XLOC_002295 (gene) - C. hemisphaerica

Overview
NameXLOC_002295
Unique NameXLOC_002295
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000039:399911..404178-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002295 ID=XLOC_002295|Name=XLOC_002295|organism=Clytia hemisphaerica|type=gene|length=4268bp|location=Sequence derived from alignment at sc0000039:399911..404178- (Clytia hemisphaerica)
TTATTTTGTATATTACCCCCGGAAAATAATCACATTTACGTCAATGATTG
ATCACGTGTTCCGAAATCATAACAAACTTGTAAAGTTCAAAATAGAAAGC
AGCAAAAACAAGAAGCAAGCATGGCGTCCAGGAGAATTTTGGTTCAACTT
CAAAGAAATGGAGGAAAGTTGTTTAAAACTAATCTTTTAAACAATACATG
CAATCAAGGCATAAGGAAGAATACCATCACCCAAAAGTTTGGTAAGACTC
TTTCAAGGAGAGGAGTGACTTTGCCTTTCAAATTAAAAATATATGTGGGT
TTTATCTGAAGCACCTTCCGAATCTTCTTTGAATTTTGCCACTCTGTTTA
AAAAAAGCCAATTTTGCTTCTCTGTTAGTTAGGTTGCAACCCACTGTTGG
CCTTCAACTTTCTTTATGAATGCTACTAAAAATTATGAAATACAAATACT
TCCCATTTAATCATCTTTCTCAAACCTGAAATCTGTAACAATTTTGAGTG
TCACCCTTAATCTACATTCCATCACCTTACATCTAAATTCCCAAAAATTT
TAGATATTGACAAATTTTACCGTCAACTGCTCCAACTTGGGACTTTCTTA
CGCAACATGGGACGGCCATTCCACCACGCCATTTCACCAAACCTCCAAAG
TCATTTTATTTGAGTTCAATGAACCACGTATTAAAAAATACACGATTTCT
CTTTCGCACTGAGTAGGTTTTTAAATCAAAATATGAAAAAAATCCGTAGT
GGAAAACACACGCAAATGTGAGCGTTTGACGTCAATCGCACGGCAAGTTA
CACACTCGCTATTTGTTAATCTCATTGGGCGGTAGGCGGTTAGCACAGAT
GTTTGTCGTAAGCAAAAGTTGGTAATGCAAAGTCTTACAACATTGCAATT
AGCAAACGCAAAAAAAAAACTCCATAATGGCGGCATCATGCGAGAGCAAT
CAGAATACCAAAATAAACAAATGAAGTGAAGTTATCATCAAAAAATAAAA
ATAAAACAAACCTTTAACCTTTCAATAATCCAATTAAACAAAATATTTCA
AATGAATTGATGTTTAAGTTTGAAAACAAGCACCATTTCCACCATATACT
TTTAGAGCAAAAAGCAGAATTTTGCTGAAATCTTCTGCTCTTCCCGGGCA
AATAATTTCTCAGAATATCAGAGAGTCTGGTGCTGAATATATAGTTTAGT
GGGTCAAGCTTGTTTTAGTTCTCTATTTATAGATAAAGCCTGAAAACCTC
ATCTGAGACGGGGGTCATAAACGATCTTTATCTATTTTGAAGTCGTACAA
TCTTTTACTTCTCAAAACCATTTAGATTCAGGTTTTATATATAATAACAA
AACAAAAATTTGTTTCATTAAAGCTATTTTCTTTCAGCGAAATAAGCCTT
TAGTAAATCTTTAAACCCCCAGTTTTATTTCGTTATTTACAATGTGATTT
TATAGCGGGAGTTGGGAACCGGCTAGATTGTGTGATCTGATTGGCTGAAT
GAGCAAACGCGGGACTCGGCCCAGGACTTTTTACCCGCGTTTACAGCAAT
ATTTATTCTTTACGCTTTCGTTTTCAAAATCTGTTGAACATGGATTTTGG
CTTGTGACAATTACCTTGCCTAACATCTGTGTTAGGCGGCGGGCGTTCTC
TAATTCTCCATTCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCG
CTATCAGTGAAAGTTATTGTGACATGTTATGACAGAAAGTATGATTGATA
AACTTGGTGGAGTTATCAAAACAAATTTGTTGTCAAAGAAATTTAACAGT
AAGTGAAAATACAGGCCAAAGTCCCATGTTGCGTGCACTCGTCCCAAGTT
GGAGCAGTTGACGGTATGTATGAAAATACTCGAATACATGCTTTTGTGAT
AGATGGTTTGGCGAACAAGCCAGTCTTTTGAATAACTAATTACTCCACAT
ACATTACTTTCCCTCAGCCAATAAAACATGATAAATTATCTTGTCTCTAG
GTAACTGCCATGGAGTAATTAACCAAAACCAAACCAAAACCAATTAGCCA
AAACAAAAGCCTAATCCTCCAAAAAAAAGTCCAAAAAGACTTGTACCATA
GTTTTTGATGATAATCAGTCCCTGATAGATTTCATTTTTTCTTAGGGTCA
