XLOC_000285 (gene) - C. hemisphaerica

Overview
NameXLOC_000285
Unique NameXLOC_000285
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:899013..909064+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000285 ID=XLOC_000285|Name=XLOC_000285|organism=Clytia hemisphaerica|type=gene|length=10052bp|location=Sequence derived from alignment at sc0000002:899013..909064+ (Clytia hemisphaerica)
atgTGTTTCATTTCTTTTCTTATAGAATAATTTAATTGAattatgttttt tcttaaattggCAATTGGGATTTGTTGTGTGGTAGTTGTATTGAGCTCAG ACTGTTTAAAAACAGTGATAAACAGTAAAGGGACCAAATATTTTCTCgat gagatttttcaaaaatatgctaCCAACGATAAGATGACAATCACCGAATT TTCTacattcattaaaaaatttgatattgGTGAGATCAAGATAACATGTG ATAAAAACGACCCACACTGCATGGAGGAATCACACAATGTTCAaaggaga agaagaaatttGCCAGATGCTTATAATTCATCATCACACAAAAGTCATTG GAATGACCATGCTAGAAAGGTAtacttttctctcttttttcagCCTGTGT TTTAAATTAATAAGGGAATTAACATTTATTTCAGGAACTGATTTAGTTGT TTGCAATGATTCATATTCTCGTATACAATATGCAGAACCTTTTATGAGGC TATCAATATATGGGACAATTGCGGTTTAATAAAAAATAACGGTTTATGTA AATTCCTCCTTAATTTTCAGTTCTATTTTGTTTACTGATATTTTTCTCAT TCTGTCAGACAGGGAAATCATTTTGTGATATCTGGaatctttattttgac atgtcATTGAACTGAGCTTCCTCAAATTTATTATAAATTGGTTTAATCGT TTTATTAATCAATGTTTTATGAAACATTATTGAATTAGGTCAATTCAcag aacttttttcatattagTCCATTCAGTAACTCTCAATGTCACCGAAAAAA ATTCTGAATTATTAAACAACCTGAAATCTCTATAACTTTGTTGAATTATC TTTTgagcaaaaacaatttttaaatagttAATTATAATCAATCTTTACTT TTATAGNACAACCTGAAATCTCTATAACTTTGTTGAATTATCTTTTgagc aaaaacaatttttaaatagttAATTATAATCAATCTTTACTTTTATAGTC CCATTTCGTacgatttttttgcttccaagcTAATTTTCTTAACAGGTCTC TAAAACCCATTTAGACAAAATTGTTTGTTTAAAGAACTGAGTACCCTTTG GCATCTCTAAAGAGTACTTAAaaattaggaatttttttcaataacattGA GAACAGTAGTGACAGTTTTATAAGAGTCGCAAAATTCAGTCATCTCTTGG AGACAAGTTTTAAATCTTTCTCTCTCTATTATAAAAGTTGATATAATATC CTGAGAATATTCTATCAAGATCCTCGATTCTAcctatttcaaagttttca cgCCTAGACTATTTTGATGATAGAATTTTATCCACACGCTGACACTGATG GctcagtttgttttttttaatgtagcTTTTTTTATGAATCTTAACCAGTT GGTTTTCTTTTAATTCATAAATCCATATTAGTTCCGTTCTCTAACTGTCC CGACGGAAAGGCTCCGCTGTGTTTTATAAAACATAAAGACTTCTATAGAA TGAATATAGAACCGTTATAATTAAATATAGCTGAGAATCGGATACTCTAA ATGAGATTTCGCAATCATTAATCTTTAGTTATTATAAACCTGAGCTAGAA TTGTCTTCATAGAAAGGAATGCCACGCAGTCAATACAGATCTCTCTGAGG ATCATTTTGTTTTGGGGTGCAAAAAGACGGTCATATCTTTTTGCACACAT GCCGTTAAAAGGACCGTGAGAGAATTATAATTGCCTCGTCATTAACGTCA