XLOC_001110 (gene) - C. hemisphaerica

Overview
NameXLOC_001110
Unique NameXLOC_001110
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:293139..302599-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001110 ID=XLOC_001110|Name=XLOC_001110|organism=Clytia hemisphaerica|type=gene|length=9461bp|location=Sequence derived from alignment at sc0000018:293139..302599- (Clytia hemisphaerica)
AGCTGCAAAGAAAGTACAAAATGATGCAAAATTACATGCGATTAATAATA ATTATCAAAGAAATGTTCATGTTAAAAAATTCGAAATTGATTTGAAGTAG CTAACAATTCTCTCTGATATAAAAGTGACGTATATACAAAATATTACGAT TTCCTTAGCATACGATACACTGAACATTACAACTATTTTATTTACAAAAA CATGGTACACGAAATAATTCATTTTTTGCACAAATCATCATTTATATGTT CGAAAAGCTCTTCACCAGTCTCAAAAGTTTTAGCGTTAACATCACCGAAA CATCCCTCTATCCTCTTCGCTAAAAATTGCCGGTAGTATAAGTCTTGCTT TTCAAAATATGGACAATAATACCACGATTCTTCCCCGTTTAAAATAAGGA TGTAAACATATCTTTTGTTCTTTTCCTTGTTAAGGGGATGGTTTTTCCAA TTAAACTCAGTTTTACTCAAATGCCCGTCTGATGATAGTTTCATGCCTTC CAAGCTAGAAGAAAAATGAATTTCTAATGGTTCTTGGTTTACTTTAGAAC GATGGTCGTTTACTTTTCTTAAAATGGCCGACGCCATTGGAACATAGGTA AATTTAATATTAACAACAGTAATGAATATCTTTCGAATCTCCTTCATACA ATCATCAGTGAAAAAATTTGTCTTAGACACGACCCAACGGTACGTCATAT CGTAAACATCAAAGTCTGGATTTTTTATGACATCAAATAGTGTCTTAATG ACTGGGTGCTGCATTGAAACACTATACTCAATTCTTTCACGTGTTTCAAT ATTTCGATTTAATGGAAGCCAATCTATTGGTTTATAATAAGTGTAAGTCC TAAAAACAATAACTGCCCATTGTCTCTTGTCCTGCAATAACTCCAGATAT ACGAGCATTTCATCAGCAAAACGGATATCACGTTCCATAGAGACAATAGT TTGTTTAATGTTTTTGTCGTTTCCCATGATTTTCTCATCGTAAAGCTGCT TTATTAGTTCGGCGATTCTACGCAGTTCGTTATCAAATCGAGATGATTCA AATTGAAACTTGTTTGTTCGAAATTGAAGTTGATTGATATTGTAATTCTT TCTCAATCTGACTATGTCAAAACCGTCGAAGTAGTTCACCATAAAACATG CTTCATTGTCAAGTAAATCGTTTAATCCTTGCAAGAAAAAATGGTGATCA AAAGTAGCATGGAAAGTATCAGCAAAATAATCCTCATGAAAGGTTATGAA GGTGACGTTCCTGAATTCTGAACACCCTAACATTGAAAAGTCGTTGAAAT TCTGCACAACACCATTGGAAGCTGTAAAATAAACACATGTTGATATCAAG AATATCAAAGTTACATGAAACATGTTTGTTTTCTTCTTATTTTTTGCCTT TAAACGTTTTCAGTGTCGACGATAGAGTGTTATTACTGCTATGCATTTAA TCTCAGAGTTTTTTGCCTTATCTCTTTCACTTAACTAATTTATTTGATAT AAATTAAATGAGACCTACCTACCTCGTTAAAATAGACTAATGATGCGATA AGATGGGGATAAGATCACGTAGGAAAAAGTCCAAAATGCTATTTCATGTC ATATCTCATTTGTTAAATTATTTTCCTTGATCATTTTAGTAATCTGCATG