XLOC_000305 (gene) - C. hemisphaerica

Overview
NameXLOC_000305
Unique NameXLOC_000305
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:1485467..1490379+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000305 ID=XLOC_000305|Name=XLOC_000305|organism=Clytia hemisphaerica|type=gene|length=4913bp|location=Sequence derived from alignment at sc0000002:1485467..1490379+ (Clytia hemisphaerica)
GATACTTTGGAGAAAGAACGAAAAGGGAGTCGAAATTGTACTGCTCCCTT TTTTTACTTCCAAAACacacaaaataaagaaaatattcttattttctagT GCGTCTTATGggaataacaaaataaattgttattatttttcataCTGAAT TATTAAAGAAGGCTTGGTTAGCCCCTTAAAACATTTACACTACTGTAGTG TCAAAGATTACAAATTATTGAAATTggtgcaaaaatattttttattggtt tgtttGTTGGTTGGAAGGGCAAAAACCTTCATTGTTATTTTAAACAGGAA AAAAGTGTGAAGAAAGTTTTAACTCGTTATTTCCTTGATAAAGGTGAAAA AGAGGtggagagagagagaaaaaaagactTGAACCAAATATCGATACATT TGATTTTGGGGTTCATTATCAAAACGCTATAATGATGACTTTTTGTTCGA CGACCAACAATCGAAAGAAGAACGCACAATTCACAATCTCGACTAGTGCT AAAGAAAAGACTGTACCGAATAGTTACGATAATAGATCGTTTTTACGCGA TTCTTTTACGAACATTTCTGATTACGACAATCAGCAACATCGTCAACAAC GCTCGCCGATCCTTTCCAAAAATAACCGAAGTTGTCAATCTGTGTACAAC GAAAACATGAGAAATTTGACAAACCTGTCACTATCACCGTCACCGTCGGT AAACAGTAAAGACAAAACAATCATCTCAAATAATGATGTTACTTTTTCGA TCGATGCAACTTCTTCATCAAATACTAAACTACCTCCAATTATGGATGAT TTATGCCTTAGTAACAATAAAcggaattttgattggttgaactGTAAATC TACAAATAACATTGTTGTAAACCCATTATCAACTTCATCCACACTATCAT TAACCGCAGCAACAAATCATCATTCTCCTCTTaaacaacaatcgaacaat TTAATTAAAACTTTCAGTAACAGTAACAACAAGATAGACACTAAAGCGCA TTTCTCATCGTCGTCAACTATAACACAATCACAGATTGGGACAAAATGGA ATAAAACTTTCATCAAATCCTCATCACAGTCTGCTATCTCAACACCAAGA ACAATTAATTTAATGTCACCATCAAACAGCGTGCCTTCTTTTAATTATCG AGGAGGTTTATCGAGCATGTCGATTTCTGAACGTGGTGGAGATTCGGGTC ACAAAGAAGAGACCAGCCGAGGGGGATCGGACAGAAAGGTGTCTTCTAGC AAAGGAACACTGGACAAATATTTCTCCTCTGATGATATCANTATTTCCTT GATAAAGGTGAAAAAGAGGtggagagagagagaaaaaaagactTGAACCA AATATCGATACATTTGATTTTGGGGTTCATTATCAAAACGCTATAATGAT GACTTTTTGTTCGACGACCAACAATCGAAAGAAGAACGCACAATTCACAA TCTCGACTAGTGCTAAAGAAAAGACTGTACCGAATAGTTACGATAATAGA TCGTTTTTACGCGATTCTTTTACGAACATTTCTGATTACGACAATCAGCA ACATCGTCAACAACGCTCGCCGATCCTTTCCAAAAATAACCGAAGTTGTC AATCTGTGTACAACGAAAACATGAGAAATTTGACAAACCTGTCACTATCA CCGTCACCGTCGGTAAACAGTAAAGACAAAACAATCATCTCAAATAATGA TGTTACTTTTTCGATCGATGCAACTTCTTCATCAAATACTAAACTACCTC CAATTATGGATGATTTATGCCTTAGTAACAATAAAcggaattttgattgg ttgaactGTAAATCTACAAATAACATTGTTGTAAACCCATTATCAACTTC ATCCACACTATCATTAACCGCAGCAACAAATCATCATTCTCCTCTTaaac aacaatcgaacaatTTAATTAAAACTTTCAGTAACAGTAACAACAAGATA GACACTAAAGCGCATTTCTCATCGTCGTCAACTATAACACAATCACAGAT TGGGACAAAATGGAATAAAACTTTCATCAAATCCTCATCACAGTCTGCTA TCTCAACACCAAGAACAATTAATTTAATGTCACCATCAAACAGCGTGCCT TCTTTTAATTATCGAGGAGGTTTATCGAGCATGTCGATTACTGAGCGTGG TGGAGATTCGGCTCACAAAGAAGAGACCAGCCGAGGGGGATCGGACAGAA AGGTGTCTTCTAGCAAAGGAACACTGGACAAATATTTCTCCTCTGATGAT ATCATTCACGAATACCCTGATGAAAATATACAAAACGGATCATTCTTAGA AATCGGGCAAGTCTGCGAGGAGGAGAGCTCCACCGATAATGACTTTATAG CGCCGCTTGAACGGCCTATCGGTGGTTTAAAACGCTCATGTACGAATGAT GAACGTATGATGACCTTGAGAGAGATCCCGTTACAACGCTGCCAAAGTAT TGATAGCACAAAAGGTCTTCAAAAACAAATAGATGAACAGGCTCGCTTCT