TTAAGATTAGAAGCACCTTAATTGAGTAATAGAATTGGCTTCTCTAGCTA GAATTTTGAATACGAGAATGCGTGGCTATAAACTTTTTATAAACTCTTAA GTGTTATTTACAAGATTAAAATTGCTGCAGCGTTTATGACCACGGCCTGA TACTGCAAGTcttaagtctttttttttttacaaaatgatCTGAGGTCTTT CATAATGTTGTCGCGTCTAAAAGGATTAGCATTAGAtttatcaaatcaaa attagaTCAGTATCGGTAAATTGATCAGTGTTTGACAGCTTTATTACAGA CAAGAATCAGCTTTTTTGCACTCCTCTCTAAGGTAGCCTCTTGCCATCAA ATTGTTACGTAAATGTCAAAAGCTATTTTGGCTTAACTTGATATCATTTC TGACATTACACAAACAGGAAAACAATTTCCTACGATTTTGGCATATAAGA TTAGGTGTCCAGAAAGGGGGTAATGTTTTTGCACATTGATGCTATATTCA ATTCAAACTATTATTAAAACTAATGTATTTTTGCAACCGTCCCTAAACGG AAAATAGCAAAACATTGTTCCTCAATGCATTATAAATCTTTTAATGAGCA TCTCCAAATTCCAATAAAACTCTGCAAATTTGATCAAGCACATACTagga ttatatatttttaattctGTAAAATGTAGCTTGTTTTCAGATCCCTTTGG AGCTACTAGACCTGTAGATTCAAACCATTATCGTCCGATTCCAGTGTTAA AAATGGTTGAAACAGTTGcgtctccgtaactcgaacacgcCTTGGGAACA CAATTCGTTCGAGAtaaggagatatttgagttaaagagactctaatGTAT AAAAATTCATCTTTAGCTGAACACACAACTGCgtacttatgaaaaaaaac taatcttctggatttaaaatttttctaactGAATTATGTAGGCAAGACTT GATAAATTCTGGCTTAAAGTTGTTTCAATCTTGCATAGATTTCAATCTGG ATTATATTTAGTCGCGTGCGTATAAAACCGCCATACTTAACTGATTTTAG ATATCAACCAACATgatcaaatttgatttgtcGCCTCCTTGAGGTCACGA ATGATTGTTGTGTCCAAAGAATAAGGTAGAACGTTGTTTCAATCAAGCTA AATccgtcaatttaaaaaaaaaggtcaACCAGATTTTGAAATAACTGACA GAAATACATCTGTAGGTGTTATCAAATAGTCACTAGTTTGGACGTTCCTT ATTATCTAGTGCACAAAGAACATAGGGTGCGAAACTTGACATATCTGAAA CACATTTACCAAGTATAATATGAgtaatttgacatttttttaattttgag aatAGCAAACTTTGGATTAATAGCATACTCTCGAGTttctaataaacgta cagtaaCGAAtaaagaggccccccagcggacccaaatttcacgcattcac gcaaaaaatttttcgcaattcacgcattcacgcaagtttttctcgaaatt cacgcaaacccaattttttgggaaatcggggagattttcggaaaaaatcg gggaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNaaaaaaagtatgacaaggctgtact cgagatattattcgaccggatctggtcatgcacttgagaaaaacttaact cagtagtgattttttcctgtagacctgactataaaacaccgtgtttagta gcgtcataagaagcccccaaatagaaagcgttacgtaatttttcaacttt aatcacatgccatcacgcaaaatatttgattcttctaacttgtcacgatc gtttagaaaaggtgaagcttctgcagttaacgtatcgcgatagtcagtga aaagatatgcgccgcaggcgaatttttgtacaaaaaattgcttaaacatt atcaaaaataggtcaaacaaactcgagtatgacaccgtgatgcttagctc aggggtaaggaggtttacgcagagaggaaacttttgcatttctgtcactc gcgtttggctaaaaatgctctctttaacaccattgaaaaagaatgtagtc taaattcgttagatgcaaggtacgatcgcttgatagcttgtaaaatgagg