XLOC_002010 (gene) - C. hemisphaerica

Overview
NameXLOC_002010
Unique NameXLOC_002010
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000030:199593..203081-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002010 ID=XLOC_002010|Name=XLOC_002010|organism=Clytia hemisphaerica|type=gene|length=3489bp|location=Sequence derived from alignment at sc0000030:199593..203081- (Clytia hemisphaerica)
AAATCATTTTAAACTAAAAAGGACCTGTGTAAGTAGTGGGACCTTAATGT TAATGTTATAATGCACCCTTTGAAGCTTTAATATTTATAGTATCTTTTTT TCGTTTAAGGCTAGAAATAAATAGAAAATAAATCCAAAATGTCAGGTGGC TCAATTGGTGTTCCTATTAAAGTTCTTCACGAAGCTGAAGGCCATGTTGT GACGTTAGAGACACTTACAGGTGAAGTTTACCGTGGAAAATTATTAGAGG CTGAAGACAATATGAACTGTCAAATGATCAACATTACCATGACTGCACGA GATGGTCGTGTCTCACAGTTGGAACAGATTTTCATCCGAGGAAGTAAAAT TCGTTTTGTTATCTTACCTGATATGCTGAAGAACGCTCCTATGTTCAAAA AAATGATGATCCAAAAAAGTAGTGGTGTTGGCCGTGGAAAGTCTGCACTA CTGAAAGCTCAAGGTGAGGAAAGAATATGATTTGACACCCTGTTCTCACA GACCCACCGGGACCCCCTACCCGCTGGAAGAATTGGCCAAAATATCTTCC CCATTGGGTAATTATATAACGAGAAAATAAGCAAATCGTTTTAGTCCATT GGATGAAAATCCTATCGGGTCTTTAAGAAGGGGGTGTGATTTTGAGATGT CAAAGACGTCATTCAAACAAAAGACGTATACTTTCGGTACATAATATATT GATGGCCAAACGTTTTGGCAATATGTTGCATCTAGACCCAACGAATTTCT GAAACACTAAGTCTGCATTCTGCCTCAAGAGTTCCTCCCTCTTTACCCAC TAAGTATTACTTCATATTGCTGTAATTTCGACTCAGTGTGAACTTAATTA ATAAAATCAGAGAATGAATGTACGCTCTGTGTTGTCCAAGTGATAATCAT TGAGAAAATATACGAAAGAGTATTTATTGGTAAAAGAACCTGTTTCAGGG CTACTTAAAGGGAAAATAAAAATTATTGGTTGTTTTCCTCAGCGTATAGA CATTGCTAAGATTATTGAATGATGTTTTAAATCTGAAGCAGTGTTAAAAG TTCTTCCGTCTCGATGATGTACACATAAAGATGCTTTCCCGTCTCAAAAT CCTGCATAATTCACCAAAAGTTCAAGAATTATGTGCTAATTTGATGTTTG AATTACATTTTCATAGTCTCGTACAAAAAATCTTGTTTTGACCACTGCTG AAAATATTGAGTAATCATTCTGATTCCTCTCTCCTCTCTCTCGTTTTAGT TGCAGCGCGCGGTCGTGGAACGGAACGTGGAGGCTCAAGAGGCGGATCCA GAGGATTCTTCCCAAGAAGACGTTAATGTAAACGGGGCTTTAATAGACAC TTTTGCAAAACTAAAAGATAATCGACATATTGAATTTGATGGTGGACATT GCATCATGGACATTTTTTAACATTCGTCAAAAGTGAGAAGGAAAAACAAG ACACTCGTGTTTAAATAATTCAATTTAGAGCATAGAGACATCTGAACGTT TTAAGGCTTGGAGCATAATGATACCAATTCTTTGTAAATAACCGATTGGT TTAGAAGTACCTAATTAAAACGGTATCCTTTTTATTGTTTATTTTTATCT TTTGATTTTAAAGCGTTATACTATCAGTGACGGAACGTTGGTTATTGAAA GATAATTAATAACATTTTTTTACATTTTAAAATAAAACTTATCTCGATGG CCTCCTTCTGATCTACCTTAAAGGAATTTTTGTGATGACTAATTTTAGTG AAGGATATCGACAACTTATTTTGGCAATTACATGATTTTTTGATTTTGGC GAATGACAGGATACCAGTTCCATTTAAAAAAATCAGGGGTTTGATTTTTT