TTTCAGAGCAGACAAGCCTTCGACCTCGTCAACGCAAAACATCATCTAAT GAGAAACCTCAACAAACAAACACTAATACAGCGNTGTGTACAACGAAAAC ATGAGAAATTTGACAAACCTGTCACTATCACCGTCACCGTCGGTAAACAG TAAAGACAAAACAATCATCTCAAATAATGATGTTACTTTTTCGATCGATG CAACTTCTTCATCAAATACTAAACTACCTCCAATTATGGATGATTTATGC CTTAGTAACAATAAAcggaattttgattggttgaactGTAAATCTACAAA TAACATTGTTGTAAACCCATTATCAACTTCATCCACACTATCATTAACCG CAGCAACAAATCATCATTCTCCTCTTaaacaacaatcgaacaatTTAATT AAAACTTTCAGTAACAGTAACAACAAGATAGACACTAAAGCGCATTTCTC ATCGTCGTCAACTATAACACAATCACAGATTGGGACAAAATGGAATAAAA CTTTCATCAAATCCTCATCACAGTCTGCTATCTCAACACCAAGAACAATT AATTTAATGTCACCATCAAACAGCGTGCCTTCTTTTAATTATCGAGGAGG TTTATCGAGCATGTCGATTACTGAGCGTGGTGGAGATTCGGCTCACAAAG AAGAGACCAGCCGAGGGGGATCGGACAGAAAGGTGTCTTCTAGCAAAGGA ACACTGGACAAATATTTCTCCTCTGATGATATCATTCACGAATACCCTGA TGAAAATATACAAAACGGATCATTCTTAGAAATCGGGCAAGTCTGCGAGG AGGAGAGCTCCACCGATAATGACTTTATAGCGCCGCTTGAACGGCCTATC GGTGGTTTAAAACGCTCATGTACGAATGATGAACGTATGATGACCTTGAG AGAGATCCCGTTACAACGCTGCCAAAGTATTGATAGCACAAAAGGTCTTC AAAAACAAATAGATGAACAGGCTCGCTTCTTTTCAGAGCAGACAAGCCTT CGACCTCGTCAACGCAAAACATCATCTAATGAGAAACCTCAACAAACAAA CACTAATACAGCGGTAACAAAAAGCCGTAAAAAATTACTAAGACGTTCTA TGTCGActggtttttcgaaaataaaactCATCAAATCAAGCATTTCATTC ACAAAAAGTCATCAGCGTTTTACGGATGAGGAACTAAACAGCGTCGATAT TAAAGACTCTGACCATCAGACGTCGCGTCGTAAAAACACGTCGTGCTCGT CTCCTCTTGACGAATATATTGAAGAAATGAGTAAGGGAGAGAATCCTGAT CGGGATGTTGACTCGAACCCGGCTGCTGTACCGTTCTTAAGAAGCATTAG TGCTCCTGAACAAATCGATAAACTTGATGGCGATGTTTATGATGAAGATT TATCGGAGCTCTATTTACCGAGGCGTCGTGCAATTTGTCCAAATCTGCCA GTCCCGGCAATGAAGCAACTGAAAACATACCTGATTTTAACGAGACTTAA ACAATACTGTTTTGTATGATGTTGAGGGTAAAGAAGATGAAGAATGTGTA AGGAGGTAAACTTTTCGAAGCCACACCTATATTCCTGGAGCttgatttta tttgatttgcGATAAATGGCTCCAACTATAAAATACAATTATTAAGATCT GGGAGAAGACCGTGAGGCAGAAATATCAATAAGCATAGATATGATGTGTT TTTAACTGTTACAATTTTCTTATCATATGATAAaggaaagattttttgat ttgttttaaacaaaagagGAGACAGTTCTATGATATGAGGCTGGTTCTGG AAAATAGTGCGATGAAAAATACACTATtataaaattttgttgaaaatgtg TATCAATCTTGAAAGACTTGAAGtaagagaagtaaaaaaatctGTTGTAA AAGCTAACCCAACCCCAAGTATCAAAGTATGAACTGTaatataagatttt tttatcaGATCGAGGTTTTGGTTTAGATATATATTACAAGACGGAGTTAT CTTGATTATAGCTTTCTTATCTCTTGTAAAGCTTGGTTTCCACTGTGTGA TAACATGTGATAATGTGTGACAGGCAGCCTGTCTGGAACACACTATCACA AAATAAAATTCTATCTCATAGTGGAAACGTTTAAAAGGAGTTTTTATCAC GCGTTATCACACTGTGATAACGTGTGATAGTGTGTTCTTGGattgaaatg aatttcaatCCAAGAACACGAAAATTGTGTGAGATAACGTGTCCCTGGTA GAAAATCTTGATAAGATCTTACCAAGATCTTTTAAAGAAACTTGGCAAGA ACTTTGTAGGTTTCTTCTCAAGATCTGTGCAAAGAACTTTAAAGATCTTG ACAAGATCTTGACACGATCGTttaagatctttaaagatctttaagGATTC TTGAAGGTTTAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000485TCONS_00000485Clytia hemisphaericatranscript
TCONS_00000486TCONS_00000486Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000486-proteinTCONS_00000486-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:1485467..1490379 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.01 0.02 0.05 0.1 0.06 2.73 2.79 1.15 1.43 0.92 0.9 3.93 3.71 3.29 3.11 1.22 1.43 3.99 4.93 2.29 2.24 1.11 1.7 2.42 3.09 0.52 0.4 0.06 0.06