XLOC_000139 (gene) - C. hemisphaerica

Overview
NameXLOC_000139
Unique NameXLOC_000139
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:2445250..2452430-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000139 ID=XLOC_000139|Name=XLOC_000139|organism=Clytia hemisphaerica|type=gene|length=7181bp|location=Sequence derived from alignment at sc0000001:2445250..2452430- (Clytia hemisphaerica)
CAGAAAATAGAAAACTGATGTTTATATAAAATGGTTGTGATGGCGGTGAA CAATCGGTATTGTAGTGACTGTTTAGAATCAGGGGAATTTCTACCCCTGA GACTTGTCATGATGAATTTGGATAGCGGTCTTTGGATGTGTCCCAAAGAT GATGTAAGATTATATTAATTTTTCTCAATTCGGTATTGTAGTGACTGTTT AGAATCAGGGGAATTTTTACCCCTGAGACTTGTTATGATGAATTTGGATA GCAGTCTTTGGATGTGTCAGAAAGAGAATGTAAGATTATCTTAATTTTTC TCGATTCCTTAATTTAGGTGTTATGTCTATACCCTTTTCAGTTTGCATGA TGCACCAATAAAATAATTGATATAATCCTAGTATGTTGGTATACCTGCCA TTATTTTTGAGAGTGTGAATAATTTGTGAATTTTTTTTTTCATTTCAGTG TACATTTCCCTTATCTTCTCCATCCATGCAGTTATACATGGAAGAAGATT TGACCACTGAACGTGTTTTGCTGTTGACAGGAAACAAAAGTAAACAATTA GAGGTTAGTAGAATTTGATTGAAACAAAAGTCATTCAAAAACCAAAAAAA ACAAAGATAAAAGTAAAAAATTTGTAGTGTCATTATGTCGTATCAGACAT CACAACAATTCAAACACAGCTAAAATAGAACAAAAACGGAACAAAAACAA AGACTCAAAAAATCTGCCTTTCATTTAAGATTCTTTAAGAAATTAGTTTT AGTTTTTTGAGCGATGACTCTTTTGATCGTTTTGGTGTCCCAGACCTTAC ATTATCTTTTTTTATTTTCCAGAGACCACCAACTCCAGACTCACTAGTAG CAAGTATTTCATCAAACAAACAAAGTGACATGTTACAACAAACACAATAT GCAGTAAGTACTACTTCATCAAGTGGAAGTCGAAAACGTAAACATTCAGA TGGTGGCTCATCAAGCAGATCAACCAAAACAAATAGTTTTCGCAGTGTCA GCAATTCAAACATTACAGATCCAATATCGTCAGATTCTTCGAGCTTGATG GCTAACAAAAAGTATCCTTCAGTACCTCTATGGGAAAATGAAGAACTGCT GTGCTGGCTGGATTCAATGCTTGCACTCATAGTCTTGAACCAAACTTTAC AGAATTATCCTGAAGAGTCCAAAGGTACCCTAAATAAATTACTCAGCGAA TACAAACATAATACTGATATTTACAATGTGACAAAAGACTATGAAACAAT AAGAGCAAGCATGCACACTTTACGGAAATCGACACTCAACTTCATTCAAC CAAAGATGTTATCCAGCTTCACCGAGGAGGATTCTCCTCTCTTGTCTCTA CAGCTTTTAATGAAAACCAATGCTGAGCTTTATGAAGATTGCGAAGTGGA ATACTCGAGTAAATTCACTTGTAACCAATGTCAATTCGAAAAAACTGATG GGTAAGAAATCATCCCTACGTCTTCTTATTTTTGCTAAAATCTTTTATTT GAGCACTGGTCGATTGTATAGGTTTAATCTGGGTATTGTGGTTTAAACAT AATTCGATGAATATTCAGTTTTGATGGTTATTATTTCTTTTTGATTTTTT