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XLOC_000280 (gene) - C. hemisphaerica

Overview
NameXLOC_000280
Unique NameXLOC_000280
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:586753..598200+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000280 ID=XLOC_000280|Name=XLOC_000280|organism=Clytia hemisphaerica|type=gene|length=11448bp|location=Sequence derived from alignment at sc0000002:586753..598200+ (Clytia hemisphaerica)
aaaaaatgttataattatAATGGATGGAAAAAGGACTTGGCCTGATGTGA TTGGGATGAGCAAAAATTAACCTTTTGACCTTGTATTACCATTTGAGATT GAAGATCCTTAATGTATTGAATTGGTTTTGAAGTAATGGATATGAAAACT TCATATTTTTCAGTAAGTTTAACTTTATAttatagaaaattattttagag AGTCAAAAGGTCTTATGAAATGGTCTAATATTTTACCGTAATTaactatt tttcaatttattgagTTTACAGAGGTATTGAATAGTTTAACCTAGTCTTA CTTTTCACATAATTTTGTTAATAGTTTAGTATTAGTCTAggtcaatttaa tttgttgttttacgggccaagctacccaaaaagagGGGTcagtcggtcgg cgaaaaaataaaaataaaagtagaatttcacctataaaatatcctaaaaa gcaacaaaaactgctacatcttgacaaaaatgcgaaatagaaaataaaaa ggcaCGAAAAggtcgaattcatggataaaatgaaaaactgaacataaatt tttcaatttttattttcatttcgatttttggaatttcagggtcggtcggg tccgtaaaacaactaatcaaattgttCTCGCCTGATAGACTTTCACCAGT TTTAGTAGTTTTAGTACCGACCACTGATATAGAACCTCTCTACCTCTTAT TGTTTACATTTGAATTGTTGTTTGGTTTATTTTTTACGAAAGGAAAAAGT AAGATGGTTTTTGGTTTGAATTCTAATTCATAAGCTACATGTCACCATAA AAGCTGTTTACTAAAAGGAAGGTCCTTTGAGAATTTAGACTATAAAAGCA ATAGAGAAAATGAGAAATCTATTTTGAATTATTTCCAACTTTTATCAGAA ATATAACTTACTGGAGTTACATAGAATTGAGAGACAAATTAATGTAGGGG AGACTcccttaacttttttttctaatcttgttTTTTATAAACCTGTGCCT TGAGATTCTCGGtttgctttttggacctaccccggtgggctgtaggtcct ataaattaacctttgtccgtccgtccgttagttaccagcttttctcgaga ttggctcattagttttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtagcaatgcccacc atcaagcatgtttcaattttcaataaaattgatttttgaagccggaactt tctaaaaatcgccggaacagcccattttcgccggaaaactgttatttctt gaatttcttgagctgtactttatattttttcatgaaattgtgcacactga tgcaaaatgtcgatacctaaattgtgacggagcccgattttcgaaaaaaa ttcaattccggccgaaaatggcggaaatatgccggaaaaactggtttttc ggcattttctcgagatttcatcattaactttttcagattttttgctcaaa gatgcgtattaacaatgcccaaaacatggcctagtccgattcttgagaaa aaatattttccggccgaaaatgccggaaatatgccggaaatcgccgtttt tctggattttcattggacttttcccatataattggttattttttcattct aaaacattatcaatagcaatgcccaccatcaagcatgtttcaatttttaa taaaattgatttttgaagccgggttttctaaaaatcgccggaacagccca TAATCGCCGGAAtaacaggttttttttaatttctcgagctgtaccttata ttttttcatgaaattttgcacactggtgCGAAATggtaatacctaaaatg tgacggagcctgattattgagaaaaaaaactttccggccaaaaatgccgg