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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001501 ID=TCONS_00001501|Name=TCONS_00001501|organism=Clytia hemisphaerica|type=transcript|length=2027bp
TCTAGATGAAGTAAATTAATATGTATGAAATAGAATGTAAGAAAAGGTGA
GGAAAGCGAAAGTAAAAATGGCGAATAACAATAATACAAGCAAACCAAAA
GGACTTTACTATGAAGATGAGCGGATTGTTGTCAACGCCCATGGAATGAG
GGCTGGCTTAATGTTTCCTGACTGCTATGTTGTAATAGATGATTGTAGAG
ATGGTGATGCGGTCCCACAAGATGTAGAAATGAAATCAGAACTTGATGTG
AAAGTTCAATCGGATCCAGAGGACCTACACAGTCAATCAAACTTCTCAAA
TTTGAGTATTCACAATGGTTTGTCTATTGATGACTGTGGATTACTATCTA
GTGAAAACGAGGACGTCAAATTAGAAATAATAGACGAAGACCCTCAAATG
CCGGTCACACCCATTTCAACGACAGTAAAACTAGAAAATGTTGAGCTTTT
ATTACCACTTGAAGCGGTTTTGACAATAAAAATGGAAACTAATCAACATG
ATACTAATCACATCGCTCTAATTAATGTTGAAATGAATTCAGAAAGTTTT
GTACCGGAAAACCGAGAAAGCGTGGTAGATGAGAATAACAATGGCATTGA
TTTGAATAATCTTGTTCATAAAAACACTCATCACACTTCTGCTGAAATTA
ATGCTGTCCATACAGTAATTCATGAAGACGAATCTATTGATGAAAGTGAA
GATCATTGTCGAATGCATACAGAGCCTAAAACACCtggtaaaaattgcaa
aatcaatAATTGTGATAAAACTGATGGAGTTACTGAAAATGGGGACATTT
CCAATGAGGctgaaattgatgatgatgatgatttgaGAGCTTTCATTGAT
GTGGACACATTTGTTTTAGCAAACGAATGTCGTGTAGAGTTAAATGATTG
TCTGCGTAATGAAAAGGACAAGACTGTTGAAAATGGTAGTGATAATTCAA
TTTGTGTCGATAAAAACGAAGAAAATATGGAAAGTTTCGTTGAGGACGAA
AACGATGAAAATTTACTATCGAACCGAACCATATCCAGgattaaaaaaca
ttttacacATTTAGAAAAAGGAGGAGATGAAATTTCTTTTCggattgttt
tgaaatcaaactcgagattttattacaaaacttgTGGCATTCAAAAAATC
CATGAAAATCCACATCAATTGGATGAAATAATGTTTTTCGAAGAAACATC
ATCGCAACCGAATATTCGTTTAATCACAGAATTATACGCCCTAACGCAAA
ATCAATCACAACAATATCTCATAAACAAATACCCAACAATATTATTCATT
TCGCAGATTCAAACCGTAGATTGCATATTCTCATTATTTCTACTGTACGT
TCGAACGAATGTTGATTGCCAAATAGTTGGTACAATACTCTGCAATAACA
ACAACAATCAAGCGAAAGTGTTGAAAGAAGCGTTGACCGAATTCAAAAAG
ATCAACAGTTTTTGGACACCCAAATATGTAGTGATTGATCCAAACCAAGT
CATCCTTAACACTGCTGAAGAAGTATTTCCAGacTCAGAACTATTCTTTG
ATCCCGAAATGTGTGTTTACAATTGGGAAAAGCATCTCTCAAATCCATTG
AATGGTCTAAGAGAGCATTCAGAGCAGTTATTTCATGACTTGAAAGCACT
TCAAATGTGTTCAAAGAAAGGTCAATATCATGATTTGGTTCAAGAAATGA
GGGATAAGAATATTTGTAATGATAGAAGCTTTCGAGAAGAATGGCTTATG
AATGCGAAGGTAAGCTCATCCAAACTaacagatatatttttcaactcgAT
