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XLOC_000762 (gene) - C. hemisphaerica

Overview
NameXLOC_000762
Unique NameXLOC_000762
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000010:801784..810745-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000762 ID=XLOC_000762|Name=XLOC_000762|organism=Clytia hemisphaerica|type=gene|length=8962bp|location=Sequence derived from alignment at sc0000010:801784..810745- (Clytia hemisphaerica)
TCTAGATGAAGTAAATTAATATGTATGAAATAGAATGTAAGAAAAGGTGA GGAAAGCGAAAGTAAAAATGGCGAATAACAATAATACAAGCAAACCAAAA GGACTTTACTATGAAGATGAGCGGATTGTTGTCAACGCCCATGGAATGAG GGCTGGCTTAATGTTTCCTGACTGCTATGTTGTAATAGATGATTGTAGAG ATGGTGATGCGGTCCCACAAGATGTAGAAATGAAATCAGAACTTGATGTG AAAGTTCAATCGGATCCAGAGGACCTACACAGTCAATCAAACTTCTCAAA TTTGAGTATTCACAATGGTTTGTCTATTGATGACTGTGGATTACTATCTA GTGAAAACGAGGACGTCAAATTAGAAATAATAGACGAAGACCCTCAAATG CCGGTCACACCCATTTCAACGACAGTAAAACTAGAAAATGTTGAGCTTTT ATTACCACTTGAAGCGGTTTTGACAATAAAAATGGAAACTAATCAACATG ATACTAATCACATCGCTCTAATTAATGTTGAAATGAATTCAGAAAGTTTT GTACCGGAAAACCGAGAAAGCGTGGTAGATGAGAATAACAATGGCATTGA TTTGAATAATCTTGTTCATAAAAACACTCATCACACTTCTGCTGAAATTA ATGCTGTCCATACAGTAATTCATGAAGACGAATCTATTGATGAAAGTGAA GATCATTGTCGAATGCATACAGAGCCTAAAACACCTGGTAAAAATTGCAA AATCAATAATTGTGATAAAACTGATGGAGTTACTGAAAATGGGGACATTT CCAATGAGGCTGAAATTGATGATGATGATGATTTGAGAGCTTTCATTGAT GTGGACACATTTGTTTTAGCAAACGAATGTCGTGTAGAGTTAAATGATTG TCTGCGTAATGAAAAGGACAAGACTGTTGAAAATGGTAGTGATAATTCAA TTTGTGTCGATAAAAACGAAGAAAATATGGAAAGTTTCGTTGAGGACGAA AACGATGAAAATTTACTATCGAACCGAACCATATCCAGGATTAAAAAACA TTTTACACATTTAGAAAAAGGAGGAGATGAAATTTCTTTTCGGATTGTTT TGAAATCAAACTCGAGATTTTATTACAAAACTTGTGGCATTCAAAAAATC CATGAAAATCCACATCAATTGGATGAAATAATGTTTTTCGAAGAAACATC ATCGCAACCGAATATTCGTTTAATCACAGAATTATACGCCCTAACGCAAA ATCAATCACAACAATATCTCATAAACAAATACCCAACAATATTATTCATT TCGCAGATTCAAACCGTAGATTGCATATTCTCATTATTTCTACTGTACGT TCGAACGAATGTTGATTGCCAAATAGTTGGTACAATACTCTGCAATAACA ACAACAATCAAGCGAAAGTGTTGAAAGAAGCGTTGACCGAATTCAAAAAG ATCAACAGTTTTTGGACACCCAAATATGTAGTGATTGATCCAAACCAAGT CATCCTTAACACTGCTGAAGAAGTATTTCCAGGTACAAGAATTGTTTTAA TCCATTTTATAATGAATTTGTTTGCTTAACCCTTTCGGGAAAAGTTCTTT AGCCGTACAAACCTTCGCGAGCAGAAACTTCCGCGAATNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCA ACGACAGTAAAACTAGAAAATGTTGAGCTTTTATTACCACTTGAAGCGGT TTTGACAATAAAAATGGAAACTAATCAACATGATACTAATCACATCGCTC TAATTAATGTTGAAATGAATTCAGAAAGTTTTGTACCGGAAAACCGAGAA