XLOC_001130 (gene) - C. hemisphaerica

Overview
NameXLOC_001130
Unique NameXLOC_001130
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:858192..863411-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001130 ID=XLOC_001130|Name=XLOC_001130|organism=Clytia hemisphaerica|type=gene|length=5220bp|location=Sequence derived from alignment at sc0000018:858192..863411- (Clytia hemisphaerica)
TTTTAGTGAAAAATAATGAATTTATGAAAAACAAAAAATGGATACAATTT GAACAAAATATAACAACAACCCGCATGGTTCAAAATGGTGGATGAGGAAG CTACCGAGACATTGGCTCAACGCCATAAACGTGAACAAAAAGAATTGCAA GGTTTTTGATAAATTTCTTATTATGTCAATGTTTTTATTTGTGTGTAAAA CAACTTTTGGGTTTACCATCGGCGGATTTATGGATTTCTCTAAACAAAGT GGCTTTATGCGAATCTTTTTTCTCATTTTACATTTGGCCCTAAAATGTAC TCACAAAGTTGTAGTGCGTGCCATATGAAACAAGCGAATTTTATGTGTGG GGCCTTTGGCGAGGAATGCTGACTGGACTTAGTAAATATACGTCCCGTGT CTGATCTTGGTTGACTAAGAGTAACTCTAAATGAGGTCTTTCGATATTCT CGAGGGTTCTTCGGGTTTAAAACAAAATTATGGGTCTTTCTAACCGTCCT ACGTCTAGACAAAACAAAACTGCTCAAACCGTGNACAAAATTATGGGTCT TTTTAACCGTCCTACGTCTAGACAAAACAAAACTGCCCAAACCGTCTTCT TCCTAAAAGTGACACTATAATAAAGATATTGCTAAATCTCTACAACTTTT CCAGGAAAGATACAAGCACTGAAGCACGGCATACCTAAAGGTGACAAGAA ACGCAAGAAGCAAGTCACAATTGAAATCGCTCAACTTCAAGCAGAACTGG ATCAAAAACAACAAGAAGAGATCGATGACGAGGTATGTAAACAAGGAAGA GATCAGCTCCAAATTATTTGCTCTAGCTCATTGCAAGAGCAAACACTTAT CAGCTACCGATCTAAGCTTTATTCTAGTCATGAAAGCTTAGTAAATTTCA GGTCGTTTAGTGGCTACAGTAATGGGTACCCCATATTTTGATGGTCTAAA TTGGCCTTCCTCTTTGGTTTTTTAGAAAGCATCCGATTAATGTTGACAAA ATATAAATTTATGACGGGTGGGGGACTGCTGAATTCTTTCAAGAATCCCA ATAATTTCTTCGGGGCTACCACCTGAGAACCCCTGATATCGCTTTACTCA TTACGCTGTATGTAAAACTATCCTTGATTTTATATTCAATGGTCTCTGGT GAATTTGAATTACAATATTTTGCTCGCCGTTCCATAGAAAAGTACAACTG TGAACGGAGAAGGTAACACATCACTAAGTGAAGCAGTAGAAGACAAACTG ACCTTACAAGAAAATGGTGAGGCAGATCCGCCGACGGAAGACCGAACATC GCAAAATGGGAAGAAAACTTCCAAAGCTCAGAAGAGAAGAGTAAGTCGTT CGCTCGTGATGCTGTTTGGCGCTTTGATTGGAACTTTGTTTTATTTTACC TGTTTAGTGGTTTGATTCTTTCAATCACCAGTGTTAAAAGTTTTTTCGTC TCTGATGAAAACCTTACGTTGACCGCAGTCGCCGATATCCAAGCGCCATC AATCGTACTGAGAATGTGGTGAAAATCGTTCGATTGGTGCTTGTCCATGG CCTTCAGAAATGTTACCAGGATAAACCACAACCTATAGTATTGATAGGAT TATGTATGATTTCACTCCCCATCTCTCATTAGGAGAAGAAAGAACAAGAA GAGCGAGAGCGCCAGAAGCGTTTAGTGGAAGGTGAAAAAGAAAGCGCGAA TCATGTTCGCAATTTGGAAGCTGCACAATTCGACAAAATTTTGAAAGAAA ATCAACTAAAGATTCGTGAGGTTAGTAGCATGTAACTTCCCTGCAAGTCA GATGGTAGATATCGATTTGCTAGCCAATCAAATACCGTCATTGTGTACTT TAACGAATTCATCCAATGAAATCACCGAACGAACCAAGGGTTAAACCCAC ATTAAGAAAAATGTCTCGAATATTTGATAAGATAACTATTCTGCAATTGT TACTACAGGACAGTTTTATCTTTTTGTTTTTATAATACTGACAAATAACT CAGATAACAAATAACAACCTCAGCGTTCGAAATCCAGATTCTTCCATATG AAGAGGGCTGCTGACTTGAAAAAGGCAAATTCAAAAGTGGCTCATGTGTA ATTGCTAGTTGAAAGTGGGTTTCCAAGCTGCAATCTATACTTCAAGATAT TCTGTTTATGTTATAGAAATGAGGCGCTCGTCTATACTGACAAAACAGAA