aaatacgccggaaaaaatagttttttggcatttcctcgagatttcattat cagttttttctgaatttttgcttaaagacgTAAATTAGACGTCTAAAATA TGACCGAGTCCGGCGGTTTTAGAGNTAATTCAATTCctgctgaaaatgcc ggaaatatgctggaaaaactgtttttttggcattttctcgagattttatc ataagtttttttctgactttttgttcaaagatgcgtattaacaatgccca aaacatggccgaatccgatttttgagaaaatcttttttccggtggaaaat gcctgaaatatgctggaaatcgccgtttttctagattttcattggacttt ttcctttttccgttgtttttttcattcaaaaacattattaatagcaatgc ccaccatcaagcatgtttcatttttcaatgaaaaatttatttttgaagcc ggaactattttaaaagtcgccggaacaacctattttcgccggaaagacag tatttcttgaatttctcgagctgtactttaNNagccgaaaatgccggaaa tatgtcggaaaaatcggttttttgatattttctcgaattttcatttctag ttttttccgatttttttgcagaaagatgcgtctttgcaatgctaaaaaca tggccgagttcgatttttgagaaaaaagtttttccggttgaaaatgccgg aaatcaccgtttagtttacttatatttctatgcttttcacacaaaaacat tatccataacaatgctcaccatcaagcatgattcaattgtcaataaaact gatttttgcgaccagaacttcctatttattatttccctacaaccctacaa cccttccctctccccccatcaacaatcaatgatgaatttattgtgttgtg ttttttcgctaaacgctatattttctgactgatttttttcatttttcttt tcgcattgctatctaacttttatCATCAGGtaaggtaggtccattcagca tattgcttgttGTTCTCGAATATGCAATATTTAGCGTCTGATTATCTAAC ATGTtctattgggccattccattttataaccatacaggggtggatgaaca tttccaggggatagCCTGAGAACAATTTCCAAGAGGTTTAAATAAGTGTT TTTTCGTGTTTCtagggtaaaaagttattcttaaactttccagggggtaa acgaCAAATATTAGTTCGCCCAACCTCACTTTAAgtcatgaaaataattt tttccaggctcttttttgcaaattttgctattttccagggggtataaaCA CATTTCAAAGAAATGcgttttgactttgatttctttttaaaatactgAAG GATTTGTGAACATAAATTGCATTTGTCTAATCCAGGTCACGAATGTATGA ATATTGACATTCTAGTTCAATTGTTATTTCTTTCCTTCTTAGAAATATCT AAAAACTACCTGGGTGATCTTTAGTTCTTTTCAACAAGATATCAAACGCT CACCGTTCACCGTCTTGTGACGTTTTACTTTCATATATATTTAGTGAAGT ATCAAATTATCCTGAGGGTAATTCCTTGATAATCTATGTTATTAGTGTTT GTAGTATATGTTCATAAGTGCACTTGTGATCTTTTCaaataaaggaaaaa taacataaaaaatCCCTTGATAATGACCTGGTTCGTTTTTTAAAGTTCAA CTTGTTACATCacacttttttcaaatctttcacGGGGGATTTCCCGAGGG TTTATTAGGCCGTATTGGGAGAAAAAAAGATTGGAAAGTTAGGATATTGA GGGAAAATGTGCAAAGGATCTTGTAACTGTCATATATTTATCTCTTATCT GTACGAAACAATATTAAAAGGTTGGGACCAAATTTATTAAGACTAAATCG agaattttgacctttttacGAAACTCAATGTATGTTTTTTTNTATGTATC TCTTATCTGTATGAATAATAATATCTGTATAAAGAGGGTGGGACCAAATT TATTAAGACTAAATTTCGAGAGTGAGAGACTAAACCTACCCAAAAAACGC ATAGGCCTCATAGCTAACTATGAGGATCACAGCGCATAAATTAACATGTA CTACAAACACTACTAACATAGATTATCCAGGAATTACCCTCAGAATAATT TGATACTTCGCTAAATATATGGTTGATATCTTGTTCAAAAGAACCAAAGA TCACCCAGGTACTTTTTAAATGTCTTCAAGGGATAAACGAAATGAACAGT GGAGCTAGAGTGTCAATTTTGATCCATTCGTGCCTTGCATTAGAAAATCG