XLOC_002547 (gene) - C. hemisphaerica

Overview
NameXLOC_002547
Unique NameXLOC_002547
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000045:745086..754020+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002547 ID=XLOC_002547|Name=XLOC_002547|organism=Clytia hemisphaerica|type=gene|length=8935bp|location=Sequence derived from alignment at sc0000045:745086..754020+ (Clytia hemisphaerica)
TTCCTAATCACGACGATGTCAGGTGCCAGGTAGTCCAAACGAAACTTCGG ATGATTGGTGACGTTTTAGAGCTATCAAAGTGATCTGTAAGGTTGATTTT GTTGGGGAGGGTCTAActtaattttgataatattttacaTTTTGCTTTGT GTATGGTTTTGGACGGACAATAATAGTCTGATAGATAGTTGTTAGTCTGT TAGGGAGAATGtaacggtcttttgaataactagtTACTCCAGTATCCCTC AACCAGTACAAACAAGATGAGTTACTGTCAACCTTGGGATGATTGCTCAA ATCTTGCCTTGGCCTGCCTCCTTGCACCTTGGGTAGCTTAAAATTATTAA CCTTGGGATGGTTAATTTCTGGCAGTCTAGCAAAAAGTTAattcttcttt caaaataaaactatAATAGACCAGTGTCCGagattcagaaaaggccttaa aaatggttttcgtagggcaccccttagatcagggcaaatttttggatatt atgctccttatattatatatatataaggtgtagaatacacctttcccgta tttcgaaaaaaatatgcgCTCACATATTTTTTGCTCTCCATCGTTTCTTG GacgggaggtaaacaaacctaTTTTTGCTGGCAATTGCTTAGGAAAAGgt ggttttttggacttttctcacagttagtcacactaggaaatttagctttc agaaaaaacaacatctagaccagtcaggcacatcctggcaaatgaacggg ctGAGCATTTGCAttgggtattcgtcacccagtgtaaatgagatgacgtc tcaggctaaaagcgtgaaaatgaataaaaatgaacttcaaactgaaaaag ggaaaaaaggaagaaaactgggaactttattttttcgttaaaagtttctt caatcttcgaagacaaaattgacccatggaaaaaaaatttcatcgatgca gttctttgaaatgaagcaaaatatttccaacccggttcaattaaactggg tattcggcgctattacgtcactttcgttttcgaccccattcatttgccaa tggtcgcaagtgaaaaataccccgttcatttgccaggatatGCCTGACTG NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNTTTCTTGGTCAATTTGAAggtgctg attcggaatttgaatgttaccaagcttgaaaacccgcagtttttacgtaa tttgcgattttttgcgtttttagggaaaattcatgattttggagggggtc ttcaaaatcaaaaaagacctataccacgtgatagagctcttcaaactgag caaaaaaatgtattatatcaaagtctcaacttttcttaATCAAANNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNacttttcttaatcaaaagtta tgggcgtttttgtggtaaaaaagtgctataattttgcataaattatgcag attgtggggaaattccctgttttcaatcaattttttaccttaaaatcgtc tataacttttgatctaaaaaagttgagactttgatataatacattttttg ctcagtttgaagagctctatcacgtggtataggtcttttttgattttcaa gaccccccaaaaatgacaaattttcagggcttacaattttgcctaaaaac gcaaaaaatcgcaaattacgcaaaaactgcgggttttcaagcttggtaac attcaaattccgaatcagcaccctcaaaNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNccctcaaattgaccaagaaagatat caaaagtttattcaccgacattttgaattttttatttatttttgaaacaa taacaatccactggccacggcctaatcagtcatctacaggatgtatttca acaacaaggatgagagctacctgaatcaagttcaagatcccaagacaatc