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XLOC_000729 (gene) - C. hemisphaerica

Overview
NameXLOC_000729
Unique NameXLOC_000729
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000010:596005..604106+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000729 ID=XLOC_000729|Name=XLOC_000729|organism=Clytia hemisphaerica|type=gene|length=8102bp|location=Sequence derived from alignment at sc0000010:596005..604106+ (Clytia hemisphaerica)
GGTGATTCAAACAGGGATTTCATTTGtgtatcttataaaaaacatgccGA TGTTGTCCCTTTCCCatactttatataaaaagtgATATGCACAATCAGTT TCTTGAAAACTATGAGCTCAGATTTCAGAATTTCGCTTTTTAAACGAGGG AGACAATTTAAAACTTGCATCATTCAACGAAAACGGCAAATAAGTTTTCA AGAGAAACTGTTGTTAGAAGCTGAGCTGTATAACCAAGTTGAACTATGCC TCAAAGAAGGACTGCTGTCTTCCCCGTAAACGGTCAAGGGACTCTAGTCT ATACCGTTCGTAAAAAGAGTCAATTCACCATCTACATAACACCTGACAAA CAAAAGGTACCAAAAAGCTTGGATTTTGATAGTGAATTCTCAGAGTTTGA AGAGGAGCAAAGTTTTGATACGGAGAACTACATCTCGTTGACTGTTGGTG AGAATTTTGCACGTTTCAAACTGAAGATGCATAAAGATGATGAAGAGAGA GTGTTGAAAGAAGAATATGGGAAAAATATTGGAATTGAACCTAAAGAACT GGTAAGCTGTACCAATCACATCGTTTTTTCTCGTACTTTTATTAACTTTT AACTAATTCAATTTGTAATTCCGTTGCGAAATATTCTTTTAAATTACAAG TCTGTATGTAACATAGTTTTTGGATACCCTACTTTCTAAGATTCCAGCAA CGAACATCCCTTTCGAttgtaaaattttcatttttatcaaccCTGATGGA CCTTTTTGGACCTCTCCAAGGAGACCTAAAAGTAGCCATTATAGAGTACA AACTTTACGATTTGTCTAAGCCATATAAGTACACCTGCCAATAATGCTGG GTCATTCATTCTGACTGACTTTTAAAATTACTGATTCAGGGCTGACTCTT TTTCCCAGAGCTATTATGTTGGATCAAATTTATACTTCAgttactttttt ttctttcttacaagTATTGCTTAAAAGCAATCGATTTTCTTTACAATCAG ATCTCATTTTTGGTTGCAGGTCACTTATTGGTTTAGTTACGACCGCGATG CACTGACCTTGAAATACGGCAAAGGGCACGTTATGACTCAAACAACACTG TTAGAATTCCCTTTCTTGGAAGGCAAATCGAAAGGCGAAGAAGAACACAT CCGAAAGAAGTACAATATTTTCTTCAACGCAGGTTAGATTTCGAACTCAC CAATAATATTATCAATCAACTTTTGTCTACTTtgttaaaaagtttatttt aagTCTGTCCGTCTGTCTACCTGTATGTCTGTATGCCCGAGAAAaccttt gactttttttttacaaatcgACACTGAGTTCGAAttattgattttgtatt ttaatttttcttgaaGAGAGAAAATACGTGGTTACCGAATCAGAGAAAAT AATGGAGGACGTGACAGGAGGACTGGTCAAAATCGAACAGACGTTACAAT TCTATTCCAACCCTCTCGTGACTAATTTCTCACCTATCGTTAAAGATAGT TCGAAAGTCACTTTGCTTGATCTTGATCGAGATCAATTCATGTTTTCCAG TAGTCTACCACCTGCCTGTAAAGAACTCTACGATAATATTAAAGGTATAT CTAGTTGACTTCCAATGTCTAATTTTTTGTGGTCTTTAGTTTCCTAATAA ATAATACCATACCAGAACCCATAGTATAATTAATGTATATCGTGCTGCTC ATGCTCTGTCTTTATCAAACTGCAATCACCGCATGTCAAATCTTGTTGTC GAATATGTCGTTTGCTCTTCTCTCGTTTTAAAGGCCagagtaagtaagta agtctaaGACCGCAGTCAGAAGTCTGAAGGCTTCTTTCGACAGCTATTAC CCAAAGGTAAAAAGGGTGGGCGCCAATTTTTACTCCCTGGACTGCTGCAC