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XLOC_000726 (gene) - C. hemisphaerica

Overview
NameXLOC_000726
Unique NameXLOC_000726
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000010:499806..508214+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000726 ID=XLOC_000726|Name=XLOC_000726|organism=Clytia hemisphaerica|type=gene|length=8409bp|location=Sequence derived from alignment at sc0000010:499806..508214+ (Clytia hemisphaerica)
ACTCTTGTTACAAGAGCCGACCGCAGAAGTCATTTGGCGCCATTCTTTTT TCGCTAATTTTGATTTGACAAAGAAATCTACCCTGGGTTTTCAAGATACT CGCAACCTGCCTTGTTCAAGTGTTGGGTGTTTCGTGTCAAAAAAAGCTTC GAAAATGGCGAACATTGAAGAGGCTGAAATCACCTTTCAACAACAAGAAC CTGCACAGAATGAACCCCCTGCAGATTTATCCAGCTTTCAATTTGTTCCT GAAAAAATTGTGGATTTTTCCATTCTACAGGTAAGCATTAAACTCTTGAt tgtttgtctttttttcttgttGTTCTTTTCGACTTTCAAATCTGGTGTGT GGCCATGGACCTATAAAGAGCGGTCAAATTATCTTTATTTCTGCTCATTC TAAAATGCTCAAAACTTTTTGTGTATGTGTGGTCATCTCTCTCATCCTTT NGCTTTTCGACTTTCAGATCTGGTGTGTGGCCATGGACCTATAAAGAGCG GTCAAATTATCTTTATTTCTCCTCATTCTAAAATGCTCAAAACTTTTTGT GTATGTGTGGTCATCTCTCTCATCCTTTTCTAGTACATTGATTTGTTTGC TGGACTTgaaatttaatgtttctatTATTAGGTTTAGAAGAGATTTGAGA tttcttctcatttttaaaAGCTTTCTCAATGGATCTATAACTCTTATATC TTAACTTCATTTTTTACAACATTTTATACCTAACTCAAGTTATCCTACCT GAAGTTCTTGCACATATAGCTATTTTCTCCTACAGGCTACGATCTCTCTT TCAATACCACCTTAAGttggtaccgtgagattgggtaaattgcatcagtg gaggctggTTAACATGCATAGAcgtcaaatgaaagacctgactggtcatt aaaatacaacctACAGTAGCAGCTCCGCTCCGCTCGCATctttactctac catttttgttttgatttaactttgtattacGCTCCTTTGTTTGTTtagcc actaatttggtctctTCGTTCAAGACATATTCGCTTGTGTTCCACtaagg attttttttcatatttcgatttgtAATATTCGGTTTGAAAGTGAaatctt gtattttttaatacgccgttcatcaTATCAAATGACTATGgaagttcggt gaaatggtggtcgaattgctgtcccatgttttgtcagatagtccctagtt agagcagttgatggtaataAACAAAAGATGAATGGATGGGTGTTAcaaca gtcactttcggtcggggtagAGGATGGCAacatttgtcgttctttatgaa atttgtcgttcttgtctatttttagtaaatgcaATGATTTTTTAAACCCG AATCGTGCAAAATTCTGCTTTCAtatatgaaaaatcaaatttgataaaaa attagtcaaaatgaggaaaaaataccccaaaaaattGTTATTGGAATTGG AAGTATTTTATTatggaattttcgaaattttggcaAACTTATTCGGTATT TTAGAAATTGCAAACCCTGTACGCCCCTATCTTAGAAGGGATTAAAAGAC AAAAGAGAATGTCTACagacatttttggacctaccccggtggggtggagg tcctataaattaacccgtgttcgttagttagttagttagttaccaacttt tctcgagattggctcattcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Natttttctttcaccgttaaacatcgatgcgtttcttaattgctttctcc gttccaatagatatataaatctaaatttaaaattatacattacttccatt aaattctaattattcgttttataaataggtaggtccattaaagtattact tgttaatttcacttttattatggaattttcgaaattttggcaAACTTATT CGGTATTTTAGAAATTGCAAACCCTGTACGCCCCTGTCTTAGAAGGGATT AAAAGACAAAAGAGAATGTCTACAGACATTTTTAATTTCACGTGAAATTG CCAAACACAAATATTTCTcaggattaaaaaaaatcacctcTAAAAATGGT CTCATTAGGGCAAAACAGgctatttttgtaaacaaaacattCTCTCAACC TGGAAATTAAACTTCCAAATTTTGAGCTGTTAAACtgcaaaaaatttctt cccttaagttaATGCGTACCATAAGTTGGtataatgtcaacatccctctt ctaatttcaacacccttctttagagatataAGGAATATTAAGAAGGTCGG GATCTCTAATAGACAAAAGTTTTTGTCCACTCTGATTGCcaaggaaagaa aaatagtttccatcagcgattctgaccttcctattattcctatctcaaag aagggtgtcaaaattagaagagggatgtcaacattaggcCAACTTACGAC AAAacatttcacttttttcaaattgcGGGTGAATAAGCTTTGACCattga ttttggtcaattttaggGTGCTGATTTGGAATTTAAGCTTGAAAACCTGC AGTTTTTgcataatttgatttttttttctaaataaaattgtaagctacct taaaggaagaaattttggcggaaagaaaattagGCGGATTTGGcaagaat ccgccaaattaagttcccgccaaaatttcttttttcccccatccgccaaa ttaaattcccgccaaatagCGCTCCGCGCAAcccatacgtcataattatt acttttcactttttttgacatttgtacgagttgcaatcccacaattcaac gtggctcaattaaagatacatgcaagctgttatatatcttttgtcaaacg atgcaattaacgtgcaaaagagattagcgcaaaggttgatgggattggaa ctcgtacaaacacatcgagagtaatgattatgtcaaaaataaaatctatt tttagattcagcgcggtgcgctattaaattttttgaaaatatgctcTTTT AAGgagtttttgcatttttttgtagCTGTTTTTACGTCAgtttaagaata aatttttcagcaaacgtcaaattaaattcccgccaaatttagttttttcg tccatccgccaaattaaattccctctaaaaaactttttcggccatcagcc aaattaaattcccgccaaaatttcttcctttaaggtaaaattcataattt tcagggtgttcttcaaaatcaaaaaagacctataccacgaGATAGAGCTC Ttccaaactgagcaaaaaatgtattatatcaaagtctcaacttttctaga tcaaaagttatgggtgtttttgtggtaaaaaaagtgctataattttgcat aGATTATGCAGATTACAGGGTAATTCCCTGTTTTCGATCAATTTTTGACc acaacattttttttctctcatgAGAAGAAACTTTGGCTTGAATGTTGtgg aaaaattgaattaaatttaCTGGTGACTTAGTCCGCCAATCTCGCCTAAG GTTCATTAAAATTAATTTGTATTTTTGCATTTTGCCAAAATAAGGCAAAA CAGGACAAATTTAACCAATATTAAACTGCTTGCTGAAATTAGTTCTTGCC AAATAAGTTGCCTTAATGTAGAAGGAATCTGcatgccaaatatctcaaac catctgatcatccctttaattattattattattagcatggtgtctacggg accttgaaaaccttgaaattggactaagcaaccttgaaaaccttaaaaat