XLOC_000307 (gene) - C. hemisphaerica

Overview
NameXLOC_000307
Unique NameXLOC_000307
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:1534920..1544240+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000307 ID=XLOC_000307|Name=XLOC_000307|organism=Clytia hemisphaerica|type=gene|length=9321bp|location=Sequence derived from alignment at sc0000002:1534920..1544240+ (Clytia hemisphaerica)
ATCATTTGTTCTCAAAACTGTATACAAAAACTGGTAACATTAAATATTGT TCACAAACTTTAAcacctttaaaattttgttaaagtTTTCAAGTTTAACC AATTTCAATTTAGTTTTGTTTTAACTGTTAGCCAACTTAGAGCTAGTTAA CTGTTGGCTAGGTTTAACTGAAAAACAACTGAAAGAACCTGGTTAATTAA AGTAACATTATAATTCAGACTCAGATTTGATTGTTACTTTACGATTCAAA TTCTTGGATGATTGAAAACATGGCAACCGCCTTGCAGCAAACGGAGGTGT TCGATGCTAACAAAAACAATAATATTGAAATTGGTAAGCATGCTACATta ctgtacagggtgtccctaattaaagtatcgagtttgaacatgcgattgag tagaaaagtttgtgtgtgttatcgctaaaatataagaacgttctcacagg cttattacaaaaggtagttacaacgtataaattaatcgtaatgacaaaga aaaaagagggagagcttaaaatacaattttgtgaacacgcacatagaact ttctactcatagttgtgtttcgactcgatactttaattagggacaccctg tattatatcatgaacatataaacaacTGGACATCCattctttttgtagaa aaggctgctagcttcgttgccgcctcgttaaaagcataaaatgaaacaat cgattttgatgatataccacttgggaataccttgctaacaacgtcaaaac ttcgacaaaagtctctgttgttctactcttctcaagtcgttTATCTATAT NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNgttcaagctctatcaatccttttacct aaataattcaaagaaataaaattatgacggagtattgtcggatttttcat accaattttgaaatacaggcggtaacgaagctcgcttcaaagagacaata aaagatagacgtccagccgtttatatgttcatgattatATATATCTTCTT TAGCAAATCCTAGTTGCTGAGAAGACCCAAAAGAACCATTAGAAAATCTT TGTTGAGGCTTGGCTGTTCTTACTGTTTTAAGTGAAGGTGAAGTGAAGGT ATTTAGAAATTATTATCGCTTTTACAGAACCTtcaatttgttcaaaaatt gaatcACCGTCCTCAAAGACTCTTACTTTCACTTAAGTTGTTCTTTGTAT TGCTTGCCAATTTTGCCATATTATTCCAATGAAATTATTCTTTTATCGAA AATATCCGAGATTTTATATTTACATGGTGCTTTAGACTAAAGAAATATCT AagacatccccttctcacagacccactgggatccCTTACCACTTAAaata ttggccaaaatatcgtctccagtggaaaattatactttaaTTTTAGTCCC CGCttaaaataatcagataagctaAACTTCACTGCAGAATATTGTGCGAT TTCTTTCATTTCCACTGAATcttctggctcgaaaacaatggaattcaaat ccccagccataagaaaagatgagaatatcaatcctcATCGAGGTTCAGTC CGGTATTTTACCCCGACTGGCTGAGAAAGTCTttccgggtctgtgagaaa ggggcgTTCTAAGATTTcctaaaagttaagaatatacgatgaaatggaaa aacaacattcttatgaaaaatataGATTCTTTGTCAGGCATTTTTCAGCA CTTTCAgcctaaaatcattttttcatcatattctcatttttcaaccattt cagggtgggtgggaaatttttggGTTGTATTCTGAATGAAGCACAACTGG AATATGGTTAAGACGTTTTACAGTCATTTGTCACTTCTGACATTGGGGAT