XLOC_001005 (gene) - C. hemisphaerica

Overview
NameXLOC_001005
Unique NameXLOC_001005
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000012:581544..589069-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001005 ID=XLOC_001005|Name=XLOC_001005|organism=Clytia hemisphaerica|type=gene|length=7526bp|location=Sequence derived from alignment at sc0000012:581544..589069- (Clytia hemisphaerica)
ATAGAAATAAATAATAGAAAAGTAATAGAGAGTACAAACTGTGGTTAATA TTGCATTCAAAACTGCTCGGTTAATATTGCACCATGACTGTCTTTCCATC AATGGTAAGATTTTTGGGTTTATGGTTTTATGTCGTGAACATATGTGAAC ATTGTGAACATTTTAGAAATATTCATAGGCTTAAAGTTCAAAAAGTAAAG AACCTTCGAAGGCTTACAAAAATTTGGATGTTCTTCATAAAAAACATGTA TTATTGTGTTTGTTAAATAACGCCCTGAAAATCATTTTATCCCATCATTT TCCAGGGTGGTCGTGATGTGGAAGATCGGAATTTCTTAACATTCACCATG CCTTCGAACATGCAATTAGAAGACAAAGGAGAGTTTAGCACGTGGTGTGA GAGGATGATCTTCATCTTCGAAGATTTAAAATGGCTTCTTGCACTCCCTG TCAATGAATTCTGGAATCAGGTTAGTCTTTCGGAATAGAAATTCTAATTT CATTAATAATCTACATAACGATTTTTAGGTCTAATACCATTTCAACAGCC TTGTGGTCTGGATGAAATATTTCATCCAAAAAGGCTACTTTTCCTTGATT TTCTATCCTTCTTGTTTCCTTTCTATTCTCCACATTATTACTTTTAGAGA ACTAATTTTGGCAATCATCACCAAAATCAAAATAATTGTTGCCTCACCAA AGTACTCCCCAAAATAAACTTTTTTGATTTAGTTGTAATATTTGAAATTT AATTCCTAATTTTTGCGAAAATGCTCATATTTTAGGCAAAAAAAGTTATT CGCCAAAATTAGTGCAAAACAAAAAAATGTCCTACAAACGTTTAAATAAA GTTTCATTCAGCAAGAGTATTCGCACATATTTTGCGACTTATTTAAATTC TATTCTTCTTCAGGTCCTACATGATACAACCTTGACATCGAGTCTTGAAT CGTTTCTTCAAAATTCACCGAGGTATAAAGAAGCTCTCGTTTACTAATAG ATAAACACCATAGAAGTACTGTAGTGTAGATTTCCTTATATTTTGACAAA CGTTTATTGGAGTTTCATGCTATATTATGGGAATCCCAAAGATTTTATTT AGATATTTAGTCTGAACAGTTGCGACTTGACCGTGGGATAAGTTTGGCGG TTCGTACCGACTATTTGATTAATTATTGAACTATATTTCTAGCAGACACA GAACGTTTTTCAAACGGTCATCTGACGCTTTGCTATCTCACCACTCTCTC TATACTAGATTTTATGATTTGAAGAATATCCCAGAGACATGTAAGACAGC ATTGGGTCGAGTCAGCAAATTATACCTTTTGGTCATTCAGCGGATGAGTT TACATGATGAAGATCAGGTTTGTCGATCGTTTTGAAGATTATCCCTTGAA AATGTTGATAAATTATAATAATATTTCCAATTTCGATTTTCAAGGGGAAT TGTCTTTTTATCGAATAAGAGAACATTGAATTAGAGAGCGACAACTGTAT TTTATAAAGCTTTAGTTTGTATCATCATTAAATACAAGGATCATTCCTGG ACCTGGAACAAACTCATTTATTGTTTTATGAATTTTTTTTGTAAGACCTT TAACGAATTTCGTGTTTATAGGTAAGTGGCACCTTTGACTAATAATAGAA TTTATTGGAGTTCAGGATATTAAAACTCTCATTTTTTCTAACTGTGCACT