aattaaaacttgaaaacttaaaatgatacaaaatgcgattgcgaacgtgc agcagcgccaaatatcaaccaaccaaattttgccattcaattcccaagac agCACTtagatttttaaggccttgtttatacgttacagtaaagtaaaaat aattccgcacatgtaaatgggtcattgtttgaggtccgacAAAATatccg ggaaacagcctatccggtggtgcgcagatctaggtgggttccgcctcccc cgtagatctttttcttgggaagttgatcttcaaattagtttttaaggttg gcttggctcaaatttttgCATCTATGGCTCAAATtttaggcaatttctca aagtttttgaaaatgttaatttcattaaaaagcgccgggttattttttca tgaatccctttagaagttttgcagcgcatttttttgcttgagagtcaagt aaaggATATaacgctttcgcagcattaatttttgagaagcattttggcgg gacgctagtgtgactaactgtctcaACTTACATCGTacagaattttttca aattttggtatGTTTCTACTATCCTTGATACAATaccagacagtgtcaat cgaacaacttcgaacaaaattgcaatcgaaccaatcgaaggTAATCAAAc gtgatcgaataattgcgatttgattgtcgaacgtaatcgaatctcaatcg aacggccgattcatgggtaatattcgattgtgttcgacgCGTTCAAGTaa ggttcgattggttcgattggttcgattgataggtgactatgttcgattgg ttcgattgattgtcaattacattggattttaaaatcttcaatttcgttcg attacgattatgttcgatgagttagATTGGGATCAAATTAAATTGGAtga ctctgttagagctttttagcgtggctGGGCGGCCGAGTGCTTGAGGTGcc ataccaaagcgaataaaatctaatacaattgaatcaatcaaacgtaatcg aatgcGATCGAACGTAATGGAATacaatcaaacataatcgaagCAATTGA ACAGCAAATGCAATTGAACAGCAAATGCAATTGAACAGCAAATGCAATTG AACAGCAAATGcaattatttgattgtgttcaattgtgttcgattgattcg gtgttcaattcgttcgattgacaccatcTGGACAATACTTCCCtccaaat tctttttcaaacaaacttgGGCATCGAAAGATAGAAGACAAAAACTGCTT TCCCCTAAGCAAACGCAGGTAAAATCGAGTTTGTTTACCTCCCGTGAATT CCCGTGTATTTTTATCACAACCGTGGAGAACAAGTTTTTTTCCGGGAAAt ctgaattacgggaaaggtgtattgacaaaaaaaaattgcccctcgaatct cctgcagttttcgagtgaatcaatttttggagttttttcgaagtctgaaa atcaaatatctgaggctaccaagggattcagcgtgaaaattAGATaagga aaatgggtttttttgtttatttcacacaaaatggggttatttgttaagtt tcgaccacctagtgccgagaaatggcatttttaaggcaaaaaatcaatgt ttttggcgttttctgatgacgtcagcatttttctgggagcattttcagaa aaaatcattcctgCAGCTTGATAGCcatgaattagtagtatccgaaaatg gtatggtttgttaactttcgatcttgacatattccatttttaaggtgagt aaatatgctgaaaaactgctgactcagcaaaaaatatcgataattttcat tatctaaaccaaaatatctcaagatctagacatcgaaagttaacaaacca taccattttcggATACTACTAATGCAGGGCTATCCACAATCGtccactaa atatttgagacaaaggggagttcccggtgtaattttgaacaccacaattg atttagttccttaaactacagttggaaagtagagttttaactctgagttt taacatgagacttaggaccttaggatcttaggatttaagctcaaatttgc tcgaatgaggcagaatgaggcttggaatatagcctagaagccaccaaacc cctctaaaatcgaaatattcaatggaagaaagcggaagtgctaaaatagc aattctcgcccgaactttaaattctgaaaaacgttaaagtacactaaaat ctcaatacaTTTCGAGAGAGATTGcagctgtgggaatgattttttctgaa aatgctcccacaaaaatgctgacgtaatcagaaaacgccaaaaacatcga tttttcaccttaaaaatgccatttctcggcaccaggtggctgaaacttaa caaatgaccccattttctttatctacttttcacgctgaatccgttggtag