TCGCTTATAGTGGTTCTCAAGATTTCTAATGCAATTTTTGCATCTTTTGG
TTTTTTGCGACCCTGACATAAAGCATTACTACTAAAAAATATAACCCCGA
AAAGCTAGAACAGAATCTCCTTGATTTGAAGCCATTTCCTGAACGGTCTT
TTACACGAACACTAGTGGGTTAGTAAACAGTAGCGTGATGGGTCGACCAA
AATTTGAGCAAACTGGGGTATTGGTAA Run BLAST on NCBI transcript from alignment at sc0000010:803649..810745- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001501 ID=TCONS_00001501|Name=TCONS_00001501|organism=Clytia hemisphaerica|type=transcript|length=7097bp|location=Sequence derived from alignment at sc0000010:803649..810745- (Clytia hemisphaerica)
TCTAGATGAAGTAAATTAATATGTATGAAATAGAATGTAAGAAAAGGTGA
GGAAAGCGAAAGTAAAAATGGCGAATAACAATAATACAAGCAAACCAAAA
GGACTTTACTATGAAGATGAGCGGATTGTTGTCAACGCCCATGGAATGAG
GGCTGGCTTAATGTTTCCTGACTGCTATGTTGTAATAGATGATTGTAGAG
ATGGTGATGCGGTCCCACAAGATGTAGAAATGAAATCAGAACTTGATGTG
AAAGTTCAATCGGATCCAGAGGACCTACACAGTCAATCAAACTTCTCAAA
TTTGAGTATTCACAATGGTTTGTCTATTGATGACTGTGGATTACTATCTA
GTGAAAACGAGGACGTCAAATTAGAAATAATAGACGAAGACCCTCAAATG
CCGGTCACACCCATTTCAACGACAGTAAAACTAGAAAATGTTGAGCTTTT
ATTACCACTTGAAGCGGTTTTGACAATAAAAATGGAAACTAATCAACATG
ATACTAATCACATCGCTCTAATTAATGTTGAAATGAATTCAGAAAGTTTT
GTACCGGAAAACCGAGAAAGCGTGGTAGATGAGAATAACAATGGCATTGA
TTTGAATAATCTTGTTCATAAAAACACTCATCACACTTCTGCTGAAATTA
ATGCTGTCCATACAGTAATTCATGAAGACGAATCTATTGATGAAAGTGAA
GATCATTGTCGAATGCATACAGAGCCTAAAACACCTGGTAAAAATTGCAA
AATCAATAATTGTGATAAAACTGATGGAGTTACTGAAAATGGGGACATTT
CCAATGAGGCTGAAATTGATGATGATGATGATTTGAGAGCTTTCATTGAT
GTGGACACATTTGTTTTAGCAAACGAATGTCGTGTAGAGTTAAATGATTG
TCTGCGTAATGAAAAGGACAAGACTGTTGAAAATGGTAGTGATAATTCAA
TTTGTGTCGATAAAAACGAAGAAAATATGGAAAGTTTCGTTGAGGACGAA
AACGATGAAAATTTACTATCGAACCGAACCATATCCAGGATTAAAAAACA
TTTTACACATTTAGAAAAAGGAGGAGATGAAATTTCTTTTCGGATTGTTT
TGAAATCAAACTCGAGATTTTATTACAAAACTTGTGGCATTCAAAAAATC
CATGAAAATCCACATCAATTGGATGAAATAATGTTTTTCGAAGAAACATC
ATCGCAACCGAATATTCGTTTAATCACAGAATTATACGCCCTAACGCAAA
ATCAATCACAACAATATCTCATAAACAAATACCCAACAATATTATTCATT
TCGCAGATTCAAACCGTAGATTGCATATTCTCATTATTTCTACTGTACGT
TCGAACGAATGTTGATTGCCAAATAGTTGGTACAATACTCTGCAATAACA
ACAACAATCAAGCGAAAGTGTTGAAAGAAGCGTTGACCGAATTCAAAAAG
