XLOC_000300 (gene) - C. hemisphaerica

Overview
NameXLOC_000300
Unique NameXLOC_000300
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:1335129..1343039+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000300 ID=XLOC_000300|Name=XLOC_000300|organism=Clytia hemisphaerica|type=gene|length=7911bp|location=Sequence derived from alignment at sc0000002:1335129..1343039+ (Clytia hemisphaerica)
ACCGGACCTAaggaacaccggacacgcgaaagtccggtgtaaaatgagaa atttttttaccaccggacaatctctacaccggacttaaagAAGTCGGATG Tcaggtgtcggagaaggatatttgtttccaccggacaatcaaaacaccag tcctgtgcgtccggtgtttcttaattttttgtttcataaatgtccggcgt ccaaaattacctgtatgcaacaccggactgacaccggacttattgcctcc ggtgtagcgaaaggatactttttaccaccggacaaataccgagacagtcc ggtgcgtcggcagggcgGGTCCTGAACCAATAGGATTTGAAAAACTGAGC TTGGCAGCTAGCTTTGGCTAGCTAAATTCTTTAAATGTCTCAAGTTCAGT TGTGACGGTTTTATATTTGTATTTGTAGTTCTCCTCTAAAGTTTCCGGTA ATAAAANCAAGTTCAGTTGTGACGGTTTTATATTTGTATTTGTAGTTCTC CTCTAAAGTTTCTGGTAATAAAAGAAAATCTCACCGAATGTGTCACACCC CACATTAAAACAGCCATCTTTGGATCATGGACTCTAAAAACTTTAACCTT TTGGTGAACGGCTTTcacctttttctttttggattttgtaaATGTATCTT TAATAGCCTCCATCTTCTTATTGTGTAGTATTACTAATTATCGATAATTT CAACAGAAATACAGCACCTcctaaagaaaaaaatgcatCTGGTTTTCACT TGAAGATTTTCAACTTTCCAACCTCGCCAAATATCGGCTTATCTGCCTGT TACGGTATAGTGAAGAAGCAGAACATGTATTTTGCAGAACGCTTTATTTC ATTAGTATTTCTTATATTACTCTCTGTTCCGTAATTTTCAAGAAGAACTC AATCGTATATGATCTAGTCAATAACAAACACGGCGGATAAAGTAGCGGAG CGTGAGCAAGCAGTAAATCgcaaaaactttttgcaaatactAAATTTTTA GAAGGAATTTGCTTCACTCCAAAACTGCAATCATGGtatgtaaattttct tttaattaagAGTTAATTCCtgtgtctcaaatattttgcttATTAATATT TGATTAAATGTGGCTGTCCTTTGGATGACAGAATCGTACTGAATGCGGAC GCCTGCAATTTTGCCACAACCATTTCATCTCCCCAGAGATTCGAATTGAT CGAaagccgaatcaattgaacacaatcaaaaGCAATcaaactagtgtata tgtataagaattgccaAGCGATCCTGGCAAGTCATTCGATTCGAACCATA CCCAATTAGGAATATCGTCAGTGTAGACTTgaataggaccctgccgacgc accggacttaacgaacaccggacacgcgaaagtccggtgtaaaatgagaa ttttttttaccaccggacaatttctgcaccggacttaaggaagtcagatg tccggtgtcggagaaggatattttttcccaccggacaatcaaaacatatC GGACATGCATGActagtccggtgcgtccggtgtttcttaattttttgttt tataaacgTCCggtgtccaaaattccctgtatgcaacaccggactgacac cggactaattgcgtccggtgtagcgaaaggacactttttgccaccggacg aatacaccggacagtccggtgcgtcggcagggtcctacttgaatcttcat acaaaaattacgggaaacgcatatttggtgaaaaagggtgcgctatcagt gaaaattatcgtgacatgttatgacagaaagtatgattgataaacttggt