CGATTTATGTTCACAAATCTTTCAgcatttttgataaaagttgacgaaaa tttcgagaattttaatgtttttacaaaactcaaaatgtttattttttttc aaatttattttgtctGAGAAAGTTTGAATGAAATGATCTTTTCAGCGATT TtttcatgtttaaaaaaatctttaacgaACGTACGTGTCTAATTGCTAAA GTGTTTCTAAGTTCCCTTCTCGATCTAGAATTCCCagaaaaattgatgag taaTCACAATTTTATTCCCTGAATTAGTCGAATTAGGATATAAGTGTCAA TACTGAGACGTAAAACCTTCAAATTGAATATACTGAGAAAGGAAGACAAA CGTTAGAAGGACAAATtcatttgttgatttttgagAGGGaacatttaatt tgaaaaaaatacgtaagtaacttttgatttttgacaGGGTTATACAGAAT CATGAAATCGTTAGgctctgctcatcctctagcgaaagaagtttcttata ggaagtatatctatagaggtctgcgattcagactatgaAATCGTGtgaaa ttttcacatgaaaaatctcatctcattgggctcttccagaaaatgtccgt acatgggggtggaggatatattgtccgggggtagcgaaaaatcatcaaaa tttgccttgtccggggggtaaatttgctctgtctgGAGGTAATTTGgctt gtccggggggccaaaagtcactttgtccggggggtaaatcactgaaaatt gttatatcctccacctcccatattcaaattttttttctggaaaatcccat tttaagaaagattttatttatttagtatTGTCGATGCGTTAAAGATATAC TCGAATAGATAGGATTTCAATCTtattgaagaaaaatttctcaCTTTGCC AAAATTCACTGTCTCATTGTAATTGACCTAGAAGATCTTTGTCGgaggaa aatcttttttcacgATAAGATGTTTATCAATCGTGATGAAACCGTACTTG TCCAGGGTtaaatcacaaaaataaatctcgtacaattttttcattcaagA AAAAAccagaaatcaaaatcaaaatctcgtGCATCTAATTTGATTGATTT AACGCTCGGTATTACCTATGTATTTATGCTTCTAAAAGCATTCCCCACCA ATAAAAAAGTCCCCAATATTTTTCAGCGTAGGGATTTTTCGTATTGACCA GAAACCATTTTTCCGGAAATCACCACGATTGTCCATTTCGATTTTCCCAG TATACACGTGTGCGTGCTGCAAAATTTGATGACGAATCATGACCTATAAA AAAGCGTTTGAAAAGTTTCTAACAGATTAAATACCTCCTATGTATTGAGA GGAAAGGAACTAAGCGCTTATAAGACAGTGAAGATTTGCAACTTTAGAAT AAACAACAAAGTAACGTTTCAAAGTAAGTTCACAAAAATGCTTGATAGTT TAGTTTGATTTTAACAAGAGGCTTGAAAATTAAAGTCGTAGACAGCAAAA CTTTGTTAAATGACAATAGTATCCaggtttacatttttttgaatagaaac aaagtttttaaaattgtaggGAAAAAATCTAGCTTCCCTCTTTCTTGTTT CAGGATTCCTACCAACTACCTCTAACAACACCGAAAGACACAGCAGCAGT GACAGACCAATACTATCAGAATTAACAACTATCAAACCAAACACAATGCC AGAACTACAACATCAACAATCTTTAGAAGCAGTAACAGTTACAACACCTA TTACCAATCAAACTTCGCCACCACAACCAATAACAACAAACAACCAGCAT TCTGAACATGGGATCCAATTTTGTTGGTTTATCTTCAGTCTTCCTCTTGT CAGCTCTTTCCTCTCATTCATTGCTTGTTTAATAGCATACAGAGTGGGTG TAGATGAGAAACGCCTACAACCTTTACCTTTCATCCCATTTATCAGTGAC ATCGGCGACGTCAAACCAGGATCTAGCTTCTTCACATTCTTTCTAATCCT TAGCAGTCTGGTGACTCTCATAATTATCACAGTCAGGTATTACCAAGTAG CTTCCAAAGCTGAAACTGACAAGTCTAGAAACAGCTCCCCAACAGAATTA AGAAGCAACAGGGATAACCCGTTAGAAGAAGCAAGAACCAAACGATCCAT ACAACGATTGAATACAGCAGCTTTGGTATCAAGTTGTATTTTCCTGGTTT GTAAAATTGGTGTGTCATCTTTTCAGTTGAATaactataaaaaaattcat cttggttttgcttgcttttatttttttggtgCAGCCCTTTATACTGTTTT