taaaagaatgaacatttgttgcgagcgaagcgatcaaaaaaaattaaaaa gaaaggttttaatcagggctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaataagtttctttt tatttgcaaaaacgtggtgaagtcatggccgcctcctgcccccagtgact ctggccctggccctggccctggattactcatcatgcataaccatggtttt atcttaaacaaacactttcaagggcgcaaattagagttatttaagattcg agggccaatacatgtttggcctgagcgaaaaaatctggaaatttaaggtg tctagattgctagaaagcgcatctaaatcatgaatcgtcTTATAgaatag agaatttgaaagttgctgattATTTTGTAcaccttcacctggcatccctt gaatttggaataggtgcgcacctttgtgaaaaggaaaaattcacacGTTC ACtcaaaaaacagggcagattcacgcattcacgcaatagaaatatggatt ttcacgttcacgcaagttttttcaattcacgcattcacgcaatagaaata tggattttcacgttcacgcaagttttttcaattcacgcattcacgcaatt ttttttcgattttcacgcattcacgcaaccaaaaaagccaattcacgcat tcacgcaattttttttcgattttcacgcattcacgcaaccaaaaaagccc attcacgcattcacgcaaaccgctgggggggccccaATAAACATATACAG GGTTGAAAATAGAGGCGTAAACCTAATTGAAGGGTCTTTTCCGGTTCGGT TAGGGGGTAAATAATGGTTATTCTGCTTTCATTTGACGAATAGATAAAAC CTCCATATTCAAAAGTATTTAGCCTTAGAAACACAAGTAGGCTTTTGAAA TTGAGgaaaatatttgttgaaattaataaacgtacatgtagtttattagg cacccgagagtaccCATTTAAGAATACAGTGGaatctctttaattcgaac ctctacaatTTAAATAACTACTCAAATCGGACAGGATTCATGGTtctttc agttaacaatgcctactctataactcgaaatttccttaactcgaacaaat ctgTGTTCccatgcgtgttcgagttatgctGACTCGCAAATgcaatattt tgataaataatgTTGCCCGAATATAATTTTTACTCCCTAAAACAAaagta atttaaatttttctcgaATGTCATTGAGtcatttattttcacttttgaaa CTCATAGTGTTTGAAGCCACGTGAACTACTTCGTCGCAATGAAATCAATT CAACCAAAACATCCATTACACGTGAAGATTTCGTCAAAATTTGTCCTTCC ATACTTCAACAAATCGAAAGCAAGAAATGTTTGCACCTTCATCGGACAAC GAAAGTCGTTCTCGGACACGATGATGCTCCGGACAGAAAATCAGGTATTT CACGAAGGAAAGAGTATTTCTTTCAACCACTCACCTTATAAAAGTAAAAT GTTTACATGGGAGCATGAATAAAATCTTCTTCCATGTCATGAGTATTTCA CAACTAAAAATATGATcaccaaaatatcaaaatgtatattttatgtttta agaattttaattCATAAAAATGATAAACCTATATCTCAAAACTAAGGCGT TGTTTTGCACGTACttcaggcgtacaaacttttgcgaacagaaactttcg cgaatatTACCCGAAAGCTTTtgctcgcgaaaatttgttcACCTAAAGTA TTTGCTAATTGGTTTTGTACACTATCATATCTCTTCTTTAGTTTGGTTGT ACGGTATGTTGTCCATCACAGTTATCAGTTTACTTTCACTTGCTGTCATT ACCATGATCCCATGTTTAAAGAAGTCCTTTTACCATAAAATCATGGCTTA TCTTATGGCACTGGCTGTTGGAACTCTGGCTGGTGATGCCATGCTCCATT TGATCCCTCATGTGAGTGACGAAAACTCGTGCTTCTATCATATTTTCTCC TCTGCTCTAAATTCTATATTATTGTCtaattttcatcatggatactTTTC CTTACTACTTTTAGTTGAAAGGCTGAATCTTTCTAAATCGTTTTATAATA