AATTTTGGTCCTGACATTATTTTGTGATCGCTTTTGATTTGATTAAGCAT AAATGAGTTTTCGCGTCGCggacatttttttttctctattcATGTTGCCT ATGTTTCATTTTCGAGGCTTAAATTTTTAAAAGGCGCGGTTTGCTTGCGT AAAAAATTGTAACATACTCATTGAGTATAAATTCATTTATTGTTTCGGTC ATTGGTTAAACATAAAACCGCGCGCTATTTTTGAGCATTGttaaaattct ttttatttttttattttttttattttttgcaaagaaaatgttttttgagc TACCTTTCTGTTTTGTTTCTAATGTTTAGAAAACCAGTTCAAAAAGcgtt ttgaaacatttttacaaactttcatgTTTTGACTggtattcaaaatttca aacgaaTTCCAACCAAAACCTTTTTTGCTGAAGACGCagttaaaaatatt gacaaaaattgataCCCTTTATATgacttgattaaaaaaataaaaaaact tgtaattttTGCAGAGAATTAGTGCgcgcatttttctttttaaagccctc tttgttttgatattcgGCATAACTTTTAACAAAAGGCTCACCCCGCgcgt tttttctttcttgtgttctattttatttcaaaaatttaaagggACCCCAT GACAATATAGACGCAGTGTGGTGTGTAACTTTAGCTTTGACGCGATGAAc cgtttttaatgaaatttaaaacacTACGTGATACCTCTTAACGTTTCACG CTCAGGTTGTAAAATTCGAGCTGAATTAGACTGTTGCAAAGTTATCCAAT TATATTATTTGTCTATCGTGACAGTTTGTTTCTAAATACTGTAAGGTGGA TCAGAGCCTCGGACTCGGTTTCTAAACAACAGAGCACTTTCTCTAATAtc aacccccgggggggggcactcaaggtaaataacctaccagacgttcggcc cttaagggtaggtttttcaaagttcagctagtgcactgtaagggtaggaa attacaaaactgcactgaactgcactgtaagggtaggaaattgtgataaa aggccaattttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNgaacaattgcgcggaacaatagaattcaaaagaatactg caagcaattacaaatgccaggctggtctaaacgcagccactaGCAGCTTT CAAAagctttgaaaatctttgtAGAGCTTCGAAACCTCCTAACgcgtttt tctataagaactaACTATAAAAGAACATGCGGCTAGTTTTTACTGTTTTA TTCAAGGTTTTTTTACGTTAATAACCAATTTTGCaagattttcatcattt tgatgTGAGCAAagaaaattgcgtgattgcgtgttGGCAAGATGGGGGTT TATTGCTGGGCTGGGGAGACCATTGCTGATTTAGTTGATTTTTCTTGAAG AGAGGTCAATCTTTTCCTCCTCCCTTGAAATGAAGAGATCAGATCTTTGA GatatttttacgaattttcGGGCTGGTTATTCTTGGTTGTTTAAACCAGT TCAGCTCTGTTTGAAGACAGGTTTTATCTTAGTTTTGTACTCGCAAACGA AACACTCGAAACAGATTTTTTTTGACGGAACAGAACAGAATATAATAACT CACTTTCGTTTAACGAACTTTTTCCAACGAAGTTTAAAATTCTATCTTTG GTAGAGATAAAAAAAGTTTGGtcaatccaaacataaattgtagTAGATTG TAGCCGCtagaaagtttttttcataggtaaaatttttcttctttccctTT AAAGAATATTACATACAGAATAATTTTTCCGCTTACAGCTTAAATTAGCG CGCTCTTTGAAGTTATTGTTCATAAGGCGCTATTTTtgagaatgattttt tctagCTCATTGATTTTACTGCTTATTCAAGCGAAATTATCGCGCGCGCC ACGAAAAGTTGTTTTTCTAAAGTCGCAAAAGATAAGAGACATGGCTTTAG AAACTCTTTAAGCTAACCTATAAACCCTCTTTTCTATGCTTGCAACGCCC CTACCACACAATCCAGCTGCATAAAATGTATACAAAGTTGACTGTTTTGA ACAATTTGCTTTGGTCATAATAATGATATAATTATATCAAATTACTACAT CAATAGGCCATAATTATGTACAATTTAAGCTCTTAAATTAGAAGTCAAGC AACTTGGTAAATTTCCCAAGCAGGACGTACAAGCAAAACAAGGAGCCTgg attttgcaaattttctttctttctttttcaaatgagAGGCTGTACTCACA