ATCAACAGTTTTTGGACACCCAAATATGTAGTGATTGATCCAAACCAAGT
CATCCTTAACACTGCTGAAGAAGTATTTCCAGGTACAAGAATTGTTTTAA
TCCATTTTATAATGAATTTGTTTGCTTAACCCTTTCGGGAAAAGTTCTTT
AGCCGTACAAACCTTCGCGAGCAGAAACTTCCGCGAATNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCA
ACGACAGTAAAACTAGAAAATGTTGAGCTTTTATTACCACTTGAAGCGGT
TTTGACAATAAAAATGGAAACTAATCAACATGATACTAATCACATCGCTC
TAATTAATGTTGAAATGAATTCAGAAAGTTTTGTACCGGAAAACCGAGAA
AGCGTGGTAGATGAGAATAACAATGGCATTGATTTGAATAATCTTGTTCA
TAAAAACACTCATCACACTTCTGCTGAAATTGATACTGTCCATACAGTAA
TTCATGAAGACGAATCTGTTAATGAAAGTGAAGATGATTGTATGCATACA
GAGCCTAAAACACCTGGTAAAAATTGCAAAATCAATAATTGTGATAAAAC
TGATGGAGTTACTGAAAATGGGGACATTTCCAATGAGGCTGAAATTGATG
ATGATGATGATGATTTGAGAGCTTTCATTGATGTGGACACATTTGTTTTA
GCAAACGAATGTCGTGTAGAGTTAAATGATTGTCTGCGTAATGAAAAGGA
CAAGACTGTTGATAATGGTAGTGATAATTCAATTTGTGTCGATAAAAACG
AAGAAAATATGGAAAGTTTCGTTGAGGACGAAAACGATGAAAATTTACTA
TCGAACCGAACCATATCCAGGATTAAAAAACATTTTACACATTTAGAAAA
AGGAGGAGATGAAATTTCTTTTCGGATTGTTTTGAAATCAAACTCGAGAT
TTTATTACAAAACTTGTGGCATTCAAAAAATCCATGAAAATCCACATCAA
TTGGATGAAATAATGTTTTTCGAAGAAACATCATCGCAACCGAATATTCG
TTTAATCACAGAATTATACGCCCTAACGCAAAATCAATCACAACAATATC
TCATAAACAAATACCCAACAATATTATTCATTTCGCAGATTCAAACCGTA
GATTGCATATTCTCATTATTTCTACTGTACGTTCGAACGAATGTTGATTG
CCAAATAGTTGGTACAATACTCTGCAATAACAACAACAATCAAGCGAAAG
TGTTGAAAGAAGCGTTGACCGAATTCAAAAAGATCAACAGTTTTTGGACA
CCCAAATATGTAGTGATTGATCCAAACCAAGTCATCCTTAACACTGCTGA
AGAAGTATTTCCAGGTACAAGAATTGTTTTAATCCATTTTATAATGAATT
TGTTTGCTTAACCCTTTCGGGAAAAGTTCTTTAGCCGTACAAACCTTCGC
GAGCAGAAACTTCCGCGAATTTTGCGAATTTTGGCCCTTTTCGCGGAAGT
AAATGTCTTTAGAAAGACTAATAAGTCAAAGGACAAATGTTTCAAGCCAA
TCCAAGAAGTATTTGTATTAAGTATTAAGCCATTTTTTCGTGTTTAAGTT
CCNTTGTGAGTGATTTCTGACTGGGTGACAATGTTCGGGCATAGCTTGCA
TTTACCACACGGTTTCGTGGTGTTTTGACGTGGTGGTCTTTCCAATATAT
CATTTCGCACGATTTTGTTGGCGATTGTTTTTCGGTNGAATAAAAACATA
CTGGTGTAAAATATTTCGCTCTCTCTTAGAGCATCTTCAGTTTTTTTGAA
TAACAAAGACGTTTAACAATTATATTTAACGACGCTAGAACGGCATTAGA
ATGACTTCTTCAGTTTTTGACGTCACGGAACATCTGGTACACTTCTTTCG
CGTACCCGTGGCAGTCTTTGTTGAGACCTGATGGAGCCAGAGTTTGGAGT
CTGCACATCCATTTATCTTCGGCTCGTTCTCTTTCTGCAGAGGATGAAAA