CCCCTTTTTCATTACACCGGTGAAATTTAAAGAAGATTTCTATTTTCAAT GCCCATTGGTGAAGTCGGGATCAAGCTTCCTTCCTTCCTGCACTAAAAAT GTCTTAATTTCATCGCTTTCAAATCGTAAGATATTTCAGCTACTTTTGAC TTGTCGGTGAATTAGATTAGGGCACTActatcactgacctttatatatcc ctggaccaagctatatctgccatctttgatagaagttttttttgaattgg tacccgtaaagaagccattgcagtggNGTGATAGAAgtcttttttgaatt ggtacccgtaaagaagccattgtagtggtAAAAATTAACGGCGTCTAACg gtgctacatcatcaaaagtttttgagataaagtagatctagcgctttCGA TGCAtctacaccgctattgagtagtgccgccattaggggcATATAAggcc gggattgagaagcttggtccagggtatataaaggtcagtgactaCTACAG AGGTTTTTACTATACGAATCGTATTTTTGCAGGCTTTTGCAGAAGGTGCG AACTCAGCAGCGAACTTGGTGATCAACGATGAGCAGAAATTGAAACAACA TTATTCGCAAGTCTATCGTGCTTCTTTCGTTCTTCTTGGTATCTATATCT TTTTCTTAGTGGAACACCTCATGAAACTCAAAGTCATTTGTAAGGTAAGA CCAGCCACTTTCCATTACCATTATAATGACCTTTATCGTGTGCTTACACG CTTTATTTTTATTAAGAGCAGCTACATAAGATCGTAACAGGGAAATTTTG CAAAAACCTAATTTAACCTAAGTTTAGCCTGAAGGGCTTGTCGAGCCTAA AAATCTCGATAAATTAAGAGTAGCTGAGGTTGGGACAAAATTGACTGGCT TTTATAAGGAGTGTGTTTTTTACAGTATGTCTAAAAGACAATTTTTATGG CGGTTAAAAGACTTTTCCATCTTTTCAACATTCAAGTCGAAGAACCAGGA ACTTTACTGAACTCTGTTATGAATTATATTGGCTTTCTTTTATCAGATgc catttttattatttcatttttgtcAGGGTAATCATGGCCACAGCCATGGT GGAGGAGGTCACACGGCAGTGCCAGTAAATGATGAAGAACGGTCGAGTAG TCCACCTGCCAGTCCTGGTGCTAATGATTTggatgacgatgatgatgaaa AAGCTATCGTTCAGTTTgataaagaagatgaaaaagttgctCTAAAGGTA TAATCTAGTAAAACTTCATACAAGAAGAACTTTATTTTGTACGAGATAAA AAATAGCCGTCATTTATTGCAATTTGACGTAACTCTACGTGACGACATAA GAAAATACTTTTCACTCTAGATAGTCTTTAGATTTTGAAATCTTcacttt tcaaatttgtaaaagcCCACTTTCAAAAGCAGTGTTAGACAAATAAGATC GAAATTGTTAATACATTATATCCTACCCTTTTCCAAGAACAATGGCGCAG CTTCACCCACATTGAGTTGTCAATCCAATTTACACTCAAACGGTGACGGG GGCAACAACACTGTATCAGAAGGAGGCCATTACCATAGCGACGATCGACA CCATCATCATCACCATGGTGAGAAAAACGTAACCAAGGATACCAAAATCA CCAGCCTCGCTTGGATGGTCATCGTTGGAGATggttttcataattttacg gatGGTCTAGCTGTGGGTGTGGCTTATTCTGCATCTCTCTCAAGTGGACT GAGCACGACCATTGCCGTTTTTTGTCATGAACTTCCACATGAATTGGGTA AGAGGTTTTTTTCTTAGGCTAGACTATATTATAGatataaatattatttt atgaatTCGCTCAACGGCTCAATGGTTGTTCGATCAGAATATTGTATTCT TAAGCTTTAGACGAGAATATTACTTCCACCAAAGCGACAGGTGTTGTCTA AAAGGTCTTGATGTTATAAAATAAGTAAATCATACAAGCCACTTTATAGC GTATGTAAACAAAGTCAGCTTTGTAAAACTGTAGGATGCCTGGGGCATTT TCACTTTCAATATTTCTTCAAAAACGGGCTTTTAGATTGTGTCACCCTTC CCAATAAATTCATAATACAGGCTCACCTGTCGAATTGATCGAGTTTGTTT