ggagttatcaaaacaaatttgttgtcaaagagataacagtaagtgaaaat aaaggccagatatcaacagtcccatgttgtttggaccaatcgtcccaaga aGTTAGAACTGTTGacggtaaaaagtaaaaaatctgtgacttGTTTCTCG GCTGTATTAGGGTAGacactcaaaattttaaaatgatctaaagtaaaata aataattGTAGGCTCATTTGAAAGCCCTCACATTCAGAGAAATCCACCAA GGAAGGGGTCATTTGTCCAAAATGGTTgagtatttcaaaagttataacaa aaagaatttgttaATATCTTACCTTTCACTGTCCAATACAGCAAGTCAAG CTAAACCTAAAGCACACCATCGAAGcaaaaaatattatgaaaaagGTCAC ATGACTCGTATAGCTAAGGAGCTGGTTTTTGTCTATGTGGGTAAGAAAAG TTGTCAACCAGCTATAAAAAATGTCAGATTTCAAAGATTTCCCAAGGAGC AGTTGATGatatgaaaaaaatacttttttactGTATCAAGTAAGATTAGA AGGACTAGGACACAAAGAAAAACAGTGCAAACAGAAGCACAAAAGACTTA TTATTAGACGATGAAAGCAATTATGGACTTCTAGTTTTTTGCATTGTACA GGTGAATAGTTTTCTTCAtaggggccattcaaaaagtacgttcgtcgccg aggggggagggggtcagcaAAAAAGCGAATGAAAACGAACNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN GGGGGGGTAACAATGGGGTAAAAATTTTGAGATAAAAACAAACGTaccaa aggggggggggtacttcaAAACGAACGCTGACGAACAAGGGGGGGTctga aaatagggaaatttggacgaacgtactttttgaatggccccatatttaaa aaaattatagacTAGTATTTGTTTTCTTCATACATGTAATTGATTCCTTA AGTTCAAAAGTTATCTTTTTTTCACCTGCGTGGTGTTTGTTGCGTTCAAA TTCTCTGACTTCCTTCATCCCTAGCTGTATTGTAGacatttaaaacagtt aaaaaagtGTATCATAAAAATGATGTCAAGTTTGTTGATGTATTTTGACA TATTACCATTACCAACAGTAAAATCCTTTATAATACAAAcacatgtcaat gttctatttTTCTGACCACCAATCCGGGGTGGGGGGCACTCAGGCAAATT GACTGACAgttatgtgcggcggttaagggtgtgtttttcaaaatatcaga aatgcactgtaagggtggatttttgataaatgcactgtatgggtggaaat ttcagcaaatctaggaaaaattgcaaatttttggtcgaaaatcttgatta ttttgctctaaaagaatttaaaatttgagCAAATGCACTGTGAGGGTATg aatttctccaattttttttctgcactgtaagggtgcgatttttTAGGCAC ATTGGACGTGTCAAATTTCAGAGGGCACTTAAACACGCAAGCACTTCAGA TGAGGGCATTTAGGGCACGTCACTTAGTAGACTCATTTTTCGGGAGCCAT GCAGGAGCTTGAGCTGAGTCAAGGACCATAAGGCAATAACGAGTCATAAA TATTGGATCAGCATAGAGACTCTGATAACGGTCAGAttcggctgaaattt tgaacacttgttccttgggtgaaaaCCTGTGGATGAGCTTCTCGTTATTG ATATTATTTTAAGCattcaaataattttgattgatttctttttattttca gagtATTATGAGCTACAATGGTTCAGCCTTAGTGGCAATGAAAGGCAAAG ACTGTGTCGCTATCGCATCTGATTTGAGATACGGTATTCAATTACAGACT GttgcttttgattttgaaaagattttccaaatcaGTGATAAATTATATCT TGGTTTGTCTGGCTTGGCAACGGATATCCAGACAGTGTAAGTTAGGCAAC ActtgtttgcttatttttaaaCATACACTAGCTAGAAACTGAGAGAGAGT ATAGAAAGGTGTCTTTTCCCCTTCTTAGATGGGTCGCTTCTTGACATCCT GAAGCTTCCTGCATATTTAGAAAATTAAAACCTTGTTGATTTCAAATATC TGTGTTTAGATTTTTCATATCTTTCATAGATAAAGTGCTGTAGCACTGCT