TCAAGTTTGTATCACTTTCAAGATGATTGGTGGTTTAAACGGACTGAAAA AACTCCTTACAGGGGACATGTCTTCGAAGTGTCAAGGCTCTGTCttttta tcaagagttatctGTTCTTTGGCACttatcatcaattttttcattgTTGG TGTTTTTGTTACTGTACCCTCATTGAAAGTTCATAATCGTGGTGGAGCCA ATGTGGGTCAAAGTGCTGAATGGGCTTTCGctggattcaaattatttttc ttctcGACATTTTCGTATGAATTCTGGAAAATTCGTTTCACGTTTCTAAT GAAGTTTGATGAGATTGAGAAAACGAAAACCGAAAGTTTCCCGATCAAAA ATTGTGACACTACCGATGGGCTGCCATCGCAAGTATCATACAGCAAACTG CAATGATCGTGACATTTGTATTGTATAGGCTTAACTCGCCATTTTGATTA AGTCTGATATGTGATACATAAAGTTCTTTCATAAAGATTTGCGAGTTGAA GAGCTAGATGTCAATGAACGTTAAAAATTAAATAACTTTAGACTGAAAAT TTGACTTCTACGATTTTAGTCCCTTGTAGAACGCAAACTGTGATTCAAAA AATTCACCTTGTATCTTGTATTTATAGAGACGACGAAGGTTGGGGGCCAT CTTGCATAAGTTCATTTTTAAtttatcaagatttttaaacaaatttgaaT ATCAGATCAGAGTTTTAATAGTGATCTAAATTAAATAATGTTATTGTAAA TACGTTCCTTGATTTCATTTAAGTATCAAAAGTTTTACctatttttacag ttttttttacaaaatgatatattttatgttttccaACTCCATGTccaata tatttatttttcttgatttttaaagtaaagaaatttttaaagtacagtat ttttgaattttgagtgAAATTCAGCAGAGACAATATCGAAGACATTTGCA ccatcagatggtttgagatatttggccttAGTACCTTCTACGGTCCTGAG TAAAACCTCCAAGTATTTTGGCCTAACTATCGAGATAACACAATTTGAAA TTACTGAAAATGAGTTCTTACACGGTTAAACTTTCGTTGTAATTCTtact aaaagtaaaaatatctcaaaccatctgattatccctttaaatggTAGGCG TGATACAATTTTGACCGCTCTTTGGTGACCACTTCTTGATAACCTTTCTC GGAATCCTAAAAGGGTGAATTAAAGGAACTGGGTTCGAGTTTTTAAGAGA GGTACTATTCAACAGTTGTCAATTCTAATTCCCCCCCTCAGAGCAATCTT TCAATTTCGTAATTCTGTAACTTTCAGACGTTaaaagttaagtttattct tttAATGTAAatagtttttgtttattttatacgtgacaaaacaaacaaaa gaagTAAAAACGTTTTCGACTGTTCAAAAATGACACACGCGAGTTATCTT TATTCCCTACGTATTTTTCCTCTAAAATGAAACGTGATCTTTAGGCCTCA GGCCTTCTAGAAAACTCCTAATGAACTCTTGAAAGAAAACCCATTAATTT AAGTCTCGCCTAATTGAAATTACAAAGGTCTATCTAAAACCTGGTTTATC CCAGGTGCTATCGACAGTCGATGTGTGTTTTGATCTAGAATTTAGAGGAC CTTTTgctttaaaaacaattttacacccctgtctcacagccccgaccGAG CTATTttcctcaatggggataaaaattctaaattttccagtggggctggg gtcccagcgggtctgtgagacaggggtgtagtaTATTTTGATTAATACAT AAGTTTTGACCATGAGTCAGAACTCTTTGAGACAAATGCTCCCTCTAAAG ACACGAAAGGTTAATGTCAGACGCACATTAAAGAGAAGTAATCCAATACT TCTCAAATACTGTACACGTTTgcttttcataagaacatccaaaatttTTG AAGCCTTGGGATGTTcccaactttttgagttttaagcctaaaaatgttct taacatgttcttattttcaccattttgtgagtatttttgcctattttcat aagaaattggatgttttagagtccacaaagccttaaaatgttcttaactt gttcttaataatttggtcatcgaagccttatgttcttacatagtttgttc ctATAAACAACCTATACTTTTCAAATAATGTAGATTCGCATTATTGACAC ATATAAATAGATGATTGACACAAGAGGTATTCAGATTTCCTTTTACAGAA TTCTTTTACTGATGTGATGTTGGCTTTCGAGAATCTCTTGTGTCAAGTTT