XLOC_000835 (gene) - C. hemisphaerica

Overview
NameXLOC_000835
Unique NameXLOC_000835
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000011:782140..786616+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000835 ID=XLOC_000835|Name=XLOC_000835|organism=Clytia hemisphaerica|type=gene|length=4477bp|location=Sequence derived from alignment at sc0000011:782140..786616+ (Clytia hemisphaerica)
GTGCAATGTAAAAAATGGCGGACATTTGAGGCATTGTTCCAATAACCTAG AACCTTTACTCTAAATTAGGAGCAATCATTTTCTTTTAGGAGAATTCTAC TTGCAGCATTCTTTTTTTGATAGAGTAAAATATCTACTTCCAGTCTAGTG AAAAACCGTTCTGCAAATTACACATAATGAAATCGCACATGAGAatcaaa acattcttttttCAAGATGGCCACCTCAAAAATGGATGTAAACACAGAAT CTGttgagaaaaaaatggaaaatgaaaaattttcaggagatgAGGAAACG CAAGGTTCGGAAGTCACAGtttcaagaaaaagaaagaaggaaaaagttga aataatgGAAACAGATTCtgcagcaaaaaaaacaaattttccgCCAGTCG CAATTGAAGAAGGGGTAAGTTTTGGAGAGGGggtctttctttttgtttgc cAACTGCCCTCCTGTCGACGCACTGAACTGATCAATGATCAAATGATCAA TGGACCTACACTGAAAGATGCATATAATTATTAACATCTAactttttgtg aaaaatcttttaatattttttactcGGGTGAGTTAAGGAAAGTCCAAAAC ATTTTGCGTGACGCCAGCCGcttcctactgtttttaccaaGTCATGCATA GCTCTAAAGAAGTGTATTAATGTGAGGATCTCGAAAAGTGCTgcgtcaaa aatttaaaatgaccCTATCTCAAAATATTGGCTAAAAACTGACTTAAACA TTATAAAATACTGTGAGAGtggagagtgggtaacttgcatcagtggaggc taacatgcatagccctaaaatgaatgacctggctggtcattaaaataaac tatattccgctcgcagctctactctaccatttttgttttgatttaacttt gtattttaatgaccagacgggtcattcatttgagttgagggctatgcatg caagttacccactctcacagTACATCGAATCggaaatgtaaaaataatgt tttacagacttatatatatcataaaaattgaaataaaaaaatgatattgA TAAATATCTGAGGTCTAATCTTGTCTAATCTTGTATATTATATTGTTTAG GTTGGCAAAACAGAATTCAGAAAAGTACCAGTTCCTTCACACAGATATAC ACCCTTAAAAGAAAATTGGATGAAAATATTTACACCTGTTGTGGAGCATT TAAAACTTCAAATTCGATTCAATTTAAAGAAAAGAGTTGTTGAAATAAGG GTTTGACTTTTTTATCTACTTAACTGTCTACTTTTTTTACTGTTATTAAA TGACCTTCAACCATTTTTATTTCACTCTATATATATTCTAACTTTGCTga atgatgtgtttatctttgtaaatatgaaaaaatagcAGAATGGACTTTTG CCCTTTTTCTCGATGTCTCAAAAAcggaaaattaccataatttttagatc gcattagtcgacagaaaatgaccaaacaattgactgaacatgaagggtac tatgatgtagtttctaacctgatgtgtaacctaattgttttttcgctgat tttctcaaaaaaccgcAAGAgctgattattacgtaataatcgatgacaac atcaaaactaaaaatttaatttctcaagaatggtttatccaattgtcttc aaactttcaccaaagatgtatcttactaaagttgatcatttgaaaaaaaa aatttcgaaattttgataaggtcagcagaaattagtgtaaaacaaaaaat cctattttctgctgacgtcatcaaaatttcgaaaacattttttttcaaat gatcgactttagtaagataaatctttggtaaaagtttttcaaatgatcga ctttagtaagatacatctttgcagggctgcaaataaatatttttagtctc tcggacatcatgtccgactgAAACACAATTCagtcggtcaaactcaaaat tcagTCGGTCATTCTGTACTTTTTTTTGTGGATATTTAACATAATAGAAA ACAAGACTTTACTATCACTTATTACATTTTTGAGCATATTTGCCCAAATA GAGACGGTAATTAGTATTTAGAATTAAATGAGACAGGGTGTTTAGAGATA GCAAAAAGTGTGATTCCGTTCGATAAGACATGaagcaatgaaaaatattt