ATCTTTTCAACAGTATAGGTTATTTGCAATTTTTCTACTAAGTTTCTACT CGCAAAAGTTTGTACGCCTAAAGTATAAATATTACTGCTACTATGGATTT AATCTAATCTGAAAGTTTTTTTGCCTTCTCCATTTCACTTAAACAAAATA ATTACTGTTAATTAAATAAAAAGGGAAAAATGAAATTAATCTGTTGCGTT TGCTTAAATTACTTAACTTTGTCGCTACCTCGTTAAAATAGATTGATGAT GTGATAAGATCACGTGGAAAAATTGGCGAAATGCTATTTCTTGTCATGTC TCATTTTTGTTGAATTACATGTTTTTTTATAAGAATATCCAAAATTTTTG AAGCCTGCAGATGTTCTTAACTTTTTGAGTTTTAAGCCTAAAAATGTTTT TAACATGTTCTTATTTTCACCATTTTGTGAATATTTTTGGCCATTTTCCT AAGAAATAGGGTGTTTTTGAGTCCAAGAAGCACATCGTCCTTAGTGTATT GGTCTGGTTTTTTTAGATAATGCATCGCGCAGAAAGGGGTTTCCAGATCT TGTCATGTTTTATTTGATTGACGCGTTATTGACGTAAACCCCCGTCTTTG TCTCGGAAAAATAGGAAAATTTCAACTTTTACCCCCTGAAAGATCGAAAT TTGGTCAAAATTGGTCAAATTTGTCCCGCTAAGGGTCACAAAATTCGCAA AATTTTCCTTTGTTTTCTCCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NGGTTTTCCACCAAGGATTGGCGATCAGGTTGTACAGGAAAAATAAGAAA AATCTTTTATTAAACTGTTGCTTGAAAAAACTGGCTTTTAAGGGGGAGGG TGGGTCGTGCTTGGAGAATTTGGTTCTGTACGTCCTGATAGGTTCTGATG TTTTCATCAATAGAATCAACCGACGAAGAAAAACAGTTTAGGTTTCATTG ATATTCGGTAGCCGTAAAAAAAGCGTATGTTTTCAAACTATACTTCCATA ATTGCATTAAGTAAATAACGCTTCGTAATTATTTCTCTGAAAATAGGTAA CAGTCGGAAAGAAATAGAGAAAACAGTCGATTTTGGTAAGAATTGGAATA CTTTTGATAGAATACAAGGTACAAAAAGATAGAGAAAAGAATAATGAAAT TGTTCGTAACATTCCCATAAACTTCGAAAAAAAAAACAATCCTAAATTCC GAGGGTTCTTGATACTTTAAAACTGTTTTCACAATATACTTTTTTCACGA TACACGCTTTTTTTAAGAAGAATACACTTTATAAGAATGTCGACGATGAA ATGGCCAAAAAATTAAGAATAATGCTAAATAATATCACCATCATATAATT TTGCTACTCAAGCTAAGAATGCCATTTCTAGAGCATTTTCGATTATAAAT TGTCAATTACCCCCAAGTAAGGATCACTCCTTTCACAAAAATGTCAGTTT ATGCTTGAGACGTATGTACTAAATGTTGAATCTAGTCTGAATTAGGATTC TAATTTAAGAATGCTGTAAGAATATTTTAGGATGATTTTCCCAAAAAAGT TGAGAATATCCATGATGAAATGGATATACACCGTGTACACCTTTTTCTGG TTAGCTGTTTCGTATAAAAAGTCACCAAAATTTCGAGTAAACAAATCATC CCATTGGTTAAAAGCAAAAACATGGTTGTCCTTTTGCGGGAGGCTAGGAA CCTTTAGTGTTGTACTATTTGTTCGTGTTACCTATACTATAAATAAAAAA CAAGTTACTGAACCTACTGCAGAATCTATTTTGTCGGCTAAATCCTTGAG GTATATGGCAACGTGGAGCAGTTTGGCTAGAGACAGATCTAACTCTTGGT ATTATTGTGATCAGTATACCCAGTCTCTCCAAGCTTGTTTGTTTATTTCA GTATCGTTGATCGTGCTAGTGATGATTCTGTGAGTCTAGGTAGATCAGAA GCCTTTTGTCTGAGGTTTCCGTTTGATATCGATTCCAGTTTCCGCCAAAT