TCONS_00000489-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000489-protein
Unique NameTCONS_00000489-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length606

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000489-protein ID=TCONS_00000489-protein|Name=TCONS_00000489-protein|organism=Clytia hemisphaerica|type=polypeptide|length=606bp
MIENMATALQQTEVFDANKNNNIEIETANKLVEMYEKQVQQAAQNIKTEQ
VVANSIANTLLQQPQTLSQQTTTNNLIQQQQPIVQQNPQQIQPMDTTTNT
TETDTTNNKDNSTENIDVTSVSVANNVAHQQHQQQLQQQLPQQLQHHQPP
QQNNLNIVLNGDQNQLKPSPENVDPNAQQMGVYNREIPPPNSIYGIESLT
SKPYDAEASRQLTDVMQSPRFQNGYNTIASPHHSSPDRNNHRMDQTGNWL
SPGKSLPFRGLCPPTSPYVDNRDSMVQAAAHAAAAGTQAARRFMPPFYGG
TNRNFTHPTTNGTADRNRYGNYPVGSPMMSTLGYPRDTTMDNRYNLHIPP
ALNGFGEEDKFKLSPPSLEDKHIWTKQEVELLLDLYEEHKSKLQDPRVRK
TKVWDDIAKHIHEKLEADVNGCQCNQKFRNMKADYQKVVEHNARAGSFRK
TCKYYDRLEKLLTPVSETDKLRCDENGMNNTGFANGFGSKAGTPNGNGFY
DSSRSTTSSECDDKASRGTPSSPEKRTIDQVETTGDDSSPPPAKRPCNDC
SGSVSKKDLVDVLKDFLREQRKRDEENFAKLQQLHKEKLDAVVKFLDMFQ
ELVKKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000307XLOC_000307Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000489TCONS_00000489Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017877Myb-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..45
NoneNo IPR availableCOILSCoilCoilcoord: 564..584
NoneNo IPR availablePFAMPF13837Myb_DNA-bind_4coord: 373..461
e-value: 4.5E-15
score: 55.7
NoneNo IPR availableGENE3D1.10.10.60coord: 15..445
e-value: 2.4E-6
score: 26.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 485..553
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 374..432
score: 6.458

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000489-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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