cttcagatatttgatttccaaacttcgaaaaaaccgttagtaaagggggg acccttgataagttctatcaattaactaaaatttgattcactcgaaaact gcaggagattcgaagggcaaattttttttgtcaattctacaccctctTAG GAGAATACTATCAAAaattgccctgatctaaggggtgccctacgaagtga cacaattcattacctcggccgctggtctataatttgtttacctttattct tgcagcttcccagcattcaagctctcaaacatcataccgtgagattgggt aacttgcatcagtggaggctaacatgcatagccctcaaatgaaagacctg gctggtcattaaaatacaaagttaaatcaaaacaaaaagggtAGAGTAAA GATGCGTagactgatgcaagttacccaatctcacggtatatttGACTATT TTTATCCCCTTCTTTGTATTCTTGAGAAACAATCTttgtatctctaaaac agcGCTCTCTTCTTGGAGCACAGattgtcaatctatatccacttgcacCA TCAGCATCCTTTTATTGaccttgaaaaaatattttgttgtaaATTTGTGT ACACAACTTATATTATGTGATTACgtcattatttttataatttaagTGTC ACTTAATAAGGGGGGATACCTGTTTGAGGGCACAAAAGAAaaggtaattt tgaatttaagggGAGAGTAATTCATGTGAATCCAAATCTCTTTTTACTCT TTGTAATACCAAAAGCTGAAGTACTTTGTAATAAAATATAGATTTAAATG ACTTCGTAAAAAGCCCTGTAAATTGTAGAGAGTTAAAGATTAAGATCCAA AGTTTCAGACttttaaaagtaaacaaaatgTACTGGGTTCTGTCCTAAAT ACTTAAACATGGGAATTAATGAATATCTTACTGTCTTAATCATGATCTGA TTATATTAACATTGAGCAAGTCATAACCCTgctttttgtaatttccctga tacaaacaaagaaaaaactttacttATGgctgaaagaataaaaaaatttt caaccaaccaaattttaaaatgtagtgatcaaatgttttgattggccatg gaaataaaaatagagatcaaatgaaaatcaaaaactcaTTACCCCAAAAA AGGTTTGAACGTCTTCCCTAATTGATTTTCCAGGCATGTCAGACAGCTTC ACCTACATTATTATTACtggttttgaaattgttttgttttggatgGAAAT TTCCTGTCAGGTGctattacaaagtgtgtcagcTTTTTGTATTACAAAGC GTGTTGATTTTTATTACAATTATTAAAGTGCTCTATCTGATTTGCACGCC AGGGCCATGTATGTAAGAAATTCCATGTTCCAATCTAATATTGAAGACaa atcatagtcattataaaaacacttgtctggaaggcttttgtctcttttta ttgttaaaagatggagcttatgtaccaaaatcgatttattttgcaaactt tttgatcatgtgattaaaaatagaccaatcccaagaggagattttggtaa cgtgatcaaaaagtttgcaaatcgcaacttgtgttttgtttgtaacaaaa gaaaattgaacaaaaagctaaaacaatacattgccagactggggtttttt ataatgactaaaGACAAATCACAATCTCGAAAGCAAAAGAATTAAGGGGt actttagaaaagaaaaaggaagatttAAGGGGGGGGTTAAGAAATAAGGG CGCAGTACAAATGGAATTCCAAATTTAGGGGGGAGAAATGGGTAAGGGGT AATTTGCTGTTTAAGGTGGGACTGAAAAACATGGATGAAACCATGCCCAG GCGTAATTCTGTATGCCATTTGGTGTGCCATTTGGGGTGCCATTTTGGTA TGCCATTTTGGGGCGCCAACCTATGTCGTAACCCCAAAATGCCAGGACTC TGCCATGCACTTGTTGAAAtttattgtttattcttgctctATATTTGGCA AACAtggtttttgaaacttttaggTATATACTGTATATCAGGCAAATTGA AACAATTATTCTTGCCTGTGTCAAAGTTGTGCTCACAACACAATTCCAGG GGGTGCAGGGATACTTGGTATATTCATCCCGAGCATCCAAACCCTATACT AAAGAGGGTGATTTTTTGCTGACAAAGAGagactaaaattgctttaaagg TGAGCCTTaaaagagatttaaaaaaattcaattattgAGAAAGAATCTTT CTTTTTGACCTTGGTTGTTTTTGTAATGACCCCTGGATCACAACTGTTGA GTGTCGCCTGAAATATTTCTCAATTAGGTGGCATCTAAAGGCGAATGTCT