Ttatccttgatccttctcttaattgctgagcatcaaacaaagaagcatca agtaccattttgggaatctttggtattaCCCGCTTGGGGTGGAACCCACA ACCtagcgaaccgtagccggaagctctaccactgcactacggtcgctgaa GGCCATAGgtataaatactttttggaaattaGAAATCATTGTCTTCTGCA GGTCTCCAACTGGAGTTTCCAGAAGATCCTATTACGAAACTTTCAGACGC CATACGGTACAGCATCAACACACCTGGAATGACTTTAtacgaaaagttga aagaaaaggaagaacAGTTTGCTTACCTACGTGTAACACTCGGTCCTGAC CGCCGNAGCCGGaagctctaccactgcactacggtcgctgaaGGCCATAG gtataaatactttttggaaatttgaaatcatTATCGTCTACCGCGCCTGG TATTCCCTATGTTCTAGAGATCTGGCCTTCAGGTAAGGAGATGGTTCAGT GCAGCTCGCTTTGGCAAGTTAACCGTAGTGGTAGTAACATGTTTTCAATA TTTAAGAGGGAGATCATGAATCGCATTACTCGTTGATGTGTCTTGATGTA TACCGGATGGTCCAAAGAAAGTTTccataaattcaaaatttatgattttc atCACAAAGTGTTAGAACAACTATCCACCGCACAAACAGATAGGGTTGAT TCTACCAGCGTCGATGAAtatcaatttctgaaaattttccgATAGAGTGA CTTCAGACATCGGTGGTCTCTCGCCCCTGGGAAACTATAACTATACTATA AAAGTAACTTAATTCNACTTTTTCAGATTATACGCTCAtatgttttcttc ttttatattaCTAACTGCGAAATAAATTAGCATGGTCAGGGGATTGTCCA GGGTTGATGAATCTATATTTGCTTTCTTTCTCAGGAAAAGGAAGCCCTAT CCATAATCATGGAGGAGCATGCGCTATCATTAAAGTGCTATTTGGTAGAA TCACTTGCAACATCTACAACAAGATCACACAGCCACCAGAACAAACAGAA ATGCAACCTTTGACCAGATTTGATCTCAATGAAGAGCAAATGACCTGGAT AGGCCCCAACTGGTATCAAACGCATCGCTTACACAATAACACTGATGATT TCTGCGCAACCATACAATGCTATCGATATGACTTCAATGATGCAATTCGC TGCCCAAATTTCCATTATGTGGGTTTTGTAGAAGGCAAAGAAAAATATGA GTTGGAAGAATTCTATCCAGATAGCGATTTCACGTTCGTTAATTTGAGAC GAACTGTTCTTGACGAGTATCAAAAATTCTTGGAAGGCTGAGTagtgatt ttgattttattttttttctgtaaaagtgttgtttttaatcaaattttatt taGCCCTCTTAGCCGAGGGTAATCTAAAAGATATTTTAGAGCTTCTACag tttaaccctatttttatcagtgGGGGTGTTTTCCATCAGCCTGGCATTTA TTTGCTAATAGCTTTGTATTTGTCTGATACTTTCGTACACAAGTCGTTTC TTTTGTCAGTAATGAGTTGTGGTAGCGAACCCCAAATGAACTTTCTGGTG CGAACCCTGAAACAAGATTTTGACAAGATAGTCTACCTGCAGGCTTTTAT TGGCACGGCCAGTAAAAGAGTCGCGGTATTTCAGCACGGTAAAATAAAAA GACGCAATTGTTAAAGAGTTAACGACTTAAAAGTATCAAAGAGTTGGACA ATAAAAGGCTAtttcatatttaaaaaaaaatcaaatttgtttaaTACCGA TTTAGTTGTATGAAAAGAGATTCTCGAAAAACATTATCAGTGATTCGACA AAACATACTTTCACCGAAGTTTCTTTTAAGATAATCCTATAGAGTCTGTG TAAAACATGATAAGGCAAGTGGGTAAAACGATATGAACCTTTTGTCGGGA GATGATGATTCGTATGACAATCTCGTAATTAGGAACTTATAGTATTTTTA TAGACTTAAAAAAGCTTTGTTAGTTCTATGTTGTTTTAATGATCTTTGAT GTTTAGTAAattcaaacaaacaaacgaAAATACTAGTAAGGAAATAATTC TCGTTCCAACACaatcttacacgtttttttataagaacaaactatataag aacataaggcttcgatgaccaaaatgttaagaataagttaagaacatttt aaggcttcgcggactcaaAAACAGCCAATtacttaggaaaatggacaaaa atacataaaaattgggggaaaataagaacatgttaaggacattttgaaac tcaaaaagttaagaacatctgaaggcttcaaaaaatttggatgttcttat