AAGTTGGTCAGTTTTGCtgtttttggtgatttttggccgtttttttcatc ttcatttttcttcttcatttttgaatttttcaaatatcttttaTCTTTTA GATTATActccttggaaatatctttccaacggtgtataactcTCTAACAT AGCATAAATGTATGCTgagaaaaagtccaaaactgaagtgtccacatact tttgagacagacttttaTATGTGTATTATCTTGAAAGATCGGGGAAGAAA TAATCTATTTTTATTATGTTGATcttgaattgggcttttccagaaaaaaa attgaatatggggggcggaggatataacaattttcagtgatttacccccc ggacaaagtgacttttggcccctcGGACAATgggttttaccccccggaca gagcaaattcaCCCCCTGgtcaaggcaaattttgatgatttttcgctacc ccggacaatatatcctccaccccccatgtacggacattttctggaagagc ccattgcaacatttgattttaaaatattttaatccaTCTAGATCAAACTT GGCAAAATTCCGAACGAATTTATACGAATTACGTGAAAACCGAAAAGTCT CACCAAAAGCATTCATGAACATCATGTCAAATATCTTATACGGAAGACGG TAAGCTCTTGACAAACTTTATTTCTCAACACATTATGAAACTTCAATCAG ATTAATTTATTATATCTCTTCCAGAATCCTAATATTTCAGTTTGGAATTC GCTCTCAGCATTCGAGAACCTTATATTGAAGTTtttgttcccgtttcata tcagacacatgttttatATTAGGCCGGTGTCTCCTATTGTTATGTATTGT GCTTGATTTCGTGCCAAataaacaatgtttttctttcttctttctaacaa atattgctccacatccgtgtcaattcaatgtgaaaaagcctgaaaaagct tgtaatttaaaatgatgaataagcaaacgatattaACTTAGTTTAAAATT AAGCCTTCTGGCAACTCGTTGTGAGCTAAACCTTTTCCAATATCactgct ttaaaaagcctttcCATTTGTAGATTTTACTTAAGGCACATTACAAAAAT AGTGCTATTTGCTTCTTGTTTGAGTGAGtaaatttcatactcaaagtttc atgcccGTAAAGGATGGGAACCTTCATAGTGAATTGAACGTGCTCTTAAA aaatttctgacgtcaatttcacaTTTTTCGAAAGACTCGGGAAGAATTTT CCGTCGCTTATTTTACTGAAATTgcctatatatatatatcatgaaacttt gagttaagaaatttatttaaatcgttttttcttttctttcagtttcTTTA GTCTAATATAAAGCACTGTTATCATCAACATTGAGCACTCTTATTGGTTT TCGCTAACAAAAATCATCTTCACTCCTAATGTTTTTCAAACCATTTTCTC TTCTACTTTAGATTTGGGCCGTATTTTGTTGAACCCATCATTTGTGGGCT TCACCCGAAAACTAACGAACCGTATATCGCATCCTGCGATCTGATTGGTT GTCCCATGGAACCGGAAGATTTCGTGGTTGGTGGAACTTGTAGCGAACAG TTATATGGTGAGTAGGAACCCCATTTTCATTGGAGGGCTATACAAAGAAA TCATTGAGGCTTTTCAGTTTAAACTTAGTTATTTAATTTTCACCATTACA CATGGAAATACTTCTGCAAGCAATTGGCACTTTTAAGTCGAATGTTTCAC CCAGGATGGATAATGAAATTATATACCTTGCCAAAACGTGATCTTATCAA TATAATTTCTCCTCTGATTATCACTaagaaaagaattgaaaaaatgatAA ATGCCACCTTCCTAGCCTAGATTGCAGTGCAACATTAcatatttcataag aacaaactataaaagaacataagtcttcgatggctgaaattttaacagcg agttttaattttaaggctttgtggactcttaAACGCCCGTTTTCTTagca aaatgaacaaaaatactcgcACAATGGTGGAAATAAGAACAAcgtagagg ccactatgtcttcccgtgtgcagcagcttgtgcaaagggattttatgatt gaatattgttccttgaatgtagaagatcaaaatttgagaggtggggccgg gtgtgactacccgttgccatggaaactgacattggttactatggcaacca