cctttgaaCGATCAAAAAAGAGcagtttgtgtaatttacgatgtgcgatc caacgatccacgatgcacgaataagttttcataatgctagctacaaacat catataacaataacaaaaaaaataaaaatagaagaggaaataatttatca taatcagaatgattaaaataacttatatcttctgtgtagaaaaaccaaaa agtgatagcgagagaaagaaaatgtttgctGCATGCCTCACTcgtttttg aaatgaaagaaaaagccttgacgtcatagaaaagttttggcgcgaaaaat ttattaaaacacaaactcatttttgtacgtttattatttttttaagaaca gNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNaacattgtaaatttttgtttataaccctgtctcaatccaatgca ttcggttggtttaatcggagaaacgttttCAATGGGTTATTGAATTTATT CTATTATTCAATTCTTATATTGGAACAACTATTTTAGAATCAAAAGGTAA TGTGATCCTTTTATCTCTTTTGCTCCTTTATAAGGTttgataatttgttt ttttttcattcggacatcGTGAccaacacaaaagattttcagtcggtcaa atggCTTTTCcagtcggacattgaccgatgaccgacgcttatttgcagcc ctgtctttggtaaaagtttgaagacaattagataaaccattcttgagaaa ttcaatttttagttttgatgacgtcatcaattattacgtaataatcagtt tttgcggttttccGTGAAAATCACATCaagttagaaactacatcatagta cccttcatgttcagtcatttgtttggtcattttctgttgACTAAtgcaat ctaaaaattatggtaattttaagacatgccataacttacccgagtttCCT AATTTAGTTAAATCTTTTCATTTAGACATGTAAAGAAACAACAGATACAG GAGCAATTCAAAAGGCTGAAGATTTTGTAAAAGCATTCACTCTTGGTTTT GAAGTTGATGTAAGTGAATTGCTTGACTAGGAAGATCTACATTATTTTCT ATTGTCAGTTAtgattttaaatctttaaaaaaatttcttttcctttGATA GGATGCCTTGGCACTTCTAAGACTGGatgatttatttttggaaagttttg aaataaatgaTGGTAACTAATTTCtactttgaattttgttttgatgatat tTTCATATATGCCGAGCTGTAATAATTATTGTTACTATATAAATGTTACT GTtgaagaaattttccaaaggtGAGATTTGCATTAAGTTTTTTTGTATTG CAATTGTTCTTTTTTCAGTAAAACCATTGAAAGGAGATCATCTTTCAAGA GCTATAGGAAGAGTTGCAGGGAAAGGTggtaaaacaaaatttacaataga aaatgtaacaaaaacaAGGATAGTACTGGCAGACTCGTAAGTATTTTTTT GTCCTGAAGCAATTGGAAACTATATAGAATTTGTTTTCCATATAAATTTC AGAATATAAGATTGTTTAATATAATGTTTtgtccttttctttttttagca aaatacACGTGCTTGGgtcttttcaaaatataaaaattgccAGAACAGCT ATATGTAGTTTAATATTAGGTAAGTTGATAATAATTATTGCCAaagtttt ttattaatttcatcAATCATCTTTTTATTAATCATAAAACAGTCACTGTA AAATGCTGATTCCAATATCTTGAAATAAATGACAACTTTACCCTCTTGAT TCTTAGGAAGTCCTCCTTCTAAAGTATATGGAAACATGCGAGCAGTTGCA GCACGATCTGCAGAAAGATTTTAAAACCCACCAATGCTTTGTGGTTGGCC ATCAACTATGAATCTATATTGCTTTTGTTTTTACTAAAGGCTATACAACA GATTAATCTAATTTTGTAAATTGTATTTTTGTCGTTATAAATAtgtaaaa ccaaaaaaaaaacaagtaaaaCAGAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001603TCONS_00001603Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001603-proteinTCONS_00001603-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:782140..786616 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PNO1RNA-binding protein PNO1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
119.96 113.75 44.23 36.58 114.83 85.13 81.8 85.07 124.12 83.38 168.5 222.28 215.78 221.26 176.57 153.59 98.54 147.47 89.73 87.21 215.76 195.98 127.84 136.79 136.79 182.56 96.22 129.11 65.51 74.55