ACTAGGTTCAAGAAAACCATACTGACTCTCCCAGAAGGATATCCAGATTT GAATTTCGTAGAGAATTTATACTACAAAAGGAATTGTTACAAATGCAATG CACCAGAGCAAAAGAACGTTTTCTATATTGAGAAGTAAGTACTTACTTTT CATCAAAGTTATTCACAAATCAAACCTCTAATAATAGCTAACGCGTATAC TCATGTGACAGACCAGGGCAGACAGTGAAATGTACAGGGTTCGAATTAAC GTATCGCGTTTCGCAATTCGTGATGCGTTTTTGTACGAAGCAAAAATTTA AAAACTCACCAAAATCGCAATACAACCTATATAAAAATTTTTACAGCTCA CTAAGTCAGTTTTATTAAATGAGCGTCCAAGCAAATAGAACTGTTATTTG GCTTATAAATTAGTTTGGAGAGTGGAAAATGCATTGTATATTTATAAAAA CGCATCGTGAACTATCTAAAATATTTCGCCCCTGCAGCGCACAGATTTAA CTTACTTTGTTCACTAAAAGGTGCCATTCACTTTTAAATCGTCAAATTCA ATCCCTGAATGTATATTTAGGACAAAATTACACCTTTCAATTTACCAGGA AAATCGAGCGTCCAAGATAACAAATTTTTTTTTTACATAATATTTGGTCA CTTCTCCATAAAATTATTCTCTTGCCAAAAATATTGTAATGTCAGTTGTT AACTTTTGGTTACTTACTCTGACTTTTTTCCCTGATTTGATGCTTTATCA TGACGTGCTAATAATCTCTAATCAAACCTCATTTAACCTTCTCTAAGGAA GGACATGGATAATGCAAAGTAATTCATTCATGTAATTCCTTTTCAAATTT TAGATATCCAGCTGCGTTGTTTGTGTACTGCAGTACAGGGGTAGGTTGTC GAAAATACTGGAATTGGTTCAACTTCACATCGCCGGCTGGAGACAATTAT ATTGTGACGCAAATTGTCCAATACTCTAGAAAGAAGCACCACTTCATTTT GTGGAGTTACTCTTACAAAGGTAGGTGTTTAAACTGTGTTTTAATTCAAT ATTCCCAGCATTCAAGATTACTGACAGTAATATTCAAGGCAAAATTGAGT AAAATTGCTTTGGTGCTTGGTGCATCTTCACCAATGCTCTTTAATATTCT GTCCGAAACCTTGAACTTGCTTGTTTTGTCCTGGTACTACCATTGCTTTT GAAAAAAACTTTCTTGTAGAAGTCAAGCTAAGCATAAGTGTGCAAAACCT GACTTCTTGAGAAAGGGGACTTCCAGTCTTTTAAAAATAGGATGCAAGCT GCTATTAAACCAGTTAGCTGTTTTTTTGCATCCTATGAAAACACAAAGAC AACATTCTACTGTCAAAACTAGAACAGTACTTTTTAAATGTGCTGATTCG AAGAAAACCCAGAGCTGAAAAAATTGTTTTCTTCTTGAAACAAATCTTCA CAGAAAAAAGTACTGTAAATATTTTTGAGAATAATTAACCTTCGGTTCCG AAATTTTCTGAGACTTTGTTTTCTGTATATATAGACTAGAGAAAATTTTC AAATTTCAAAAAATAGTTATCCCAACAGATTCAAAAACTTTAAAATAAAA AAGATTAGTATTGTGAAATCGATAACTTTAGTAAAATGTTGTAAAGGCGC GCGATATTGGGAAAAGTTTTCACCTTCTAAACGATTTGTTTATCGTTTCA AAAAACGGTTAGTATACTTAATTTTTACAAAATCGATTTTGCTTCGATCT TTTATCGAATATTTCTCGATTTTTCCTCGATTTTTCATTCGATACTTTTT ATTGAAATATAGTCAAGCCTTGAATATTTGGGATTTTGTTTTCACTTCGT TCTCTCAAGATGAACAGGTTAGCCATTCCATTCCATTATTGGCGAAGTTG AAATACAACATTCAAATTTTCTATATTTGGCTATATTTAGCTGTAAAGTT CAACTTGTACACTCTTTTAATCCTGACTCTTCCCTTTATCTTATAGGTTG ATGTTATAAACAAAGTTAACATAAAATATCTAGAAAGTTTTATGATAAAT