ACTGAAAAATAGCGATTCTGTATAAGGAAACGTAAGTGATGATAATTTGG GTTTATTGACGGGTGATTCGTTGCTCATCATATGTGAGTTAAGGATTCTG GATTTGAGAAAATGATATTCTTTAGAAATAGAATTTTTAATGCTGAGAAG GTGCCTGTTGGTACCTGTCGGCTAGGATATTTTACGTTTACATAAAAATG ATTACGAAGTTTTGTGTGGAAAATGTGCGTTGAAAATCTACTGTCCGTGT TGACTTGAAAAACTCAGTGTACCTGTCAACCAGTAATTTTGTATGGAGTA AACGAGATACTGAAAACCATAGGGTACCTGTCGGCCAGGAACTTTTTCTG TACGGAAAAGACGAAGCACTCTTGTAAAAAGATCGAAATAAAAAATTAGG AGCTGTGTGATGAACTGTCAGTCAGGAATTTTTGTTTCAAAGAAAAAAGT TAAAATCCTATACCTTTTAGAGCCTCATAAAGTGTAGTTCCGAAATATTT GGGGAAAACGAATGTCGGGTGTAATCTGTCAAAAGGGGATTGTTGTAGTG TTTTTAGGTTGAAAAGAAAAGAACAATTTTTCTTTGATGTAGAAAGATTT TAGCCGTATTGTCGTCCTTATCAAAATTTATGCACAAATTATATAAGGAA TAATCTATTAATAGTGCTAAAGTATAAAGTTTTGAAAATTCGCATCAAGG TCTCTTTGATGATTGAGGACTGATGTAGAACAGGTCAAGGAGTAGTCATG TACATAATCGAAGAAATGTGTGCCGTTAGGGATAATTAAAGGCCAATAGT AAGCTGATTTTCATACTGGGACCATTAGTATTCCTTTTGCCTTACAGTCT CAACAATGTTTTAGTGTTTTTCAAATCAAGGAGATATGCGGACACAACCA TTTGAATTATACTTTCCAGTTTGTTGTGAAAGTGTCGACATATGATGTTT ATGGACAATTATTGAAATGCTTGGTATTGAAATCGTCGGCGAATCTGATT ACGGTGATTAAGCCCAGCTTAGATTGCACGTGGCGGAATGTTTCGTTTTT ATAGACCAGTTATCATTGTCCTTTGCTTTAGAGTACCAGTACATGTTGAT CTCTCTAGGGCTCCAGTTAAGTTGGACTCTGAAATTATGTTTGACTGCTA AGTTTTAGACGTGGACGGCTTGTTAGTGAAGGTGCGGTTTAGTCCACCTC GATAATCTTTGCTGCATTCAGGTTGTCTGTTTTAATGGCTACCGTATTTG AGAAAAGATGCGCTTTGATTAACTCAGGAACAACCAGTATGGCTAAGAGC TCTCTAAAAGTGGAGCTTTTGTCCCATTTTTTGTGAGATGAATCTTCCTT TGGCAATTATGTTTCCTTTGTCTTGTAGTAAATAGCCTCTGTAACCGAAT TCGTTTGCGTCGGTAAAAACAATTTTGTTTGACTAGGTTTGTGTTTTATA GACGTACCGTTAGATGATTCGAGACTTTTTGACCAGAATTCGAGTTCCCA TATTGCTCCTTCAGGGAGAATATGTTTATTCAGCCATTGAGGATTTGCCT CTATGAAGAAGTATAAGTTCCTTGTCATTAATCGGGCTATGGAACCTAGC GCCGGTGTCATTGAGATGAGATGTCCTGTTATCCTGGATATGTTTTTTGG TGATGATCTCTAGTTCGTTATTGAAGATTTTATTAACTGTAAGACTTTTG TTATTTTCTTTTTTGGCTCTGAGAAAGTCATATTGGTTGTGTTGATGATG AAACCAAACCACTTTCTAACTTTAGATGGAATCAGATTGGACTTTTCGAA GTTGATTGTAAGAACTAGGCTAGTAAGATCTTGTATCACCATGTTGACTA TTTCTGTGGATTCTTGTGTATGATTTATCTCCGCAAATACCATCGACTAA AACCACGCATCGAACTCCCATAGATCTCAATTTTTTAATGAGGGGCCTCA AGAGCTTGGTGAATGCATAACATGCTATCGAGAGACCAAATGGCAAGACT TTAAATTGAAAATACCTTCTTTTCCCTGATTCGAATTTCCAAGAAAATCC