CGTCTACCATCACTTTAAAAGTTTTCGGTATCTAAGTCTTGTATGGTCTT GTAATATTTAAACTTTCATGTCTTTCGTGATTGGGGTTGCCAGTTTAAAG CTGTGGGACCACACACCCTGGATTTTATGGGGCAACATATGGGCAACATA TATAACTTTACAGTTATACacaaattttacacttttttggatttttgatg ttttttctaCTAAAAGGTTGTAACAGTTGGTAACAGGTCTGAGACAGGTG TTACacccttgtttttttttaaatggtggTTCtatcatttcatcatggat atcaTTAACcttgtcaaatatttttatattatgcgGAGTATCAGAATCCG CTCGGAGCATTAAAAGCTTCAAAACTTAGTGTAATAAACTTGAATcttga ttttttaacctttcagtGAATGGAAGACTTCAAAAACTgagataaaacaa aagaaatcgaaCTTCGTGAtaacaagaaaaacaaaatggctgattcGAAA ATACAAGCCGAAGAAGAAACAAGAACAACATTAAATGCACCAAATCATGC CAACAACAGAAAAAGCTACCAAATCAATCTGCGTTGGATTATCTTCAGCT TACCTATCATCAGCTCTCTCTGCTCCTTCATAGCTTGTCTGATGGCGTAC ATTATCGGCGTGAATAGTGGAACATTGAAACCGTTACCTTTTATACCTTA CATCAGCGATACTGGAGATTTTAAACCGAATTCAAGTATATTTACTCTTT TCTTGATTTTAAGCAGCTTNAGGAGACTTTAAACCGAATTCAAGTATATT TACTCTATTCTTGATTTTAAGCAGCTTTGCAACGCTGGTTATTGCTATAG TACGTTTTTACCAAATTGCAGCCGAAGCTAGATGCTCTATAGCGAACAGA GCAGCTTTAGTATCTGCATTTCTATTTTTGCTTGGTAAAATCGTTGTTTC GTCGTTTCAACTTTCATCAAATATTTTCGTCCATTTTGCAGCCGCTGGGT TATATTTCCTTGGTGCAACGATCTACACGTTATTACAATGTTACATTACT TATCGATTCCTTGGTGATTCAATTAATAAAGAAAGATTCGTCAAAGATTC TACTTGGAGACGAGGATGTATTGTTTATTTGATTCGTGTAGTGTGTTGTG TCGGTCTAGTAATCAATTTAATCATATTTGGCGTATTTGCAACAATCCCT TCTTTAGAGATTCATAACAGAGGTGGAGCCAATGTGGCGCAAGCTACAGA ATGGGCGTTGGCAGCATTTAAAATTATATTCCTATCAACATTCACTTATG ACTTCTGGAACATCGAGTTCAAATTTGGAATGGAATTCAAAACAATCCAA CCAAAAGATTTTCCTTCACCAGAAACTCAAGTTTCAATAGATATCGAGGA CAATATTAGACTTGCTAGATATACAAGATTTGATTCGAAGGAGCcaaata aagtgaaaattgAGTTCCATACATGAATAAAACATGACGTTAAATTTCAA TCGAGCTAAAAACCGTAATTCACGAAGCCAAATTGAACATTGTTTTTCCA AAAAGATATGCCTTAATCTCATTTACCATGGTTGTAGTCTAAATAATCGA TTGAAAGTGAAATATAGCTACAATCCTTCGCAGGGGGATTtcttgtctca aatattttgtccatgattgtacatATAATTCAAAGTttagatttttaagg aaataaaaaataatatttcaggACACGACTaacaatatttttgatttata taatttgaaattattttcaaaaagattacGGTTATCCCTTCGTGTATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000432TCONS_00000432Clytia hemisphaericatranscript
TCONS_00000433TCONS_00000433Clytia hemisphaericatranscript
TCONS_00000434TCONS_00000434Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000433-proteinTCONS_00000433-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:586753..598200 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.05 1.88 0.71 0.4 1.91 1.14 2.99 2.68 2.44 10.7 1.42 1.84 6.65 5.98 4.19 3.32 5.4 6.19 7.15 8.42 2.23 1.77 5.77 7.73 12.72 11.9 12.77 13 5.63 5.54