AGATCTCTatggggggggtcggtactaaaatctcagacatcatgacattt agtgacgtggtggtactgcaaaaaagctcaaaaatagttttagtaccatg tgtactaaaataccaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNaaaataccaaaaagggtggtcccttaaagaaatat ttgaaaaatcttagtattttgttctaaaatcagccaaaatggagcatttt tttaacaattttagtaaaaaatttgatttttttttcaggaattttcgaaa aaatcttcagaaatctttcagaattttccaattttttaaatattttttag aaatatttttatgtacagtttagcacagtttagtaataaaattacattat tttgcagattgatgcgctaaattcgactaggtttgtaacaatgaccccat tttggtaaatttaaacccgtaaaagggcaaaaaatgggtggtatctatgt tNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Ntgctcaaaataattttagtacatgtgtactaaaataacattttcgaaaa ataggtggtggtatgcaagaaattcttgaaaatccttttagtactcatgt atgtctgacattttagtactgacccccccccctggtaaATGACCATTTAA CTATCTTACTAAAGCAACGCGAGTCCATAAAACAAACAAAGCAAGATTAT AATGATTTTTCTCTTAATTCTATTTAGGGGGACACAATATGttcatattc atgatatgcaccactgcaatgtcttctgacatcaTATCacagacccaata gctgattggttgtaagtgacgtaaaatcagtcaatacgtcactttcaatc aatcagctgtttggtccgtggaagacattgcaatggtacaTATCATAAAT TACTACATTAAAGGTTTTCAAAGGAAGTGGAGTGTATTCAATTCTCACTT TTGCATTTTTAGAGACTTGCTGGTGCAACCCTTTTGGTGTTCGCCAATAA ACAAGATTTGCCAGGAGCTTTGAAAGCTGATGAGATTGCAAAAGTATTAG AACTTGATGAAATCAAAACACATCATTGGCAAATTCTTGGTTGCAGTGCT GTGACTGGTGAGAAACTTTTAGATGGagttgattggttgattggAGATAT AGCTTCCCGGATATTTACCATGGATTGAGGAGATTCAAATAACCAAAGGA GGTTAGGCGTGGTTTTGGAGACTGTTTGCTTACATCTCCGACTGAAATTC GCCTTTGAATTAACTTGATtaaatttcgaaggaaaagtAACATTGTTgtt aaataaaaagtgaaaaaaaaatgaaatcattgGATGCGTGTCTTCGTAGA CGTGTATTGGAAAAGCAATAACAGTATAATCTATTGATCACACATAATTA ttttaatgatgaaatttaTTCAATGCAATATTTCCAGTAATAAATCCATA CAGATAGAactatttaaaattttattacatcTAGATAGGGAATATTTATT TTACtaaatttataatttgtaaataatcaaaatctatcaaaaaacaaaac ttgGATAATGTATGGTTctcagagaagaaaaaaattctgctTCATTCTTT CCAGTCCTCTTTGATGATATCAGCAGCTTTTTCAGCGATCATAATTGTAG GTGCATTAGTATTTCCACTGACAATGGTTGGCATGATTGATGCATCGATA ACACGTAATCCTTTGATACCATAAACTTTCAATGTTGAATCTACAACTGC TTGATCATCAGTATGTGGTCCCATCTTGCACGTACCCACTGGGTGGTAAG TTGTTGTAGCTCCTCTCTTAGCAATGCATCCAAGGTAGTCATCAGAATCT GAAAACAGATTTATTGTTATTACTGTAAGATTCAAATACTTATTCTTAAA CTCTTTAATTTGTTGGTTTGGTACATTTAGAAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004527TCONS_00004527Clytia hemisphaericatranscript
TCONS_00004528TCONS_00004528Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000045supercontigsc0000045:745086..754020 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.32 4.85 1.19 0.63 7.02 5 4.45 3.97 2.86 2.17 1.07 0.61 0.65 0.72 0.25 0.5 0.93 1.08 0.31 0.07 0.74 0.63 2.49 2.95 2.15 2.78 0.86 0.44 1.43 0.95