AAGGTATTTCCAGTGTCCCTTTGTAATAGGTACGTAATGGTAGCCTGATT TTAAGTCTAAAGTGCGCCGAAGTAAAAGTCTTTGTTCGAGTAGCTCGGCA ACGGTTTTCAAGTTTTCGTATTTGAATTTTATTTACACGAGGTATTTGTT CACGTACAGTCTAAGACTAGCCTTAACTTTTCATTTTCCTCGGCGACTGT CAGAGGATTTACACAAAAAGATGGTGCAGAAATCCATTGGACACAATCAT TGGCTAGTAACTCTGATATTGTAGACTTGACAAAATCAGGGAAATGTATA CTTGACTTGTTATTTTTAGCAAAAATGGAGATTGCCACTATTTAAATGGT AGGTTGATGTCTATGTTTAGCACAAATTGAGAAGGATTAATCGAAAGCCA ATTGTTGAAATAGTGTCTAATCTTCCAGGTGACTGAGGATGCGTTGTGCT GATATGAATAATTTAAAGAGGAAAAACTTACATTTATTTGATCAGGAAGG CTGGCTTAGAGTCGTATATTTTGATTTGGGACAGCTGAATGCAAGAAAAA AAATTTTGTTGAGTATGGTTGAAAAGTTTGTAAGCAACTTGTGGTTTGGT AAACAACGATAAAAGTTGAATGTGTTCTTGGAGCTGCGAAATTTAGAAAA TTGAATTCGTAGAATCGTAGAGGGAAAAAATTTCCGGGAAAATTATGTTG CAAGTGATGAAACAAGACAAATCGTTTCTTGGAAATGAGAATTTCTAATT GAGAGATAATAAGATTATATATAAGGGCAAAAACACAAAGCCTGTGTGAA AGGATAAATTAATATATATTATACAGTATAGGTTTATCATATATGTTTAC TGATAAAGTATTTGATTAATTTGCAGGTTATATCTTCAAGAATAATTTGT AAGATGCTTGTAGAGGCTCTTCCCTGTGCGATTCTTTTCTTAGTGGGCAA TGGATGGCGTAATGTCCAAAACGTAGACAATTGAAACATTTAATGTCGTC AAAAGATTTCTTGGTAGTGGTCTGTTATTGTTATTTTGCCTATTATTTTC GGGGAAATTTGCTCGTCAGTTTAGATTTAGTGTATCTGTCCCTAATCTCT CTAGCTGCTCTACGAGCATTTTTCAACCTTTTATTTTTTCGTTGTCACTT GATAGGAGGCGTCGTCTTTCTAAAATTCTGACGCTGTAAGCCAGTCGTCT TGATCGCCTATCATAATTAACTTATTTCTGTCTTCAGGAGTTGAGGTGTG TTTGATTCTTTCACCTGGTCTGGTCCTGTCCAATTCCTCCTTCAGTTCAT TTATTTCGGTCTCTTGTTGCAGCAAGGATGGATTGATGATGTTGGTGTAT ATTGTCAGCAACACGTTGTTAGATATTGCTTGTAGTTGATCATTTGTTAG GTATGCTAATCACCCTTTGTGCTTGTTGGCCTTCCATTGTTGATGCTTGT AAAGATATAGTTCGATCTAATTTTGTTGTTGGAGAATTTGGACGGACGTC CATCATTAAAATTAAAAAGGGATGCAAGTGGATCTGGATACTAGAATATG TCTATGAAAGATGATGAGAATTTAATGCAAATATTTCCAATGGAAAAGTT TCCACGACTGATACACAATTTTCTTATAAGAACATCATGAGGCTTCGATA GCCAAAATGCGAAGACCAAGTTAAGAATATTAAGTCTTATATAAGTCTTT CTGGACTCTAAAGCATAAAATTACTTAGAAAATTGCACTAAACTACTCAA TGGAATCAATACAAAATGGTGAAATCATAAAAACATTTTAAGAACATTTT AGGCCTTAAAACTCAAAATTTAAAAATTTCCAAAAGTCCGTAGAACTTTT TGATGTTCTTATAAAAAAACATGTAATACACGTATTGAACGATGCATTTA AAATTGAATTTACGTACGCGCATCGATCATTTCGCCACATTTCACTTATT TCGTACGCGTTCATAGCATAATAAAGATTTTGAAACAATTTTTTTTAAAT