GTCACTTTCTAGGATCATCACCTCAAGGTCAGCAAANTTGGAAAGAGACC
GAAAAATTCAGAGTTGGCAGAACATTTCCATCGCGACCACTCCTTTGCTG
ACCTTGAGGTGATGATCCTAGAAAGTGACTTTTCATCCTCTGCAGAAAGA
GAACGAGCCGAAGATAAATGGATGTGCAGACTCCAAACTCTGGCACCATC
AGGTCTCAACAAAGACTGCCACGGGTACGCGAAAGAAGTGTACCAGATGT
TCCGTGACGTCAAAAACTGAAGAAGTCATTGTAATGCCGTTCTAGCGTCG
TTAAATATAATTGTTAAACGTCTTTGTTATTCAAAAAAACTGAAGATGCT
CTAAAGGCCGGTCTCGACTTGCGCGCGCTGCAATCGCACTTTTTGGCTTC
AATCCCTTTTGCTTGGAAAAAAGATTACGTCATAAAAATGTAGCGCGCGC
ACGAAAAAAAAGTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGCCAATGGAGTTGC
TTCATTTTTCTTTTGACCAATAGCGTGGAAGCTTTTCTCGAAAAGTGCGA
TTGAAGCGCGCGCAAGTGGAGACCGGCCTTAAGAGAGAGCGAAATATTTT
ACACCAGTATGTTTTTATTCTGAGTTTTACTTCGTCCGCAATGCTGAATT
GAAAGTTTATGCTCGCGAAAAAAGTATTCTGACAACAGACAAGCAGACCT
CAAAATTACAATATTAAATAAGGGTTCTTTTTTGCAATGCTCCTACACAA
AATGTCCTAGGGGGGTCAGTATGACAACGTTTTAGTGGCGCTCATCTTTT
TCAGAATTTTTCGTTATTGAAAAAACCTCCCAAAAATTCCCTAGTCTTTT
TTTTCTTCGCGCTATTCTCAACTTCAGTTCTCAACTTCAGTTGAGCTAGA
ATCTGAGAATGTCTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGT
CTGTCACCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCTA
AAACTTTGGGGCAGGCTGGAGACTTCAAAAATGGTCCGATTGGGCTGAAA
TTTTGCACACTTGATCCTTGGGCAAATCCCTGGGGGTTTTTTTTTCATTT
TTTGAAAATTTTCATTTTTAAGGGCGTTGTCACGAGTTTTCGCCAAAACG
AGGCTAAAACTTTGGGGCAGGCTGGAGACTTCAAAAATGATCGGGTTTGG
CTGAAATTTGAAACACTTGTTCCTTGGGTGAATATCTGGGGGTATTTTTT
TTATTTTTTGAAAATTTTCATTTTTAAGGGCGTGGTCACGAGTTTTCGCC
AAAACGAGGCTAAAACTTTGGGGCAGGCTGGAGACTTCAAAAAAGGTCGG
ATTTGACTGAAATTTGGCACACTTGTTCCTTGGGTGAATATCTGGAGGTG
TTTTTTTTATTTTTTGAAAATTTTGATTTTTGGGGCCTGGGGACGAGGTT
TTCACCAAAACGAGGCTGGCAGCCTGGACACTTCAAAAAAGGTCGGATTT
GGCTGAAATTTGGCACACTTGTTCCTTGGGTGAATATCTGGAGGTGTTTT
TTTTACTTTTTGAAAATTTTGATTTTTGGGGCCCGGGGACGAGGTTTTCA
CCAAAACGAGGCTGGCAGCCTGGACACTTCAGAAAAGGTCGGATTTGGCT
GAAATTTGGCACCCTTGTTCCTTGGGTGAATATCTGGAGGTGTTTTTTTT
ACTTTTTGAAAATTTTGATTTTTGGGGCCCGGGGACGAGGTTTTCACCAA
AACGAGGCTGGCAGCCTGGACACTTCAGAAAAGGTCGGATTTGGCTGAAA
TTTGGCACCCTTGTTCCTTGGGTGAATATCTGGAGGTGTTTTTTTTACTT
TTTGAAAATTTTGATTTTTGGGGCCTGGGGACGAGGTTCAGCCAAAACGG