gcATGATTGTGACTGTATAGTTGTCTTGTTTTGGCTTGGGTCCTGAATAA AGTTTTGGTCTATGCTAAACTCTAGGAATTTTCTtgttcgcttcgctcgc aatcaTTGTTTCCAAACCAACTACTGGTAGTAACATCTCTTGCACCTTGT CAACAAGTCATATCCTACTTAAGTCGATTTGAGTTCTGAGAAACCTTGAA AATAACCaataaatggtccaaaaaaccttgaaaattttgccaaaaaagct ttgaaaatcTTGGAAATGGTGACAAAAATTCTGTAGTCACCCTGATTAGT GacttaagaatattttgaatttggcATCAATAACTTATTTGTATGAATTT TCCCTGAAAAGAGAGTTCTAAGAAATAGAAATATCTGGGCAGatttgaaa aagttaaatttggTAAATgacccaataattttttaaatttgggaaaaaat aaatttccagGGAACTTTTAGCTGAAAATTTGAacttaaaaaaatgaatt tttcaagtcagtcttaatttttcatcccaCATAGTTTGAGttttattttt gctaaaaagcccAAAAATGGTTAGTAGAAGCTCAAATTTAAATCTTGCAT AAATTAATTCAAGTAAAGATCGTACAATCTCGGATCATTTGTCTCATTTG TTTGACCAAGTCTCTACcactctaccactgcactatggttggtatatttt ttacaattgtttttaattttttaacaaaactaTTACTCTTTCTGTTTTAG GATGGCCAACGTTCTTATTGTGTCCGTTGGAAGGATTCCTGGCTGACTGA AGAGCTTCTCTCCCTAACCTACCAACACCTTATCAACGAGTTCTGGTCAA CCGCAGCTGCCAATGTCAACAAAGAGCAGACagaaaaagtgaagaaatcG AAAGCAACcaacataaaaatcataaataagcAGGATAACTATGAAGCTGT GTCTGTCCAGCCGCAATATCAGACAACATCCATAACAGTAACTTCACCGG GAAGTGCAACCCAACAGCTGGTTGATAATGAAGCTAATCTTAAAGAAATG ACTGAAACTACTGCAGCAGCTCAACTTATAGACCACTCTGGTATCCTAAA ACAACAAGTAATACCAAAGATTCCTGATCAAACTGGTATCAATGCCAATA CATTAAGCTCGATGGTTGTTACTAGTGATGTCACCTTAGCTGCTTATCCA AACGAAGCCAACCCTCCAACCATGATTCCACAGCAACCAACCATACCAAA ATACCAACAGGCTCTTCAACAGTCGATCTCGATCCAACAACAACAATTAA ACCCCGATTCTGAAACAGGAAAAGTCACGTTTCCAAAACACGTTTTCTCT CAAGCTCGATTTGTTAATAAAAAGCAACAGCAAACTCTTGTGTCTTCCGA ACAGCCACGAGTCAACTGTGATATTTGTCAGAAATCCTTGAAAACCAAGA AAATGTTGTGGGCACATAAAGTTGCTGTTCATTTCGGTGGTAATTTTCCC TGTGAGATTTGTGGCAAGAAATGTATAACTGGTGCTGAGTTGAGACGTCA CATGACATCCCATTCGACCGAGCGTCGTTTCGTTTGCCAGTATTGTGGAT TAGCCTATAAACGATGGTCACACTTGTATCAGCATTTGCGTGTTCACgaa gaagagaaaaatttccGTTGTGATGTTTgtcatttgaatttcaaagtTCA GTCTGAATTGAAGGATCATTGTTTTGCTGAGCACTCGGACGGTAAAATGG TCCAGTGTAGTGTATGTAAACATAAGCTACAAACACCTCTTGCCGTTTAT CATCATAGTATGAAACACACAGGTACTCGTGACTTCATTTGCGAGATTTG TGGCTCGAATTTCAAACGAAAACAACATCTGGTTACTCACATGAAAACAC ATTTGACGGAAAAGAAAGCAACCGATGGTAGTGAAGAAGTGTATCATTGT CAAGCTTGCGATGAAAGTTTCACGTTAAAAATGGATCTGAAAGCACATTG CACAGCCGCACATCCTTTGCTGGGAGACGAGAGCGTAGCTTGTAGAACAT GTCAAAAGAGACTGAAAGTATCACATTCAGTTTATCTACACGGCTTACGT