILKLRVPVEKDGTVRFNELLMTLVLDFLQLKVD------NVILREDIHKLFPIINDDLLDRVLPLSYDPRIINETEKEFYQDCASYVITGYCRLYK 1571 GE + DD +E ED++P+ E + + + R R S E P+P A F+F N FR +V + FT + I++S +A +DP+ E+ L L DYVF+++F +E+ILK AYG + HK + R+Y NI+D + V S+ + I + + +R++R +R + + LK V+ C+ +++ I +++ L+ F++A IGV L+ L+ S + A Y+ KD SWE K F+N MM LF ST + W +L R + H+E G ++ + ++I+++F +MN+F+GFV+V F ++ E++ + L+ + ++C+ AL A P + Y P + + W + + +F+ L ++IL+NT + +H Q +F + N++FT LFT+E+ +KL AF K D W +FD ++++GS D++L E F + ++ FRLFRV RL ++L +G +R L TF+KS + +P +A L+ ++ + YA++GM +FG++ ++DTT IN N NFQ+F A+L+L R T + WQ IML C ++ N G CG++ + FYF SF +C++++ NLF+A IMDNF YLT DWS L H+ F IW +YD G IK +V+LL+ + PPLG GK+CP R R++ + +P+ DGTV FN L LV L++K + N LR I K++ + LLD+V+P + D + T +FY A+++I Y R +K Sbjct: 813 GESPPATKINMDDLQPNENEDKSPYPNPETTGEEDEEEPEMPVGPRPRPLSELHLKEKAVPMPEASAFFIFSSNNRFRLQCHRIVNDTIFTNLILFFILLSSISLAAEDPVQHTSFRNHILFYFDIVFTTIFTIEIALKILGNADYVFTSIFTLEIILKMTAYGAFL-HKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKLYTCSDSSKQTEAECKGNYITYKDGEVDHPIIQPRSWENSKFDFDNVLAAMMALFTVSTFEGWPELLYR-SIDSHTEDKGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKARPLRRY-IPKNQHQYKVWYVVNSTYFEYLMFVLILLNTICLAMQHYGQSCLFKIAMNILNMLFTGLFTVEMILKLIAFKPKGYFSDPWNVFDFLIVIGSIIDVILSETNHYFCDAWNTFDALIVVGSIVDIAITEVNPAEHTQCSPSMNAEENSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALNDTTEINRNNNFQTFPQAVLLLFRCATGEAWQDIMLACMPGKKCAPESEPSNSTEGETP-CGSSFAVFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIKTEGNLEQANEELRAIIKKIWKRTSMKLLDQVVPPAGDDEV---TVGKFY---ATFLIQEYFRKFK 1680 HSP 2 Score: 240.736 bits (613), Expect = 1.016e-63 Identity = 218/773 (28.20%), Postives = 349/773 (45.15%), Query Frame = 0 Query: 12 AKMTTRWTKTDKLKYRSLFLFNKDNKFRILLYNISTSQIFDFIILLAIIGSCILLTK----QRQQQYSLTDKLILIDLILNLLFAFEALMKIVSHGFVLHRHAYLRDPWNIFDFIVVLAGGLWDI----------AAVTTDGKSFSLKALRLFRVFRPLRLIVKSNNLKVVLDTIIKSFNVLFHVLMFILLLIFLYAITGMELFGDTVYTACVYNGTGQLCDPFLLCDFGDTTFCPERFGLNASCM---------EYPSKGVEYSHFENIFSSMLTVLQCITMEDWVLVAYDVAFYNSHYATWIYFISLIWIGGYFAIDLLMGVLGNQYLRTKECAIIA--MEKRKERERAERLL------------------------EEPKK---PLCNLWKILKPRL-------NQLGERISRQAAK-------------LQTKFKPINDHMAFFYLVNLVVLADVL--GSTYYGQNRPDALPSQLPTTYMGLKFSLFMFYVFENMIEGFSLGLHKVKKSPYFMMSAGITITAGIELFLAITGWTNEVFVGISFIRAVTLVELFKLTRWWERLKMIINSLFETLKGVIYLFVLLFIVLANYALLGNQFXLFVLLFIVLANYALLGNQFFGDPEKNLPTTSGTFDSFGSSLLLTFVMLTGDNWTGIMFDTVELMNAP-WEKVLTVLYFISFVVIGNFILMNVFLGIIVDNLTNDFEEKQIEQANKERRKKQKMLISQVFKAKTQLMQKWKSSHENNGSEEENTENKNEAKKDPNPTNTKNN 