ACAAAGAATATTTGCTACCTAATACTAAATATTTGAAATGTTACAATTGG
GCCTTCTAATAACGGGAAAATCTGAAGTTGAGCCCAGTGCGGTGCGCACG
TTCGACTATCAAAAAAAGATCTAAAATATTTACCGAATTCGAAAAGTAAT
CACCTTAAAATAAAGAATAACTGAAATGCTAATGCTGTAATGCTTCATGT
ATTATTTTAATCGGATTAAATTTCGCGAGATTAGATTAAATTTTGCGAGC
GAAAAAAATCGCGAAATTTTCTGCATTTAATTTCGCGAGTCAGGAATCTC
ACACGTTTTCGCGAGTTTTGATTTCGCGAAAATGGCAAAAATTTATCATA
TTTTCGACTGATATTCGTCGTCAATTTATTTTATAATTACTTTTATTTTC
AGACTCAGAACTATTCTTTGATCCCGAAATGTGTGTTTACAATTGGGAAA
AGCATCTCTCAAATCCATTGAATGGTCTAAGAGAGCATTCAGAGCAGTTA
TTTCATGACTTGAAAGCACTTCAAATGTGTTCAAAGAAAGGTCAATATCA
TGATTTGGTTCAAGAAATGAGGGATAAGAATATTTGTAATGATAGAAGCT
TTCGAGAAGAATGGCTTATGAATGCGAAGGTAAGCTCATCCAAACTAACA
GATATATTTTTCAACTCGATTCGCTTATAGTGGTTCTCAAGATTTCTAAT
GCAATTTTTGCATCTTTTGGTTTTTTGCGACCCTGACATAAAGCATTACT
ACTAAAAAATATAACCCCGAAAAGCTAGAACAGAATCTCCTTGATTTGAA
GCCATTTCCTGAACGGTCTTTTACACGAACACTAGTGGGTTAGTAAACAG
TAGCGTGATGGGTCGACCAAAATTTGAGCAAACTGGGGTATTGGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001501-exon-sc0000010-1575043694:809214..810745 | TCONS_00001501-exon-sc0000010-1575043694:809214..810745 | Clytia hemisphaerica | exon |
| TCONS_00001501-exon-sc0000010-1575043694:803649..804143 | TCONS_00001501-exon-sc0000010-1575043694:803649..804143 | Clytia hemisphaerica | exon |
| TCONS_00001501-exon-sc0000010-1510915933:809214..810745 | TCONS_00001501-exon-sc0000010-1510915933:809214..810745 | Clytia hemisphaerica | exon |
| TCONS_00001501-exon-sc0000010-1510915933:803649..804143 | TCONS_00001501-exon-sc0000010-1510915933:803649..804143 | Clytia hemisphaerica | exon |
| TCONS_00001501-exon-sc0000010-1491911889:809214..810745 | TCONS_00001501-exon-sc0000010-1491911889:809214..810745 | Clytia hemisphaerica | exon |
| TCONS_00001501-exon-sc0000010-1491911889:803649..804143 | TCONS_00001501-exon-sc0000010-1491911889:803649..804143 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000010 | supercontig | sc0000010:803649..810745 - |
Blast
The following BLAST results are available for this feature:
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