CTTTGAGCACACTGAGTGCATCAACCGTGATAAGAGTCGCACGCGCGCCT ATGTCGCACGCTCTCGTAAACATGAACAATAGAATGGAACTTTAGCCAct attgtttcttttgttttcattgttcTCATTTgttaaacaataaaaaagaa gaaagttttccaaactgaaaaaaaaattagaacattTGTAATCTAACTTG AACTCAGACGTGTTTACGGGTCAGCCAACCAGaaaaggtttttgaaaaca acCATGCATACGTTTGCTGGATCTTTGAACCAAGCAATGTTTTTGCAAGA AGCTACTGTTCCAGACTGTTTGAAAGGTACTATTACTAGATTCATTGTGT TTTGATAATTTGTGAACTGATTTGCatggttttaaagttttcatattttt gttcTCTGGTTTCGGCTTTGGTTTATTCTTTGGTTTCAAccaagccttgt gttcttataaaaaagcatgtttaATCTGATTTGCTTGACCTGATTTTTGC TTGACTGCTTCgtccttcttttttttttttgaaacaccgGTGTCACAGGA AAAAAGTACTCCCCGAAAAAAGTACTCCCCAGTACTCCTGGGAGTACATT CTTCCCAGGAAATTGCCACCCCCTCCAGGAAAAAAGTACTCCCCATAGAT ACTATGCTGGGAAGTCAATTTTCCATAAAAGTTATTTTGAACTATTAACC GACCCATCAACTTTGAATTTAAGCGAAGTTTCAGATTTATGGTcgagaaa aaattgaatacttaCTAAGTCAGGTAAAAATTTAGTTTGAGAAGAAAATT TGGCTGCTCGGAGACCCTTTATCCAAGTTTGGACTAACTTGTTTAGCTCT AAAACAAGCCTCTAATTTTGCgtttcaaatattatttttctaaatagggt gtaaatattctgaaaaaaatcctGCAAAAAAAGTAGATATTTTACTTGGA TAGCCCAAATGTAGGACTACTTTTAGACAGTATTTCGATTGTTTATACAc ggtcaaaatttcattcaaacaaAATAAGTGCTTCTTTCAATAAGGATGTG CAGTTTTTCTTTGAGTTAAGGTACTTTcaacaatttggaagcgctcttaA GCACTTAAGATCTAAAATGTTCAAGAATAGTCCAATAAggtcccaaattg aaatattcgattacatttaacaaaacttaaaagcgactttctcgccaaaa caagaaataaccaaaattctcaatatattttgacacAAATTAGGGGAGTA CAAATTTCCCAGAGGGGTTAAGAATTTCCTGGGAAAAAAGTACCGGGGAG TATCTATTTCCTGGGAGTACTTGTTTTCTGTTACACCGGTTTTAGATAAT CTTTGTATCTTGGTTGCATCTgcacattttgttttttataagaacatttt aaaatattcttattttcaccattttgtgagaatgtttttcaccattttct aaTAAATAGTGTGTTTCAGAgtaaagccttaaaacgttCTTTTGGTCAtc aaaaccttatgttcttataaaacgtgAATACATTTCTGAATGTCTTCCTT CTTGGACTGGAGTCTTCTTATCTTTTGACTTTCGTGTATTTATGGACAAC GCTCCTTTACAGAGCAAGGATACATCAAAAGATTTTACctcattggaaag ataattcAACGTGGATTTctttagaaattatttttaacttAAAGAAAAAC ACCATACTGCTAGGATAGGATTTAGAATGTACTCAAAATTACGAATTTAA ACGATAAAACTACATAGTGGCGAACAATTGGTCTACTTAGGCGgttcttt aaaaagtttttgcgGGGTCTTTACTTCTCCCTTAATAAATCCGTTTTAAG AATCTTAAAGTTTATCATTATATTCAAGTTCACTTCAACCATTTTCCATT CAGCATCACGTCCAAAGCCATAAAATCctaatatttaatttttcgaattt tcaatTTACAGAAACTGCCAACAAATTGGTGGAGATGTATGAAAAACAAG TGCAACAAGCAGCTCAGAACATCAAAACCGAACAAGTCGTTGCTAACAGT ATCGCCAACACTCTTCTACAACAACCACAAACTCTCTCTCAACAAACCAC AACTAACAACCTGATTCAACAACAGCAACCTATCGTGCAACAAAATCCTC AACAAATTCAACCAATGGACACCACAACAAACACAACAGAAACAGAtaca acaaacaacaaagacaacTCAACAGAAAACATTGATGTCACTTCAGTGTC