AGCGTGGTAGATGAGAATAACAATGGCATTGATTTGAATAATCTTGTTCA TAAAAACACTCATCACACTTCTGCTGAAATTGATACTGTCCATACAGTAA TTCATGAAGACGAATCTGTTAATGAAAGTGAAGATGATTGTATGCATACA GAGCCTAAAACACCTGGTAAAAATTGCAAAATCAATAATTGTGATAAAAC TGATGGAGTTACTGAAAATGGGGACATTTCCAATGAGGCTGAAATTGATG ATGATGATGATGATTTGAGAGCTTTCATTGATGTGGACACATTTGTTTTA GCAAACGAATGTCGTGTAGAGTTAAATGATTGTCTGCGTAATGAAAAGGA CAAGACTGTTGATAATGGTAGTGATAATTCAATTTGTGTCGATAAAAACG AAGAAAATATGGAAAGTTTCGTTGAGGACGAAAACGATGAAAATTTACTA TCGAACCGAACCATATCCAGGATTAAAAAACATTTTACACATTTAGAAAA AGGAGGAGATGAAATTTCTTTTCGGATTGTTTTGAAATCAAACTCGAGAT TTTATTACAAAACTTGTGGCATTCAAAAAATCCATGAAAATCCACATCAA TTGGATGAAATAATGTTTTTCGAAGAAACATCATCGCAACCGAATATTCG TTTAATCACAGAATTATACGCCCTAACGCAAAATCAATCACAACAATATC TCATAAACAAATACCCAACAATATTATTCATTTCGCAGATTCAAACCGTA GATTGCATATTCTCATTATTTCTACTGTACGTTCGAACGAATGTTGATTG CCAAATAGTTGGTACAATACTCTGCAATAACAACAACAATCAAGCGAAAG TGTTGAAAGAAGCGTTGACCGAATTCAAAAAGATCAACAGTTTTTGGACA CCCAAATATGTAGTGATTGATCCAAACCAAGTCATCCTTAACACTGCTGA AGAAGTATTTCCAGGTACAAGAATTGTTTTAATCCATTTTATAATGAATT TGTTTGCTTAACCCTTTCGGGAAAAGTTCTTTAGCCGTACAAACCTTCGC GAGCAGAAACTTCCGCGAATTTTGCGAATTTTGGCCCTTTTCGCGGAAGT AAATGTCTTTAGAAAGACTAATAAGTCAAAGGACAAATGTTTCAAGCCAA TCCAAGAAGTATTTGTATTAAGTATTAAGCCATTTTTTCGTGTTTAAGTT CCNTTGTGAGTGATTTCTGACTGGGTGACAATGTTCGGGCATAGCTTGCA TTTACCACACGGTTTCGTGGTGTTTTGACGTGGTGGTCTTTCCAATATAT CATTTCGCACGATTTTGTTGGCGATTGTTTTTCGGTNGAATAAAAACATA CTGGTGTAAAATATTTCGCTCTCTCTTAGAGCATCTTCAGTTTTTTTGAA TAACAAAGACGTTTAACAATTATATTTAACGACGCTAGAACGGCATTAGA ATGACTTCTTCAGTTTTTGACGTCACGGAACATCTGGTACACTTCTTTCG CGTACCCGTGGCAGTCTTTGTTGAGACCTGATGGAGCCAGAGTTTGGAGT CTGCACATCCATTTATCTTCGGCTCGTTCTCTTTCTGCAGAGGATGAAAA GTCACTTTCTAGGATCATCACCTCAAGGTCAGCAAANTTGGAAAGAGACC GAAAAATTCAGAGTTGGCAGAACATTTCCATCGCGACCACTCCTTTGCTG ACCTTGAGGTGATGATCCTAGAAAGTGACTTTTCATCCTCTGCAGAAAGA GAACGAGCCGAAGATAAATGGATGTGCAGACTCCAAACTCTGGCACCATC AGGTCTCAACAAAGACTGCCACGGGTACGCGAAAGAAGTGTACCAGATGT TCCGTGACGTCAAAAACTGAAGAAGTCATTGTAATGCCGTTCTAGCGTCG TTAAATATAATTGTTAAACGTCTTTGTTATTCAAAAAAACTGAAGATGCT CTAAAGGCCGGTCTCGACTTGCGCGCGCTGCAATCGCACTTTTTGGCTTC AATCCCTTTTGCTTGGAAAAAAGATTACGTCATAAAAATGTAGCGCGCGC ACGAAAAAAAAGTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGCCAATGGAGTTGC TTCATTTTTCTTTTGACCAATAGCGTGGAAGCTTTTCTCGAAAAGTGCGA TTGAAGCGCGCGCAAGTGGAGACCGGCCTTAAGAGAGAGCGAAATATTTT ACACCAGTATGTTTTTATTCTGAGTTTTACTTCGTCCGCAATGCTGAATT GAAAGTTTATGCTCGCGAAAAAAGTATTCTGACAACAGACAAGCAGACCT