TAATTACACAAAAAATTAATTTCGGTGAAGACAGAAATTTTAGTTTCAAT GAGGAGCAATAGACCTTTTCATAAATTACGTCACGAGCAACGCAAAAATG AGGTGATTTGAAAATGGGTCGATTTGAAATGGAAATGGGTCTATGAAAAT TAACCTAATTAGAAAACGGATGTGACAAATTAAAATGAAAATAAAACTTT TACTCAAATCAATATTTTTCATCAAAGTTTTCTTATTTCGAAATTACCAA AATGATATTTTTAAATATAGCGATAAATGGATAAACTATTTACATAATAT ACATCTTAATGTTTACAGTACAAAATATTGTGTTTTGTTTTTTGCAAAAA AAAATATTAGTTTTAAAAGAATTGTCAATTAAATGACATCACGGAATAGC TAATTGGTAATTGCTGACGGGGACAGAATTTGCCTTTTTTAACGTTACTA TTGCAGTAATTGTTCTAAGTTTTGGAAGTAGGAAACAAATGAAACTTGTT TCCCTGATATTACTAGTAGGAAAATAGAGAAGCATAAACTTAAAATCACC CTTGAAAAAAAAAACAAGGAAAAATCTAAATTTACACTAAATTTAATCTT GATAAATCTGACGAAAAATTTAGGCTATTCTTTGACAACTTATGATCATG GGGAGAATAAGCTATTTAATCTGATAAAACATATAAGGCTAATTTCTGGC CCTAATTGATCGCGTGATTTACGTCAAAATTGAGTTTATTTTCAAAGTAT CAAAAGCAAAATTGATGACCAACTCATGAAAAGTTTTCAATTTAGTCCTA TCCTTTCCTACTCTGTGAAATCTCGCAAATGCAACGACTGAATTTCAAAA TTCTTTGTAATGTAAACTTGGTTTTGTGTGAGCCGGCTGGTTTGTGTAAA TCAGCCTTTAATAAACGAAAGGATTTTAATCCATTCAATGTATGAATGAT ACCCCAGCTTAAGTTATTTCCCAGTCTCTTTTAGTACCCCTTTTATAACT TTTCATTTTTTGATTTTCAGTTTTTCCAAATTCTATAATATTATAAATAT TTTAATCATACAAATCTCTGCATCCTTGAAACTTACATGTTTTTATAAGC ATGTGAAGACTCAGTTTTCGGTACTCAAACAATTACTCTATAAAAACATG TATGTGGAGAGTCTACTTTTGCATATGAGAGAACATACCGGTTCCAAAGA AATGTTTATAGCATTTACAATTTTTGCCAGAGCACAATCCAATTGATGAA GAGTGTGAACTACATCCTTTGGTGATCGCTTGTCGGTTCTTCGCGCAATG AGTACAGTTGCATCGAACGCATTTGCATAATCCGGAGTTTCTTCGTTCTT TCATTTTTTTGACGTGTTTGTTTGGTGTCTTGCGGTGATTGTCTGCGACT CGGCGCTTCAGGATGTGTCGCTGTGTTGTTTTGTATTTTGTCGTGTCTTG TGTGATTTGTGTGTTACGATGGTCTTCACTTTATAATTTGTGTAGTTTTA CTGCAATTGAGTTGCTTAGAACGATACAGTAACTAGTTGTAACCTTTTGA TATTTTGCGTTGTTTTCCCCGCTTGATTCTAACTTCTATAACGCTTGTCT GTCGCTATGTATAACAATTCGTTAGTAGAAGTGTTGCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003602TCONS_00003602Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003602-proteinTCONS_00003602-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000030supercontigsc0000030:199593..203081 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SNRPD3small nuclear ribonucleoprotein Sm D3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
92.69 85.03 219.97 248.69 218.23 158.16 97.79 103.51 81.68 70.19 63.31 67.46 53.74 55.9 48.19 58.91 72.23 61.14 33.87 46.95 49.9 46.13 73.45 61.67 33.39 35.85 42.85 34.16 42.8 42