CATTTTGGTGCACGTGACTTCAAATGTACGTTATGTAACCAGTTCTTTAA AAGGAAAGCCCATTTATTACGTCATTCATTAGATCGTCATCCAGAACAAC CGAGAGAACGAAAAAAACGAACAGTCCAAGTCGATGGAATCACATGCGAT CTTTGCCAGAAATCTTTCAAGTACAAGAACGCACTCGTCAAACACATGAC AACCNCATGCGATCTTTGCCAGAAATCTTTCAAGTACAAGAACGCACTCG TCAAACACATGACAACCCAACACGGAATATTACCATCTCAAGACCCAAGT ACTGAACTTGGCATTGTCGTCAAAAAAGGAATCAAACGTCCTCACAAATG TGACGTATGTAGCAAACGTTTCAAATCCAAAAATGGTCTCGCTAAGCATA AGGTTAATAAACATTCGTTGGAAAGTGAAAACAGTATTGTGATTCTTGGT GAAGACGGCTCAAAGGATTTGGAGGAGAAAGGAAACGTTCGCGAAGAAGA TGAAGTCGACGATGACGATGACGAAGATATCGAAACAGATTCTGAAACTG AAACGCCTCAGATACTGCAAAACCAAGCTATTGCTGAACCACAATTACTT CAAAACCAATCAGTCGAATTATCTTCATCTTCTCGGCAAAAAAGTGAACC CATGGAAGTTGACCAACAACAACCAGAGATGGTGGACCATGACGACAATG TGTTACATGAGTTGGATGTTACGACAAACAGCGATGATAAGGATGCTACC AATAATTTCCGTGTAGTTCCTATTGAGCATTTCAATACTTCAACTGGAGC AGGGACTTCCAATGTGGGCTCATCAGCTGATAACGTACCACACCAAGTAA TCACTGTAGACGAAGCTACCGGTCAAATCATCCTGATGACAACAAATGCA CCACCATCCAACCAACAAGATGTGAAAGACAACAAAACCGGACCGTCGGA TGTGGGTACAAACCAGATTATACCTGTCGATGATGCATCCAGAGCCTCAC CGATCATCACAGTACGAGAATCCGATCAATCAACGAGTGCAGCATTCGAA GGTCAGGCGGTCGATCCTTCTCAAATCCGGGCACTCACATCGGCAGCCCA ACAACAGCAATTAACTACCGGACAGCTCCAACAAGTACAAATCGGACAGA TTTTGAATCAGGATGGAGTCACGCTTGCGTCAGTACCAATCCAATCCGTA CAAGGAGTAGGTGATGGTCAGAATATAATCAATTTTTCACAAGGAAGTAA TGAACAAATTGTTGTTTTACTATCCGCTCTGAACTCTGAGAACATTCAAC AAATTCAAtaacatttcaatttcatcataatCGTTTAAGACAAAAGGTTT TtctagtttttattttattttttgaatacgTATGTTTTAGATATCGATTT CAAACTGAGTTCATTTTCTGccattttttaatattgaatgattttttttt ctagcCTATAATATGTGCTCGGAAAAAAAGCGGTACTGATCTGAAAAAAG TAAATTCATCAAATTAGTCCGTTGTTCAATTTCCAATTTCGAAGTATATC AAGAATAAGTGAACACCTTTCGTTTATTaaatagatttaaaaattgCGAT CAATCTTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001345TCONS_00001345Clytia hemisphaericatranscript
TCONS_00001346TCONS_00001346Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001345-proteinTCONS_00001345-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:499806..508214 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
44.9 43.53 23.31 20.78 80.84 62.77 48.79 49.41 21.27 27.28 24.29 19.24 18.59 24.1 19.57 28.66 25.97 27.87 11.05 9.77 20.27 19.62 38.03 35.38 35.1 33.62 9.3 9.47 29.51 30.84