TCONS_00000448-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00000448-protein
Unique Name	TCONS_00000448-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	547

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00000448-protein ID=TCONS_00000448-protein|Name=TCONS_00000448-protein|organism=Clytia hemisphaerica|type=polypeptide|length=547bp
MFFLKLAIGICCVVVVLSSDCLKTVINSKGTKYFLDEIFQKYATNDKMTI
TEFSTFIKKFDIGEIKITCDKNDPHCMEESHNVQRRRRNLPDAYNSSSHK
SHWNDHARKCLKPRELLRRNEINSTKTSITREDFVKICPSILQQIESKKC
LHLHRTTKVVLGHDDAPDRKSVWLYGMLSITVISLLSLAVITMIPCLKKS
FYHKIMAYLMALAVGTLAGDAMLHLIPHAFAEGANSAANLVINDEQKLKQ
HYSQVYRASFVLLGIYIFFLVEHLMKLKVICKGNHGHSHGGGGHTAVPVN
DEERSSSPPASPGANDLDDDDDEKAIVQFDKEDEKVALKNNGAASPTLSC
QSNLHSNGDGGNNTVSEGGHYHSDDRHHHHHHGEKNVTKDTKITSLAWMV
IVGDGFHNFTDGLAVGVAYSASLSSGLSTTIAVFCHELPHELGDFAILIS
NGMSIKQAIIYNLVSAILAYLGLIAGILLGGSEMGRHFILSITAGLFLYV
SLADMLPELSHQEVPNASKFSAFVCQHLGILSGFAIMLFISLYEHAI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000285	XLOC_000285	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00000448	TCONS_00000448	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003689	ZIP

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0046873	metal ion transmembrane transporter activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0046873	metal ion transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003689	Zinc/iron permease	PFAM	PF02535	Zip	coord: 171..540 e-value: 1.1E-74 score: 251.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..321
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..387

Blast

[Close]

BLAST of TCONS_00000448-protein vs. Swiss-Prot (Human)
Match: S39AA (Zinc transporter ZIP10 OS=Homo sapiens GN=SLC39A10 PE=1 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 2.919e-80
Identity = 184/529 (34.78%), Postives = 281/529 (53.12%), Query Frame = 0

Query:   86 RRRNLPDAYNSS--SHKSHWN--DHARKCLKPRELLRRNEINSTKTSITREDFVKICPSILQQIESKKCL-HLHR-------TTKVVLGHDDAPDRKSVWLYGMLSITVISLLSLAVITMIPCLKKSFYHKIMAYLMALAVGTLAGDAMLHLIPHA------FAEGANSAANLVINDEQKLKQHYSQVYRASFVLLGIYIFFLVEHLMKL-----------KVICKGNHGHSHGGGGHTAVPVNDEERSSSPPASPGANDLDDDDDEKAIVQFDK--EDEKVALKNNGAASPT--LSCQSNL---HSNGDGGNNTVSEGGHYHSDDRHHHHHHGEKNVT--------------------------KDTKITSLAWMVIVGDGFHNFTDGLAVGVAYSASLSSGLSTTIAVFCHELPHELGDFAILISNGMSIKQAIIYNLVSAILAYLGLIAGILLGGSEMG-RHFILSITAGLFLYVSLADMLPELSHQEVPNAS----KFSAFVCQHLGILSGFAIMLFISLYEHAI 547
            R+R  P   N++  S +   N  DH  +CL   +LL+    +   + I+ + F  +CP++L QI+S+ C+ H  +         K ++  D+A    S W+ G++SITVISLLSL  + ++P + +  +  ++ +L+ALAVGT++GDA+LHL+PH+        + A+   +   ++  K  + Y  V +    L GIY+ F++EH +++           K   K N   S  G   +   +N+   S      P A   D      ++V  D+  E E   L+    + P   L  +      HS+ DG +       H H      H+HHGE                              K+T I ++AWMVI+GDG HNF+DGLA+G A+SA L+ G+ST+IAVFCHELPHELGDFA+L+  GM++KQAI+YNL+SA++AY+G++ G  +G        +I ++TAG+FLYV+L DMLPE+ H +  N          F+ Q+LG+L GFAIML I+LYE  I
Sbjct:  309 RKREAPHVKNNAIISLRKDLNEDDHHHECLNVTQLLKYYG-HGANSPISTDLFTYLCPALLYQIDSRLCIEHFDKLLVEDINKDKNLVPEDEANIGASAWICGIISITVISLLSLLGVILVPIINQGCFKFLLTFLVALAVGTMSGDALLHLLPHSQGGHDHSHQHAHGHGHSHGHESNKFLEEYDAVLKGLVALGGIYLLFIIEHCIRMFKHYKQQRGKQKWFMKQNTEESTIGRKLSDHKLNNTPDSDWLQLKPLAGTDD------SVVSEDRLNETELTDLEGQQESPPKNYLCIEEEKIIDHSHSDGLHTI-----HEHDLHAAAHNHHGENKTVLRKHNHQWHHKHSHHSHGPCHSGSDLKETGIANIAWMVIMGDGIHNFSDGLAIGAAFSAGLTGGISTSIAVFCHELPHELGDFAVLLKAGMTVKQAIVYNLLSAMMAYIGMLIGTAVGQYANNITLWIFAVTAGMFLYVALVDMLPEMLHGDGDNEEHGFCPVGQFILQNLGLLFGFAIMLVIALYEDKI 825

The following BLAST results are available for this feature:

BLAST of TCONS_00000448-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00000448-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S39AA	2.919e-80	34.78	Zinc transporter ZIP10 OS=Homo sapiens GN=SLC39A10...	[more]

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TCONS_00000448-protein (polypeptide) - C. hemisphaerica