CAAAATTACAATATTAAATAAGGGTTCTTTTTTGCAATGCTCCTACACAA AATGTCCTAGGGGGGTCAGTATGACAACGTTTTAGTGGCGCTCATCTTTT TCAGAATTTTTCGTTATTGAAAAAACCTCCCAAAAATTCCCTAGTCTTTT TTTTCTTCGCGCTATTCTCAACTTCAGTTCTCAACTTCAGTTGAGCTAGA ATCTGAGAATGTCTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGT CTGTCACCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCTA AAACTTTGGGGCAGGCTGGAGACTTCAAAAATGGTCCGATTGGGCTGAAA TTTTGCACACTTGATCCTTGGGCAAATCCCTGGGGGTTTTTTTTTCATTT TTTGAAAATTTTCATTTTTAAGGGCGTTGTCACGAGTTTTCGCCAAAACG AGGCTAAAACTTTGGGGCAGGCTGGAGACTTCAAAAATGATCGGGTTTGG CTGAAATTTGAAACACTTGTTCCTTGGGTGAATATCTGGGGGTATTTTTT TTATTTTTTGAAAATTTTCATTTTTAAGGGCGTGGTCACGAGTTTTCGCC AAAACGAGGCTAAAACTTTGGGGCAGGCTGGAGACTTCAAAAAAGGTCGG ATTTGACTGAAATTTGGCACACTTGTTCCTTGGGTGAATATCTGGAGGTG TTTTTTTTATTTTTTGAAAATTTTGATTTTTGGGGCCTGGGGACGAGGTT TTCACCAAAACGAGGCTGGCAGCCTGGACACTTCAAAAAAGGTCGGATTT GGCTGAAATTTGGCACACTTGTTCCTTGGGTGAATATCTGGAGGTGTTTT TTTTACTTTTTGAAAATTTTGATTTTTGGGGCCCGGGGACGAGGTTTTCA CCAAAACGAGGCTGGCAGCCTGGACACTTCAGAAAAGGTCGGATTTGGCT GAAATTTGGCACCCTTGTTCCTTGGGTGAATATCTGGAGGTGTTTTTTTT ACTTTTTGAAAATTTTGATTTTTGGGGCCCGGGGACGAGGTTTTCACCAA AACGAGGCTGGCAGCCTGGACACTTCAGAAAAGGTCGGATTTGGCTGAAA TTTGGCACCCTTGTTCCTTGGGTGAATATCTGGAGGTGTTTTTTTTACTT TTTGAAAATTTTGATTTTTGGGGCCTGGGGACGAGGTTCAGCCAAAACGG ACAAAGAATATTTGCTACCTAATACTAAATATTTGAAATGTTACAATTGG GCCTTCTAATAACGGGAAAATCTGAAGTTGAGCCCAGTGCGGTGCGCACG TTCGACTATCAAAAAAAGATCTAAAATATTTACCGAATTCGAAAAGTAAT CACCTTAAAATAAAGAATAACTGAAATGCTAATGCTGTAATGCTTCATGT ATTATTTTAATCGGATTAAATTTCGCGAGATTAGATTAAATTTTGCGAGC GAAAAAAATCGCGAAATTTTCTGCATTTAATTTCGCGAGTCAGGAATCTC ACACGTTTTCGCGAGTTTTGATTTCGCGAAAATGGCAAAAATTTATCATA TTTTCGACTGATATTCGTCGTCAATTTATTTTATAATTACTTTTATTTTC AGACTCAGAACTATTCTTTGATCCCGAAATGTGTGTTTACAATTGGGAAA AGCATCTCTCAAATCCATTGAATGGTCTAAGAGAGCATTCAGAGCAGTTA TTTCATGACTTGAAAGCACTTCAAATGTGTTCAAAGAAAGGTCAATATCA TGATTTGGTTCAAGAAATGAGGGATAAGAATATTTGTAATGATAGAAGCT TTCGAGAAGAATGGCTTATGAATGCGAAGGTAAGCTCATCCAAACTAACA GATATATTTTTCAACTCGATTCGCTTATAGTGGTTCTCAAGATTTCTAAT GCAATTTTTGCATCTTTTGGTTTTTTGCGACCCTGACATAAAGCATTACT ACTAAAAAATATAACCCCGAAAAGCTAGAACAGAATCTCCTTGATTTGAA GCCATTTCCTGAACGGTCTTTTACACGAACACTAGTGGGTTAGTAAACAG TAGCGTGATGGGTCGACCAAAATTTGAGCAAACTGGGGTATTGGTAAACT GGTAAATTTCAAAAGTCCCCTATTAATATTTTGAAAATACGCGAACGAAT AGGGCACGAAAATATGTGGGTAAATTTTCTCTTTTTTTGCTGAAAACTGG CAATTCTAACGTATAAAAAGCAAAGGGGCGCCGAAAGTGGTGAATTTAGA