CTTTTTTGCTACAGTGTGGAATCCATGTTGGTTTAATGTAAGTAATTCCT TTGAGAGTGGTTTCTACACGATAGCAAAGTAGATTGCGAATGGATATATA TTTATTTTGTTTGAAATATTCATTTTCTGATTNTAGCAAAGTAGATTGCG AATGGATATATATTTATTTTGTTTGAAATATTTATTTTCTGATTAGAACC AACCGATGCCAACTGAAGTATTCGGTGATATGATTTACGAGAATTACATT TTCGATGCTGCCAAATTGATAGACATTTGCGCCATCTTTCAACGGCCAAA CAATGATGAGATGCAAACGTTCCTGGGTACTANTGATAGACATTTGCGCC ATCTTTCAACGGCCAAACAATGATGAGATGCAAACGTTACTGGGTACTAT TATGGAAAATGTTTTCGCATGCCAACCTAAGTATGTATTGTTAATTCGGA ATCTTTAGATTACGATAGTGGTGGTAGCATGAAGGTAAAGCTTCAAGCTA CAACGCGCAAGGTTGTGGTTTCGAACCCTATGTACCGGGTCATATCAAAG ATTCCCTAAATTGTACTCGATGTCTCTCTGCTTGATCCACAACAACTAAA GAGAAGATTAAGTAAGCTGAGAAATCCAAGGAAAGGAGTGGCGTCCTCCC CTACCTCCGGGTAAACAGCTGAAGAGAAACGGGAGCAATTTCGGCCCTCG ACTGTGGTCGCGAACAATACAACTTTAAACCGGAACCATTTTGCCCGGTT TCTTTTGCAGTTTCATAGAAAGGTAATAAGAAAGGTAATACTATATATTT TACCACAACCATATTTCAATTTTATAATTTCAGCTACTACAATGACTTAT CAAGCGCTTTTGAAAGTATCATAGTGACCATTTCTAACATGGAAGAGAGG CTGCAACCACCAAAAGGAGGCAAACCTGTCAATGGAAGAGAAGCAGTAGA CATGTTGATGTTTTTATATGACATGACTTGCTCACTATCTGCATTTTTGA ATGTTTTCCCTAAAGCTTCTTCATTGCTCTTTCGTACTGATCTCATTTCA AGGTAGGTATTTCCCATATTAGTCATATTGTATCGTACATACTACGCTTC TCTATGAATTGAACATTCACAGCGAACGCAAATTTGTTCGAGTTATGGAG AGTTTGGAGGACAGAGAGTCGTTCGAAGATTTATGAGCTGAAAAAAGACT GAAATAGTGCGTGTTTTCATTTAGATCTCAAGCCAAATGATACCGTTGCA GAATTTTAATTCTGATTTATCTATTCTGTTTCACCTTATAAAAGATTGGC GACTATTTACGAGACAATGGTGCCCATGTTGATGAAATTAATTGAAATCA ATCAAAAGAAATTCAAATATGTTTGCGCATGTGTACAAAAAGAACTTCTT CAAATTGTCACCTTTTCCATCAAAAACGGTTTTGTTGCAAGAACTAAAGA TTTGTAAGTCAGAATCTATTTACTTTTCATTTATGTCCACAAAATACAAG TTGTTTCGTTTTTTAACATTGATTTGTAGATGGACTGTCTTAAGAACTTT CTCCCCCGCTGGAAGATTTTCCCAAAAGTCATCTCTTAGACAGGTTACGG TAAAATCGAATCCGCATTTGGAAGTTTCACAGCAATTGCATCCCCATCGC AAACAAAACATTCAAAAACATCCCACCGTTAGTTTTGAGTTGAAAACATA GAATTTATATCAATTTCCATTGAAGTTTTAATCCCCACTAAATGAGAAAT ATCCACCGGGACACTGAGAAAACGATGGCAAATATCATTATATGTCATCT GATATCTGGATTAGTGTCCACTCACGCTAAAGCTTTAAAGAAGCGCTCGA TTTACCATTCAAGAGCAATGGCAGTCGATCTTTGGCGTGCCGCATCCTCA GTCGGGTTCAACTGTACTTGCATGTAAGCCTAAAATATTTCGGTTGGACC CGCGAATCCCCGAAAATGAGCGCTGGGGGTTCAGGGCTCCCGCTGCAAAT TTTGTGACGCGCTCTGGCGACTCTCTCTCCGACTTTCAAAGCTTAAGCGT TTCGGAAGAAAATTTCCACATCGGTTGCCAATCAAATGACAATGCAAAAA AGTAAAAACTAAGTATCATTATCGTTTACTATTAACCACAAATTTCATAC