TCONS_00002169-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00002169-protein
Unique Name	TCONS_00002169-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	223

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00002169-protein ID=TCONS_00002169-protein|Name=TCONS_00002169-protein|organism=Clytia hemisphaerica|type=polypeptide|length=223bp
MVDEEATETLAQRHKREQKELQGKIQALKHGIPKGDKKRKKQVTIEIAQL
QAELDQKQQEEIDDEKSTTVNGEGNTSLSEAVEDKLTLQENGEADPPTED
RTSQNGKKTSKAQKRREKKEQEERERQKRLVEGEKESANHVRNLEAAQFD
KILKENQLKIREVQPDGDCLYNSVIVQKFGSSTKEALKELRQKTAGFMRT
NEDDFLPFTSNTKTGDILSTGEF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_001130	XLOC_001130	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00002169	TCONS_00002169	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003323	OTU_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 40..67
None	No IPR available	COILS	Coil	Coil	coord: 11..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..139
None	No IPR available	SUPERFAMILY	54001	Cysteine proteinases	coord: 137..211
IPR003323	OTU domain	PFAM	PF02338	OTU	coord: 164..214 e-value: 2.6E-5 score: 24.6
IPR003323	OTU domain	PROSITE	PS50802	OTU	coord: 158..223 score: 13.425

Blast

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BLAST of TCONS_00002169-protein vs. Swiss-Prot (Human)
Match: OTU6B (OTU domain-containing protein 6B OS=Homo sapiens GN=OTUD6B PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 8.127e-35
Identity = 83/212 (39.15%), Postives = 131/212 (61.79%), Query Frame = 0

Query:   12 QRHKREQKELQGKIQALKHGIPKGDKKRKKQVTIEIAQLQAELDQKQQEEIDDEKSTTVNGEGNTSLSEAVEDKLTLQENGEADPPTEDRTSQNGKKTSKAQKRREKKEQEERERQKRLVEGEKESANHVRNLEAAQFDKILKENQLKIREVQPDGDCLYNSVIVQKFGSSTKEALKELRQKTAGFMRTNEDDFLPFTSNTKTGDILSTGEF 223
            +RH++E+KELQ KIQ +K+ +PK DKKR+KQ+T ++A+L+ E++QK +EE++  K TT   + N   S AV     + EN    PP          + SKAQKRREKK   E+ER++R+ E E E+    R++E+ +  +IL   QL+I+++  DG C+Y ++  Q         +  LR +TA +M+++ +DFLPF +N  TGD+ +  EF
Sbjct:   17 RRHRKEKKELQAKIQGMKNAVPKNDKKRRKQLTEDVAKLEKEMEQKHREELEQLKLTT---KENKIDSVAVNISNLVLEN---QPP----------RISKAQKRREKKAALEKEREERIAEAEIENLTGARHMESEKLAQILAARQLEIKQIPSDGHCMYKAIEDQLKEKDCALTVVALRSQTAEYMQSHVEDFLPFLTNPNTGDMYTPEEF 212

The following BLAST results are available for this feature:

BLAST of TCONS_00002169-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00002169-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
OTU6B	8.127e-35	39.15	OTU domain-containing protein 6B OS=Homo sapiens G...	[more]

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TCONS_00002169-protein (polypeptide) - C. hemisphaerica