GGGAGGACTTTGCAGATCATCGGGGAAGAAAACAACCTTGTCAAACATAC AGTAAAACCCATAAAAAATGTTCTGTAAAAATCCTTCAGCCAATCAAGGG AGGTGTGAAAAGGGCGAAAAGTAGACATGGAAAATTTAAATGTGATGCTT GATGATTTTATGATTTTACTTTCAGAAATGGGTTTTCTTGCCAAATAATC TACAAAGTCTCCTCAGAGAAGATTGGATTGTTGAATGCAAAAAACTTTAC GAGACGACACTCGAGAAACATTCGAACGAATTGGACATCTTTGATCTACT GCTCCATATTACTGACATAATCCCAACGTCCAGATTCCAAAGGTATTAAT TCTTCTTGAATTGTAGGAGTACCGGTATGTTACTAATTCTTGATATGCGT AAGACATTTTTCTAACGGAAACGCCCGAAAAAAGCCGGGATTTGAGTAAG ATTTATAAAGCCCGAAGGGCTAGATGTCGTGCTTTAAGCCATCGTAGGCA AANCGCCCGAAAAAAGCCGGGATTTGAGTAAGATTTATAAAGCCCGAAGG GCTAGATGTCGGGTTTAAAGCCATCGTAGGCAAAAAAAATGAATATTGGG AAAAATATTGTTGCTATTGTTTTCGAAAACCCGCGAAGCCTCTGATTGGT CAGATTGAATTTCTATTGTAATGTCACGTGACCTAGGGGTAGGATTTCCT ACCTAACCACGGCACACTTTTCAGTAGAAGTACGACATCTAGTCCTTCGG GCTTTATAAATTTATTGATTTGACTTCTAAAACATGGTTGTCAAAATCCG GCTGTTTTCGTAAAACTCCCGTAAGAAAGTATGACGTCGCCTGGACTTGA AGAATGATGACCTTTCTGTAACTGCTTAAATAAAGTGTATCGCAAGGTCA CAAACTAATACAAGAAAATAATACTGATGTCATGGTATTATGGTTGAACG AATTTCAAGAATTTTTGTTCATTTCTTAATTCAATTCCAGGAGAAAACCA CCTTTTATCTAAATCATCTTCGTTTTTTAGATACTGTCTCAAAAACAGGG AATTATACATCAATGTACAAAACTCGTTCACGCGGAAGTCAATCCGTAAA TTTGGTCTGCCTCTCTTTATGATATCTAACTGTGCAGCAATTCTGAGTAA ATATAAAAACACATCAACGCACACAACTGTTGTAAATATTAGCCATCGGA CTTATGAAGTTGTTGATGGCGAGGAGATGTTCACAATCCACCTTGGTAAC CAGAGAGAATTCCCATCTTGCACATGCGCAGTATGGAAAACGTATTCTAT ACCTTGTAAACACATTTTCCGTGTCTTGAAGAAATATTCACTGGATTATG ACTCTTTGAGCCCTATTTACAGGGCTAGCCCGTATTTCGATATTGATTTT TCATGTATGGAAAAGGTGAACAAAGATACGGCGAGATCGATGATCACATT CATTCCATCTAAAGAGGATATTTTGAAAAGCATAAGAAACCTTTGAATAT TTTTTATCTTTCCCTTTTTTAACGTTTAGATATTTTTGAGGATTTCTTAG TGTACAACATTTTTTACCCTTTTTTGAATTTAGTTACCGTTTTTTAGATT TTTAAAAATATTTTTCATATTTTTTGAAACTATTTTTCATATTTTTCAAA CTATTTTTCATATTTGTTGAGTTTCGCAGTTTTGTTTTGATTTTCATTTC ATTCCATCCTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001501TCONS_00001501Clytia hemisphaericatranscript
TCONS_00001500TCONS_00001500Clytia hemisphaericatranscript
TCONS_00001499TCONS_00001499Clytia hemisphaericatranscript
TCONS_00001498TCONS_00001498Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001499-proteinTCONS_00001499-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:801784..810745 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.13 1.93 3.08 3.25 4.82 3.74 3.76 3.92 1.85 1.78 0.97 1.34 0.86 0.78 1.53 2.37 1.41 2.57 0.82 0.51 1.43 1.57 3.67 3.22 2.18 2.6 0.48 0.35 2.39 1.83