AGTCGCTAACAATGTCGCACACCAACAACATCAGCAGCAACTTCAACAAC AGTTGCCACAACAATTACAACACCATCAACCACCacaacaaaacaattta aaCATAGTTCTTAATGGTGACCAAAACCAACTGAAACCATCACCGGAAAA TGTGGATCCAAACGCTCAACAAATGGGAGTCTACAACCGTGAGATCCCAC CACCAAACAGCATCTATGGTATCGAGAGCCTCACCAGTAAGCCATACGAC GCTGAAGCCTCCAGACAACTCACCGATGTGATGCAGTCACCACGATTCCA AAACGGCTACAACACCATCGCGTCCCCTCATCACTCCTCCCCAGACCGCA ACAACCACCGCATGGATCAGACCGGCAACTGGCTATCACCAGGCAAGAGT CTACCATTCAGAGGCCTGTGTCCACCTACATCTCCCTACGTTGACAACCG TGACAGCATGGTACAAGCAGCTGCTCATGCTGCTGCAGCAGGCACCCAAG CAGCCAGACGATTCATGCCTCCATTCTACGGTGGCACCAATCGGAATTTC ACCCACCCTACAACCAATGGTACCGCAGACCGCAACCGATACGGCAACTA CCCTGTTGGCAGCCCTATGATGTCCACCCTAGGCTACCCAAGAGACACCA CCATGGATAACCGATACAATCTTCACATACCACCAGCTCTTAACGGGTTC GGAGAAGAAGACAAATTCAAGTTATCCCCACCAAGTCTTGAAGACAAACA CATCTGGACCAAACAAGAGGTGGAGCTTCTCTTAGATCTCTACGAAGAAC ACAAATCGAAACTCCAAGACCCACGTGTACGAAAAACCAAAGTTTGGGAC GACATTGCTAAACATATCCACGAGAAACTGGAAGCAGATGTCAATGGGTG TCAATGTAACCAAAAATTTCGTAATATGAAAGCTGATTACCAAAAAGTCG TAGAGCACAACGCAAGAGCTGGATCATTCAGAAAAACATGCAAGTACTAC GACCGGTTAGAAAAACTCTTAACACCAGTTAGTGAAACCGATAAATTACG GTGCGACGAAAACGGAATGAACAATACCGGTTTCGCAAACGGATTCGGAT CTAAAGCTGGTACACCAAACGGCAACGGATTTTATGACAGTTCACGAAGT ACGACGTCctccgaatgtgatgataaagCAAGTCGTGGTACGCCCTCTTC GCCCGAGAAGCGCACAATTGATCAAGTTGAAACTACTGGCGATGATTCCT CGCCTCCGCCCGCTAAACGCCCTTGTAATGATTGTTCTGGATCTGTCAGT AAGAAAGACTTGGTAGAtgttttgaaagactttttaAGAGAACAACGTAA GCGAGATGAAGAGAACTTTGCAAAATTACAGCAACTTCATAAAGAGAAAT TGGACGCTGTGGTCAAGTTTCTGGATATGTTTCAAGAACTAGTAAAGAAA GTGTAATGTAATTTAAATTGATTTCTCTAGTGTAACCTATTTTACCACGT TAACATTTTCTTAACTTCTTAACTTATACCATAACAGATTTCGCTGCAAT ACTCAAACTTAACTGTGGCTTTGAAAAATGCTAGCTTttagaattcattt ttttttttgtatcttcaattttattttatctagTTTGAACTAAAATACCT AAAGTGCTAAGTAATTAAATCACtaaattttgtttatatctGAATCTAAT TTTTATCACGTTTAAAGCTCTTGTAAATATTTTGTCAATTTAATAAATTT CTGTGTTTTAATTTATTCATGATTTATTTATTGCCTAAgttattatttat taatttattatgATTTATGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000489TCONS_00000489Clytia hemisphaericatranscript
TCONS_00000490TCONS_00000490Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000489-proteinTCONS_00000489-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:1534920..1544240 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.02 36.95 31.39 16.75 17.29 10.71 3.79 17.59 17.97 16.81 11.41 13.79 43.9 20.64 13.51 0.06 0.21 9.77 9.13 4.8 5.72 6.6 11.42 1.12 0.48 0.58 0.61