GTATATCGGACATGTACGGAGAGACAAATTTCTCCGAGCTAAAGAGTCTA CATTATAAGGGTTCATCAACTGGATAGCTTCGATTCTAACAGGTTCAAGT TATCGAGACTCTGTTACTCTTATTCTTTCTCACCAGGTGATTTTGCCATT CTAATATCAAACGGGATGTCAATCAAACAAGCCATCATATACAACCTTGT GTCTGCCATATTGGCTTATCTTGGATTAATCGCTGGTATCCTGTTGGGAG GATCCGAAATGGGACGTCATTTTATTCTCTCCATAACGGCTGGTCTTTTT CTTTACGTCTCCTTAGCTGACATGGTAAgttttgaatatgttttaaataa agaaaagtgACCTTCATTACTCGTTCAACTTTTCCAATAGAACGAATCCT CTAGATTTGTGGGTTATCCTTCGATAAGATCTTTTAAATAGTCTTGTACA CTCTAAAGAACTGGCTATGCGTCTTATTGAGACCTCTTACAATGCAAAAT ACTCAATACGACTATCGCTGACCAACACCAACTGCTCTAGAGCAGCGAAT TAGATATCGCTTATTGATGATTGTAATTTGatgtttgaatttgttttatc TATAGTTACCAGAGCTGAGCCATCAAGAAGTACCAAATGCTTCAAAATTC TCAGCCTTCGTTTGCCAACATCTTGGCATTCTCAGTGGTTTTGCTATCAT GTTATTCATTTCATTATACGAACATGCTATATAATGAAGAAATCGCGAAA GCTAGATTCAAATTATCTTGAAAATCGGATTACCGGAATGAATCCGATAA CGATGAGATGGAAGATCGGCAGACTGATTTTCGGTTCGATTGAGAAGAGA TTCCCTTCTAATACATACATGATGCACTAGGGTCAAAGAATGTGCTTGAA CGAAAGATAATGGAAGAAGGAGGTGGATTTCAGCTTGAACTCTGATGACA TTATGACATTTGCtgctttttgaaaagtgaaactgattttggaatCTGAG CGAGTAAATCTTTAGTTTAAAGCCTGAAAGGCTaaagtagaatctctaac ccttagaagttcctttgtttttgaggactgcattttttggaATCTAGCGA Cagatccggcgtttgtgtaagagcaacgcgcgggcgttctggatgggaga taagtgacttcatttcccatccaggagtctcgagtctagcccttagGGCG TGGAAGTCAATGAgcgtacagttgactctcttaCTCGATCTTCAAGCCCT CTTCAAGGGACCGAGAATTTTTCTCGAATAATGGCAATATTCGGATTACG GAGAGCATTTAATACAAGCGAGGAAACCAATGCTTTggatcgaattacag aaagattcgagttAAGCGGGTTCGATAATTAGAGAGGGTTTGACTGTATA TCTTTTTTTTCGTTAAGAGTAGAACTTTTATTTATAGAAGCAGATAATCT TTTTTAAAGACAACagaatatttgttttgttttgttttacaaTATATAGA AAAGGGATATATCGAGATGGAGATATTTAACCTGCAGAAAAGAAACAATC CTATCGCGAAATGAAATTCACACGGAAATATCTATATACTCAAATTAATT NA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000448TCONS_00000448Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000448-proteinTCONS_00000448-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:899013..909064 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLC39A8zinc transporter ZIP8 isoform b precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.8 4.12 3.19 3.21 8.12 6.21 10.09 10.21 13.2 10.32 11.65 14.5 19.91 17.88 19.65 17.83 29.06 24.9 22.67 28.46 31.89 31.37 20.63 27.49 23.78 24.25 12.78 9.24 11.83 11.3