ATTGTTCCAATCTACAATGTGAATTGTCGCAGCTTTACAACAGAAGCTCA
GGTAAGTTACTTGTTGACCAACCTAAACTTATAAGAACACTAACCAAATA
CCAATACAGTAAGTCTAACCTCATATTATGTAATTTCCCGGGTCCTGAAA
TTATCTTTTCTTTGTTTAGGACCCGGGGGTCACTGAACGCTCCTACAAAC
GTATCAACATTTCACAATCTGACAATGATTTCATCAATTCATTTGGGCTT
GTAATGAATGAAAACGATGAAGCCATTTCGGTTGTATTAGGAAATCAGAT
GCGAAGACAGTTGTGGGAAGGCTGTCATACTGAAGAGGAGTCTCGCATGA
TTAAAATGGCAACCCAAAATATGAATCATCTCTTCTTCAACAAAAATTTG
TCTGAGGAAGAAGATTACTTGATAAAGTTATGTAGCTCTGCTCCTGATAG
CACCATTTTCCCCTATGTGTTCAAGTATGATGATACTGCATTCATGCCAT
ATGCCTTCCCTGTGGATTACATGACTGATAGAGATGAGGTTACTAAACCT
GAGGCTACACAGAATTTTGATATGACTGTCGATCCTAAATCCTTTCGTCA
TTCTGAAATCAGAAAGAAGGCTGGTATTTTCTATACCTCTGAATCAGACT
TCCCTGAAAATTATGACGACGAACCACCTTTTCCCAAATCTTCAAATTAT
GCTTGAGAAGCCAATTATTGCATCTCATGGTATATGTACATAGACAAGAC
TTATATGAGATAAATCTACAAAATGCGGATCTCAAAAATTATCTCGCTAA
TATATTTAAGTTTTTGTTATTTTTATCTTAAAATTTGTGTACATAGAGTT
TCGCCCTGTCCTGTCTAAATTTTGTAAAAAAAAAGTGAAAAAGAATTTCA
TTCAGCCATTGTCAAAGTCATGAAAAGGTTTCTTAGTATTTTTGTGAGGT
ATCTTCTTCAGGGATCTGGGTACATGGTGAAGGTGTATATAGATTATATT
TATTCTTACTCTCATTATTTTTTTGTACATAGATATTTTTGATCTGTATT
ATTTTGCATTTGGTAGTACAGAGTAATAAATTATTTTGGAAAGATAACCC
AATGTTCCCTTTCGATTTTGAAGTGAATTAGAAAGTTGCTATTCTAAGTT
TCTCACATTTTGAAATGAAAAGCTTCGTCACAAACAAATTTTCAAAAAAA
TTCATGATAAAGCTTTTTAGATATTCAAAATTTTAAAACACAAGCACTCT
AAAAAAATTTGATGTGTCANCCTGAAAATTATGACGACGAACCACCTTTT
CCCAAATCTTCAAATTATGCTTGAGAAGCCAATTATTGCATCTCATGGTA
TATGTACATAGATAAGACTTATATGAGATAAATCTACAAAATGCGGATCT
TAAAAATTATCTCGCTAATATATTTAAGTTTTTGTTATTTTTATCTTAAA
ATTTGTGTACATAGAGTTTCGCCCTGTCCTGTCTAAATTTTGTAAAAAAA
AAGTGAAAAAGAATTTCATTCAGCCATTGTCAAAGTCATGAAAAGGTTTC
TTAGTATTTTTGTGAGGTATCTTCTTCAGGGATCTGGGTACATGGTGAAG
GTGTATATAGATTATATTTATTCTTACTCTCATTATTTTTTTGTACATAG
ATATTTTTGATCTGTATTATTTTGCATTTGGTAGTACAGAGTAATAAATT
ATTTTGGAAAGATAACCCAATGTTCCCTTTCGATTTTGAAGTGAATTAGA
AAGTTGCTATTCTAAGTTTCTCACATTTTGAAATGAAAAGCTTCGTCACA
AACAAATTTTCAAAAAAATTCACGATAAAGCTTTTTAGATATTTAAAATT
TTAAAACACAAGCACTCCAAAAAAATTTGATGTGTCAACTTAATCTACTT
AATTCTATTATTCTTTCCTCAAACTATGCGAGTGTTGTTTTTTCGTTTTG
TTTTTCAGCAGACAGAAGAAGTTGAGAATGTTCATGTCATTTCAGACACT
GAGAGTGTTACAGGTAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004124TCONS_00004124Clytia hemisphaericatranscript
TCONS_00004123TCONS_00004123Clytia hemisphaericatranscript
TCONS_00004122TCONS_00004122Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004124-proteinTCONS_00004124-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:399911..404178 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
435.01	489.52	446.14	412.84	174.49	128.61	150.67	164.03	321.71	299.36	567.58	489.27	421.01	380.66	389.86	423.83	204.22	366.9	250.27	299.23	525.03	536.45	352.4	487.46	347.63	393.03	416.51	427.38	216.24	218.02