TTTATATTTTATTGTTTTGTTTCAAGGTCTAAAGATGAAAATGAAGAAAA AACAGCATCATATATTTCGATCATGGATTCGTTGTCTCAGTACAAACGGT AAGTCAATAGTCTCTAAGTATGATAATGCGTGCACAAATTTAACTCAGCT TTTGCTTGAAAAAAATAATTTTTGTCTTTCTTCATCAGATTTTTCGCCAG GTACTGCATGACCAGTAATGTTAGTGAAGACTTGGAACAAATCAAGAAAC TGGATGTCATTGATATCTCCAATTTACAATATTTGAGTAACATGGCAGGT GTCGTCGTCCACGAAACTGATACTGATGACGTAAGAATCTTTGATCTCGC GCAATAAAGTGTAAATAGCCGTAGTCATTCATCTCCGATGTAGGATTTAT AGCTACTTAATACTTACATATATGTCGCGCGGTCCGCGTAGTTTTCACAC AAACGGGGTTGTGATAAAAAAAGATGTCTCATCAATGAAAATACCTTAAA AAGGTGAAATGTTATCAACTTGTTTTGCATCATTGCTTTGCCAAATACAT GTCAGGTATTCGACTGTAGTAGACTGGAGGTTGATAGATGTGTTAAAGCA GTTAAGCTCTAGTTTAAACCGTCGAATTTCTGCCTTGCCTGCCTTCTTAG AGTAGGCGAAAAGTGGACAGAAGGTTGGCAGTTAAAATCTTTGCTTGGAA AAGATAAAAGAATTACATTGACGTCAAAAGAGGGCATTGCATTGTCTTTA AACAGCCAAATTTCTGTCTGTTTAACTCACAACTTAACCAGAGTTAACTT TTTACCCTGCATCTTTAGACTTTGAAGCAACTTCGTGAATTACTGCCCAA CAAATCCGAAGAATTCATTCGTAACTGCATGTCTCAGTATGGTTCCAACG TTGAGGTCATTCTCAATAACGTGATGGAAGGTAACATTGTCGACGAGACG CTCCAAAAACCTGTCAAGAAGAAACCACAAAAACTAATTCCTGATAAGGA GTTTCTTGAAGACAATAAAGAACACGTGGAACGTGTTAAACTATCATTCT ATAACCAATCAGAGGAAGGCAATGATTATGATGACTATGGTGCTAATTAT GTTAATTATGATAATGTATACGATGACGAGTATGACGATACGTATGACTC ACAAGACGTCGGCGCCGCTGACACGGATAACGTAGATGAATTGTATAAAA GGTATAGCATTTTTTTAAATCAGTCCAACGAGCAAGTATCTCAAGGGAAT CTCGAGACTAATTTGTTTGATCTACGGTTGTACTAAACGGTTTTTTTTCC ATTTCATCAAGATATTAACTTTTTGGGAACATTCTTACAGAATTCTTACT TTAGCATGCAAACCCAGTGTAAATCTACATTATTATCCATATAGCGGTCA TTAAGTAAGCCATTAAAGGTTCAATCGGCGGGCGGTATTGAAAGGTTCTG TGATTCAAATTGTCATACCCGCGCTGAGGAAACTAAAGCGCCAGGCTTCA GAGGTCTAAAATATCATTAACGGCCCGGGTATAGGGCTATAACATCATTT GCGGCCCGCTCGGAATTGGATTGAAGTCGTTGCATTGAAGCGAAGAGACT AAACTAACGTCAGAAAAAAACACTTTTTGGTCATTTGCGGCCCGCTCGGA ATTGGATTGAAGTCGTTGCATTGAAGCGAAGAGACTAAACTAACGTCAGA AAAAAACACTTTTTGGTCATTTGCGGCCCGCTCGCAAGGTGCTAAAAATT TGTTGAAGACATTGCATTGAAGCGAAAAAAAATCGGTTGACGCTAGAAAA AAATGTTGTTTGAATGTCCGATATGGATAATAATAGTAATAGTGTTAAGT TTTCGTTCGTTGATGTCATTAATTCTGCCCTTGCAATTTGATTATTAGCC CTCTAGTGCCATTTGCGCCCTCCGCTTCGCGTTGGGCCCAAATGACACTA TCGGGCGAATAATCAAACTACGCGAGCAGAAAATAACAACAACGACCTCA AATTGAACGCTTTTGTTATATTTAATTTATACGTCAACCAAGAATTTGGC ATTTTTGTAATACTTCTTAGCATTGCTGGGGAATTGCCAATTTACAGCTT