709 K + + T R+L N R +I + F+ IILL I +C+ L + L ++ + ++F EA +K++++G + H +AYLR+ WN+ DFI+V+ G I A+ G F +KALR FRV RPLRL+ +L+VVL++IIK+ L H+ + +L +I +YAI G+ELF ++ C YN G P D + C G C + P G+ ++F+N +MLTV QCITME W V Y V WIYF++LI IG +F ++L++GVL ++ + +E A +K +E+++ E L E+P+ P + + G R++ + +K + K + F++LV +V + L S +Y Q P+ L +L + E +++ +SLGL S + + +E L T + + GIS +R V L+ +FK+TR+W L ++ SL +++ + L +LLF+ + ++LLG Q L G +F D + T TFD+F SLL F +LTG++W +M+D + P + +L +YFI + GN+IL+NVFL I VDNL D E Q +E K++K L K Q + + + E S+EE E K+ +P TK N Sbjct: 87 GKPKKQGSTTATRPPRALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKADGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTC-YNQEGIADVPAE----DDPSPCALETGHGRQCQNGTVCKPGWDGPKHGI--TNFDNFAFAMLTVFQCITMEGWTDVLYWVNDAVGRDWPWIYFVTLIIIGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEDEGMDEEKPRNMSMPTSETESVNTENVAGGDIEGENCGARLAHRISKSKFSRYWRRWNRFCRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHYNQ------PNWLTEVQDTANKALLALFTAEMLLKMYSLGLQAYFVSLFNRFDCFVVCGGILETILVETKIMSPL--GISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQ---------------LFGGKFNFD---EMQTRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIILFICGNYILLNVFLAIAVDNLA-DAESLTSAQKEEEEEKERKKLARTASPEKKQELVEKPAVGE---SKEEKIELKSITADGESPPATKIN 822 HSP 3 Score: 110.923 bits (276), Expect = 3.988e-24 Identity = 85/315 (26.98%), Postives = 152/315 (48.25%), Query Frame = 0 Query: 846 KALFLFKHTNEFRRHIFWLVTSSKFTYAVCAAIVISCGLMALDDPLNRDPE--LTLWLDRIDYVFSAVFLIEVILKSIAYGFVMGHKNCYLRSYMNIIDFVAVFFSVFNIFI----------MLVGESEHLQFKTIRIIRVVRMLKIST---DLKRVINCLLNSLQRITYFLVLYVLILFIYAVIGVHLY----HHALHVPSPINLVNASSN-TPYLMKDSHGSISSSPEM---SWEGVK---LSFNNFGHGMMTLFVASTLDDWFLVLTRLTTAGHSEVTGIVFLLSFLILMSFILMNVFIGFVVVLFHKEKEK 1134 +AL N RR +V F + I +C +A+ P D L+R++Y+F +F +E LK IAYG + H N YLR+ N++DF+ V +F+ + L G+ K +R RV+R L++ + L+ V+N ++ ++ + + +L + ++ IYA+IG+ L+ H + I V A + +P ++ HG + + W+G K +F+NF M+T+F T++ W VL + A + I F ++ +I+ SF ++N+ +G + F KE+EK Sbjct: 102 RALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERVEYLFLIIFTVEAFLKVIAYGLLF-HPNAYLRNGWNLLDFIIVVVGLFSAILEQATKADGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTCYNQEGIADVPAEDDPSPCALETGHGRQCQNGTVCKPGWDGPKHGITNFDNFAFAMLTVFQCITMEGWTDVLYWVNDAVGRDWPWIYF-VTLIIIGSFFVLNLVLGVLSGEFSKEREK 414 The following BLAST results are available for this feature:
BLAST of TCONS_00004552-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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