TGAACAAAAGAATTTCCTAAAATTTGATCTCATGTGGTGCGTTTAAAATA GGTTAAATAATGTCCTTTCAGTTCTTTTGTTTGATTGTTTGATTGATTTG ACATTTCAGGTACAACCAGATGGAGATTGGTAAGTAAAATCGAATAACTG AAATATATAAATTATATCTTGAAACTTAGTATCTCACATTTTGTATGCTA CTATACTAAAAATGGATTTATGAAAAATTCATGTCACGCTATAGCCCAAC GTTTGACGGCATTCCCGATCGTCACGGCTGCGCTCATTGAAACATCATTT ACGCCCGCTTAAAACGGTAAAATGAATAACGATTCAGGTTTTTTTGGAGA AGAAGTCGCTGCAGTGTCAGTCTTTCGCGAAATGAAAAACCCACTTTACC GTGGAAATAATCGACGTTTTTTGTTTTGTTTTTTTGGGAACCTTTGAACA TAAGGTACCCGTTTACCGCAAAAGTTAAGGGTAATTAGGAGATCCAATGA CGTTTTTTCAGATTTTTGAAAAACTTTAAACTGCGATATCTCGAGTTTGA AAGGTAGGTAGGAGGTCGTCGACCCTTCATTGGGTCGAAGACTTTAATAT TATAACTTTGCGTTTTCAGCACCTTGACGTTTTGAGTTTTAAACCATTTT AAGTGGTAATCTTTCGTTTTTCGGCTTATGAATCCGAGTTTTTGACCATT TACTATCAAAAGGGCTATTCAGCTTCACCCATTTTTTTTTTTTTTTTCAT TTAATGACAGCTATCACTAGGAGCATTGTGTGCGTTCAGCAATACTTGAC CGGCGTTTGCAACGACGAGAACCGTCTAAATTGTATTCTAGAGATACTTG AAAATATACCGGGTGACCCAAAGTTCGGACGGTTTTCGTTGGGTAGGGTC TGAAATAAAAGTAATTTAAAAGATAGAGGATGCTCTAACTTAAACTTTGA GCTATTACTTTTTAAATTTTGTTCAGTGGTTCTTCATTTATGAGCTTTTA AAGTCAAAATTCAATTATTGGAAAGTGAAAAAACACGTCAATTATATTTC TTTATCTTTAACATTGTGTTTTTCGAGTGTGCTGATGTTTTACAACCTCG TTAATTAGTGTTGTAGGTAATTAAAGTTTATAAAATAATAAATTAACAAC GAAGTAGATTTATATAAATTTACTGTAAATATTTTTATCAAAATATTTTG CAAATAGGCAAAATTTGCTTTCTTTATGAAAATGTCGCGTCTTATGAAAG AACAGAGAGTGTGGGTTTGCCTGGAATATGCTAGAAAGTGCATGGTGGTG GTTCTTTTCTGAACGCATAACTTGTTAATAGATTTTGTGAAAGTAAAGAA TCTAAAAAAAGTTTTAAAATTGAATAAAAATATCTAACATGCTCTTTTCT AACGATTTAACGACCTTGCTTGATTGATTGATAATAANNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNTAAAATCTTTTAAAGTACCTTGTA GGCTCGCAAATAGAAAATTAAGAACGTAGACAATTCACTCTTTAATTTTT CATTTCCATCTCGTTTTCTCTGATTTCAGTCTGTATAATTCGGTTATCGT TCAAAAGTTTGGTTCATCCACCAAAGTAAGTTATTTTTGCTGTTCTCAAC AAGTGAAATGAACTGTCTCCAACGTTTTTACCTCAATTTTAACATTGTCA ATAATTTTGAACTTCTAAATATCGAGGGTACTGTAGTATTATTAATCACT GTTTGATTTTTCAACAGAATCTATCAGATTTCTCTATACCAGCAGATACC AGCACTGTGTAACCAAATTCTAACCTTTTCTTCGTCTTATTTGTGCTTTC AAGGAAGCGTTGAAAGAGTTACGGCAAAAGACGGCAGGTTTTATGCGAAC GAATGAAGATGACTTTCTTCCTTTCACCTCCAACACGAAAACCGGTGACA TCCTTAGCACTGGTGAGTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002169TCONS_00002169Clytia hemisphaericatranscript
TCONS_00002168TCONS_00002168Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002169-proteinTCONS_00002169-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:858192..863411 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
OTUD6AOTU domain-containing protein 6A Homo Sapiens
OTUD6BOTU domain-containing protein 6B isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.89 38.03 32.38 23.56 87.83 70.46 62.76 63.96 50.08 48.75 35.65 26.87 21.88 20.58 15.42 14.78 33.01 30.83 11.95 15.55 23.35 19.92 23.89 24.32 46.69 49.86 15.31 10.93 15.01 17.47