atataaaaagtcatcaaaattgaaaaaagaccCTCCagggaacataaaat attattacgaaaacgtttgaaaattcgttaaaaaaagtctattggccaaa attgacaatttcattttttgcctgTCGAAGGTTGGAGCTTGCCCAAACAC ATTatacaggcaaaatttaaaaatattaattttggctcatagacttctta aaaaggattttcagactttttcgtaataataatttttgttcACTGGAAAG TActctttccaaaaaaccaaaagtttttgaattttggcaaatttttgttt ttcgatgacgtcatcgttttatgacgtcattttgccttatttccttaata tctcctgatatattcattttcagatataggttgtgacctttttctttatc agttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaa attttcaattttgacgactttttattttggttgccatagtaaccaatgac gtcagtttccatggcaacgggtggtCACACCCGGCCTNNNNNNNNNNNNN NNNNNNNNNNNNNNctctcaaattttgatcttctacattcaaggaacaat attcaatcataaaatccctttgcacaagctgctgcacacgggaagctttt tcgcgacatagtggcccctaccatttttaggcttgaaactcaaaaagttg accaacggaaggcttcaaaaattttggatgttcttataaaaaaaagctgt TGTTTACTTTTCTTCTCCAGGAATGTGTGAAGTAGTGTGGGAACCAGACA TGGGACCAGATGATTTATTCGAGAGCATCTCTCAAGCACTTTTAAACGCA CAAGATCGGGATTGTATGGCCGGTTGGGGAGCTGTCGTTCATATCATGTA AGTCATCTACAACCTCTTGGCATATTAGATGGCAAACTGTATATTAACGT TTCATTGTTCAACTTTTAACTAGGCGGCTGGTATTGAAAAGTCTTTCAGG CGTTTTTAGATTGGTCGATTTTCGTTAAAATTACAATTTAGATTGCTAAA TGTCGCAATACTCTACCCTTCCACTCATATGGACCGATCTAATAAGGGAA AATTAGTGCGGTTCCCTACAGGCCAGCCCTTTAAAAGGTTCCTTTCATGG AAGAGCTTACCGAGAAAAAACTAAAAGTTGTCTCATAGCAAAATCGATGC AATGTTTTCGCAAGTTCTGCAAAAGATTTACtcaaaatgattgtttttcc tTTCTTTGTTTAGCGAAAAAGACAAAGTGACTACACGAAAACTTAAAGGT AGAATGGATTAAGCAGAAAGCAAAGCGAATACACTCTCAGTGGGTCACAC CATTGAAGAATGTTTTAATCACATAAATCAGTATAAGAACGTCACTATAA ACTACCAATCAAGCGAGTGCAATTATGGGTTACTTTCACCGTTACAAGAA TTTTTTTAGGAAGCtatttataattttcaaatatatttcctGCCCTGGAT ATTGAATATGTTGTTTATCTTTTAACCGTGTTACCaatatcagtttgagt tatatGAAAATCATTGTTGGCCTCGTCCTCAGTTTTGTTGTGCTAAATTT GTGCCAAATTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000476TCONS_00000476Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000476-proteinTCONS_00000476-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:1335129..1343039 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PSMB3proteasome subunit beta type-3 Homo Sapiens
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
201.08 208.31 143.95 138.73 94.09 73.2 115.07 125.43 128.39 119.12 108.66 95.02 68.61 66 76.38 87.8 104.57 105.81 36.31 47.93 81.19 80.4 97.11 92.04 99.31 94.45 84.97 62.78 71.52 62.3