aaaaaaacgtgtatctgtttgaaagaaaattagtttaCTGGTAATAGACA AGCTCCTCTTCTTTCCTAGAAAGGTGTTTTACATTCTGcgaaaaaaaaaa cctaaaaGTTTTTGCTGACTCAAACAGTGATTTGAATCTGTGACTATCTT GTGACTATCAGCCTCTTTCCAATCCTTTATATAAAGCCGCCATAATGTGT ACgaatcttcaaaactactttactTGTAAACCGCGAGGGAGACAATTTAA AACGTGCATCATTCAACGAAAACGGCAACTAAGTTTTCAAGAGAAACTGT TGTTAGAAGCTGAGCTGTTTAAACCAAGGTGAGCTATGCCTCGAAGAAGG ACTGCTGTCTTTCCCGTAAACGGTCAAGGGACTCTAGTCTATACCGTTCG TAAGAAGAGTCAATTCACCATCTACATAACACCTGACAAACAAAAGGTAC CAAAAAGCTTAGATTTCGATAGTGAATTCTCAGAGTTTGAAGAGGAGCAA AGTTTTGATACGGAGAACTACATCTCGTTGACTGTTGGTGAGAATTTTGC ACGTTTCAAACTGAAGATGCATAAAGATGGTGAAGAGAGAGTGTTGAAAG AAGAATATGGGAAGAATATTGGAATTGAACCCAAAGAACTGGTAAGCTGT ACTAATCACATCGTCTTATCTTTCGTCTAGACTTTCTCAGTCTGGTTACG TTACGTAGTTGTACTTCTATTGTTTTTACAGCTATATATCCTGTCCTATA CGTAGCGTTCTTAAAGCTCGTGATTTTTCTTTAACGTTGGAATTTGTTTT TGGTTTTAGGTCAGTTATTGGTTCAGTTATGACCGCGATGCACTGACCTT GAAATACGGCAAAGGGCACGTTATGACTCAAACAACACTATTAGAGTTCC CTTTCTTGGAAGGCAAATCGAAAGGCGAAGAAGAGCACATTCGAAAGAAG TACAATATTTTCTTCAATGCAGGTTAGACTTTGAAGTCGCTAATATTCTC AATcgacttttgttttttttccctTGGTTATCAACTTCAACTAAGTTTGG GTATaaatctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtct gtctgtctgtctgtctgtctgtcttaCAATATTGTCACCGGATTTGTCGT TTTATTGGATTTCTCTCATATAATGTGTATGTCGGATGGAAATGGTTATT TAGGTGTGTGACATTGGGTTGATGGATGTTTACTAATTGGCAGTTTTTAC ACTAGGCTTGGATAGTGTTagttttttcttttggaaaggtgGGTTTTGGC TTTTATCAACAGTTCTGTATTGTTTTCTTCGTGTCTCTCTGTCTGTCTGT CCGTCCGAAGATTTATGGGTTGACCAATTTTCTTACCATTTGAGGCTAGG TTCGAATTattaattttatatttatttttctagaAGAGAAAAAATACGTG GTTGCCGAATCGGAGAAAATGGTGGAGGACGTGACAGGAGGACTGGTCAA AATCGAACAGACGTTACAATTCTATCCCAACCCTCTCGTGACTAATTTCT CACCTATCGTTAAAGATAGCTCGAAAGTCACTTTGTTCGATCTTGATCGA GATCAATTCATGTTTTCAAGTAGCCTACCACCTGCCTGTAAAGAACTCTA CGATAATATCAAAGGTACGTCTAGTTAATTTCATAACAGATCATCTATTC TGCTCCTAAAGGGATTTGGCAAATGTGCCGATCTAACTTGGTTGTCTGTC AAAACAATTAAAACTACGTTGCTTTTTGGTTTTAATGATTATAAGATTGA CATATGATTTTGGTGTGATTGCTTTGCTTTAGCCAATAACTGCGCACAAA ATCTCATTCCGCAAACATGAGCAAATTATTTTATGGAACCATGCCCTTTA GAGTGAATACTTGCCATGCCATGCGTTGAGTAGTAGAATCTGCTCAGAGA CTAATGTCTAGTTGACCTCTAATTTCTAACGTATTTTGATGGTCTAAAAT AGACGTTACTGCTTAGAAAAATAGCCTTGACGTTTTAAATATAGGCAAGT TATTCATCAGTAGTCATTATCATCTGCNGTTGATCTCtaatttctaatat ttttttggtTCATGGTCTAGAATAGACGTTACTACTTAAAAAATCATTAT CGTCTACAGGTCTTCAACTGGAGTTTCCAGAAGATCCTATTACGAAACTT TCAGACGCCATACGGTACAGCATCAACACACCTGGAATGACTTTAtatga aaagttgaaagaaaaggaagaacAGTTTGCTTACCTACGTGTAACACTTG