AAAGCACCTTTAGTTGGCTTAGTCCAAAACATCGTAAGAGATTGAGTACA AAAATATAACGGTCGTAATGTAAAGGTTAAGCATTCGGCTATAGGGCGCA AAGTCATTGGTTCAATGCTGGTAGAATAATTGGAAAAGCAACCAATGGTT TTTGATGCTTCTGCAAGGGTAAGCAGAACGATCTAGGGTGTGAAAGAGTG GCGCCTTCGAGTAGCTAGTTATCAAGAAAATGGCTTCGGACATCGCCGAC TGCTGTCGCAAGTCTTACTTAAAATGATACGTTAATATTCTTTTCTCTTC ATTAATGACATCAGGAAATTCACGGTACCTCGTGTTCTTCAACAAATGAA TCGAAAATCAAGAAGAGGAGAACAAGAAGATGACGAAGAAGAGAGTGAAG AAAGTGACGAAGAAGGGAGTGAAAATGATAACGAAGATGGTGGCGAACAA CAACAACAACAACAACAACAACAACAGAATCAATACAAGGTTTGTCTTAC TTTACCGGGTGGTCCAAAAAAAAGTTTCCATGAATTTCAAATTTTGACGT AGAGTGCTCTAATTGTGCTATCGACTTTAATGGGTAGAACTGGACTTTTA CACCTATCAACCTATCTTACATCACAAGGGAAACGGGTTTAAGTTTATCA TGGTTCTTCTTGCAAAAATGTTTTAATGGTGGTCCAGAAATCGATACTTG GTTCTTTCGTACCTTTCTTTAATGTACGAACGCCGGTGCTATTGGCTAAT TTAGAAGTTTGCCGAATCTAATACAGTGTTTAAAATTAAAACTATTTCGT CCTGTTACTATCATTCATTTACATACAATTAATTTATGTATTTTTTTCAG GGTAATAACAATAGAAGAGGAGAATGGAAAGGTGGTGAAGTTTCAAATAA TCGTGGTGGTGGCGCACGGGGAGGGCGTGGAGGTCAAGGCGGAAACAAAC GAGGCGGTGGACGCGGAGGAAATAAAGGAAACAAGCAACAAAATAATGAT AAATCGCAAGGAGGACAAAAAGAAGGAAGTAATCCTTCACAACGTGGTGG CCAACGTGGCGGGAGAGGAGGTCGTGGTGGGCGTGGAAGAGGCGGGAAAC GTAATCATCGAGCCTTGGCTGATAAAAAGATGTCGAAGGGAATGTTTTGA AATCATCACCCATCGTCACTTATTATTGGAAAGCTAGTTATTATGAACAG AAATACTTGCTTGCATCAAATCTCTTCGATTAACATTAAGTCCAATAGAT TCAGGTTACTATCTTGAAATATTATCTTGAAAAATAACACTTTACGTACT AAGTATACATACATTAACATTATATTTTCCATTACCGTCTTTGTAAAACA AACCAATAGATTTCGGAGATTAAGATAAAAATTATAAAAAACGAATCCTG GAAATTCCTTTTAAAACGAGAAACGGAAAATTTTGGAAAGTGCATCCCTT TTAACTGCAAAACTATACAAATTTGACGATTTATAAAAGGTATTTTGAAC TATTCTGATTCTAAATTTTGGCTCCTTGATGTTTTACAAACGGTCTTCCA TAAGAATTCTTTTGTATGTTCTTTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001943TCONS_00001943Clytia hemisphaericatranscript
TCONS_00001942TCONS_00001942Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001943-proteinTCONS_00001943-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:581544..589069 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ASCC2PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.08 11.6 3.07 1.85 18.7 14.5 14.71 14.63 11.62 12.41 13.2 9.74 6.62 8.32 7.29 9.6 8.33 8.57 4.57 5.06 6.08 6.83 14.23 11.72 12.31 13.13 8.35 9.28 10.06 11.62