TAATTAAATTCAACATAAGATTTCCAAAAAAAGTTAATTACATTATTTAC TATCTGCAATTTTCTTTAGTTCAAAGAAGACTATACACTTTCCATGCTGA GATTAAATGTTTACAAGATTGAGTCGAGAAGGTCTAACTTTAACTTTTTA TTTAAACATTTTGTCAATTTTGAGGGAAATGAGCATTTCTCATGATTGGG TTGGTATTTTTTCTGATTTTTCGCACAATGATGAATAAAATAATCTGATG GAGCCTGACTTACGAAAAAATAATTTTTTGGGCAAATTTGGGCCCCAAAG TGGCTATAAATGGGGTGTGTAGAATTGAAAGTTTTTTTCTGATTTTTTTC CAATGAAGACAGAGGGAAAGGTTCTCTAAAGAGGGGCTGAAACTTTTACC CGGAAAATTATATCTGGCCGTAAAGAATATATTTTTGTATTCGGAGAAAT TCCGTCAGTTTTAGGGAAAATGAGCGTTTCTCGCGATTGGCTTGATATTT TTTCTGAATTTTTAGTCTGAATTTTCTATTTTCATTTTTTCTATTTTTTC TTTTTTCTTATTGTATCATCCTTTCAGCATGTAGCTTGTTTGGGCTTAAT AATTCACTTAACTCAATAGCATAGCTTAATGATATGGCAAGTTCTAATTA CTAATAAGCCAAATTAACAACGAAGTTCGTCAAAAAAATCATCAAAAATA AACTATTGGTTGGAACTACTCGGAATGACTTAATTTTTAATCTTGATAGT TTTGTTATTCTCCTGGTATCAAAAGTTTGTTGAATAATATATCCGGGGGG TGGACGGCCTTGACGGCCGACGGGGACGTGCCACTTGAGTTTAAAAAATG GACTTTGTCAGAATGAAAAAACGAAAACTTTTTCTATTTTCACCCTGAAA ATTGTCAAAAGTTACCAAAAGTCAATTCTGTCAGATACACATCTTGAAAA TTAGTAAATTTGGGACCCTGATATCTTCAGAGCATAAAAAGGGACCCTGA CCAGCGGCACGTCTGCGTACCGAATTTTACCTATGTGCTCCGAATAAATG ACATTAAATCAGGAATCACAAAGATGTAAAAAGCGTTTAAAGTATTATAT ATAAGAGCGTGAATCTCTAAAAAGACAAATCAAGAAAGGAAATAATGGAT AAGAAAGATTATATATATTTTTTTTGAATTACAAAAATACACAGAAAATT ACAGCTACAAAGAAAGTACAAAATGGTGCAAAATTACATGCGAATAATAA TAAGTATCAAAGAAATGTTAATGTTTAAAAAATTCTAAATTGATTTGAAG TAACTAACAATTCTCTCTGACATAAAAGTGACGTTTATACAAAATATTAT GCATTTCGCTAGCATACGATAGCACTGAACATTAAAATTATTTTATTACA AAAACATGGTACACAAAATAATTCATTTTTTGCACAAATCATCATTTATA TGTTCGAAAAGTTCCTCACCAGTCTCAAAAGTTTTAGCGTTAAGATCATC GAAACATCCCTCTCTCCTCTTCGATAAAAATTGCCGGTAGTATAAGTCTT GCTTTTCAATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002127TCONS_00002127Clytia hemisphaericatranscript
TCONS_00002126TCONS_00002126Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002127-proteinTCONS_00002127-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:293139..302599 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.91 1.65 1.62 0.55 1.09 1.17 1.47 1.69 0.76 2.45 0.36 0.31 5.05 4.4 2.42 4.2 0.98 1.11 3.37 9.29 1.25 1.62 1.53 2.45 0.15 0.29 9.19 2.37 2.05 4.01