GGCCTGACCGCCGTACCGCACCTGGTATTCCCTATGTTCTAGAGATCTGG CCTTCAGGTAAGGAGATTTGATTATGTCCGGCATTGACTAGTTTACTGTa gtattaccttaagggaattaattttcgcgggacttattttcACGACTAAC TTCGACTgtaaattttcgcgaggatttaatttcgcgaattgacgaatttt ttcagattttcagatttttccttAGTTTGATTACGAGATTTTGTGTGTTT AGTAGAGTCTTATATCTTCATAactgaataaaaatttattcgaattacag agacatTCGAGAGTCATTTAAGAGAGTTTCCATTAGATCAAAAAACTTAG AATTTTTAgcgtaaaaaaattaattttcgagaggatcaaattttgcgaat ttagCGAGAGAtgagagtttgaaaattttcgcgagagattatatttcgcg aaaaagttgaaattcgcgaaaattcgcgaaatataatccccgcgaaaatt tattcccttaaggtaccatgtttgtaatttttgatagaAAGATCGGGGAC CGCCATAGAGCTTGGTGTATGTGGTTTATACTATGATTTTCATTACATGG TATAATTATTTTGATGTATCCCTCTAACAACCCTAACTCCACAATGGGAT TTGGTTTAGGCCTACCAGGGTCCAATGTCTGTCTTTGTGAGCACGTTAAA TGTACTATGTACCAGTGTATCTCTCGCAGTACCTCTAcggcaataaattt tgaaattagccgtagatatcgggtctgtaTTTAGACTAATGTTAACGCAA TTACACCAGACATTACAAGTCAATTCTGCCATGCACTTTTTCAAATTATA CGCTCAtatgttttcttcttttatattaCTAATTGCGAAATTAGCATGAT CAGGGAATTGTCCAGGGTTGATGAATCTATATTTTCTTTCTCAGGAAAAG GAAGCCCTATCCATAATCATGGAGGAGCATGTGCAATAATTAAAGTGCTA TTTGGTAGAATCACTTGCAACATCTACAACAAGATCACACAGCCACCGGA ACAAACAGAAATGCAACCTTTGACCAGATTTGATCTCAATGAAGAGCAAA TGACCTGGATAGGCCCCAACTGGTATCAAACGCATCGCTTACACAACAAC ACTGATGATTTCTGCGCAACCATACAATGCTATCGATATGACTTCAATGA TGCAATTCACTGGCCCAATTTCGATTATGTGGGTTTTGTAGAAGACAAAG AAAAATACGAGTTGGAAGAATTCTATCCAGATAGCGATTTCACGTTCGTT AATTTGAGACGAACTGTTCTTGACGAGtttcaaaaattcttagaaGGATG AGTTATGATTTTAACTTTCCTGCAAAGATTGCAGTGCTTTcaagtaaata aatattttgttagCGTTTTTTTTTCACAGTAAACAGTAAACCATGTTACA TTTTAAAACGTTATACTGTTGAACCCCCATGTAATTTGTATTTAATAAAT TGAAAGACCTATGTGTGAATCGAAAAAAAACTTGATAATTTCacaattaa aa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001357TCONS_00001357Clytia hemisphaericatranscript
TCONS_00001358TCONS_00001358Clytia hemisphaericatranscript
TCONS_00001359TCONS_00001359Clytia hemisphaericatranscript
TCONS_00001360TCONS_00001360Clytia hemisphaericatranscript
TCONS_00001361TCONS_00001361Clytia hemisphaericatranscript
TCONS_00001362TCONS_00001362Clytia hemisphaericatranscript
TCONS_00001363TCONS_00001363Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001357-proteinTCONS_00001357-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:596005..604106 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.67 3.55 4.65 4.32 3.25 1.93 2.87 3.14 40.4 88.02 15.85 12.36 14.48 10.94 59.9 7.06 152.18 118.98 208.41 257.78 13.47 13.61 66.49 105.2 261.97 630.63 195.74 359.03 625.55 340.37