ACTTTCTCCCCTTTTAAGACCCCATTACTTAACATGGGTTCTTAAAAGTG AAAGTGTTTTCAGGCTAAAGTCGTAAGTATAAAGGCCATGAATCTTTCCG GCGTGATATTTTTCTAGCTTTTCAGCTTTTAGACGATGATTCTTTTGCAG TATAACTTTTCATCGAATCTCCTTCATTTCGCCGTTTTTTGTTTCATTCT TCAATCAATGTTTCTACTTTATGCGTTCTCTCTTCTTACATCGCGAAAAG TCCTTTTCCAACTACCCATATCCTTTTCAAAACTACTATATATTTGATCG CTGAGTGATTTCACTGAAGATTGCCATCCTAGATGGCATCAAACTTTGAG TATGAAATTAACTTATAAATCGTTTTTTTTTACTCAAACTAGTATATTTG AGCACTGTGTTATTTAGACAGTACCAAGTAAGTGAGTAAGTAAGTTGTCT GTGTGTTTGATAAAGGGTACAATATGAAAGGGGTAAGGGTTATTAGGGGA GAATTTTTGTGTAGGGGGGTTCAGCATGGGGCGCTTGTTATGCATAACTG AGGGGTTTCTTACCAGTGCAGCCCTAGGGGAGAATAATAGGACTGCTCTA CTATTATTGTGTTACTTTAATTATCTGGATTTTCACGTTCGATAGAATTC ATCTGTTGTTTTGGTTTCCCTTCTTTTCTACTTTCTCATTTATACTGCCA GGGAATAATATTTGCTCTTATTGTTGTTCTTTAGATAAATTATGGATAGA AGCTGATGATTTAAAACACCCAGTGGTCCAGTATCAACATGAACGACCCA AATGTCGGTCTCATGAGGTCCACTTCATGGTCCTGGAGAAAGTTTCAACA CTTGAGGAAGCGATAAAGAAAAATGAACAGAAAAATCTTAGCTCCGAGCA AACTGGATCCGAAAGCGCACCCGTGACCCCTGAATCCCTGGAATCACCGC TTTGCTCTGGAAATAGTAGTGTTATTGTACAATACTCTGGGCAATCGAGT CGCAAAACCTCGCTTTGTAGCAGTGATGGTATTTTACCGAACGGAAGATT ATCGAATGATAGCGACCGCCCAATTGAAGGGCGTAAGGACAGTGGCGAAC TTCCAAATGATCAACTTCGAAAGAAATCCTTGTTGCACGTACCTTATTAC AAGCCGTTTACAGCACGTTCAAAGCAANCAGTACCAAGTAAGTGAGTAAG TAAGTTGTCTGTGTGTTTGATAAAGGGTACAATATGAAAGGGGTAAGGGT TATTAGGGGAGAATTTTTGTGTAGGGGGGTTCAGCATGGGGCGCTTGTTA TGCATAACTGAGGGGTTTCTTTACCAGTGCAGCCCTAGGAGAGAATAATA GGACTGCTCTACTATTATTGTGTTACTTTAATTATCTGGATTTTCACGTT CGATAGAATTCATCTGTTGTTTTGGTTTCCCTTCTTTTCTACTTTCTCAT TTATACTGCCAGGGAATAATATTTGCTCTTATTGTTGTTCTTTAGATAAA TTATGGATAGAAGCTGATGATTTAAAACACCCAGTGGTCCAGTATCAACA TGAACGACCCACATGTCGGTCTCATGAGGTCCACTTCATGGTCCTGGAGA AAGTTTCAACACTTGAGGAAGCGATAAAGAAAAATGAACAGAAAAATCTT AGCTCCGAGCAAACTGGATCCGAAAGCGCACCCGTGACCCCTGAATCCCT GGAATCACCGCTTTGCTCTGGTAATAGTAGTGTTATTGTACAATACTCTG GGCAATCGAGTCGCAAAACCTCGCTTTGTAGCAGTGATGGTATTTTACCG AACGGAAGATTATTGAATGATAGCGACCGCCCAAGCGAAGGGCGTAAGGA TAATCGCGATCTTCCAGATGATCAACTTCGAAAGAAATCCTTGTTGCACG TACCTTATTACAAGCCGTTTACAGCACGTTCAAAGCGTACAGCTAGAGAA AGTCCTACAAATTACAACCAGAATGCAACATCTTCTCATCTTAAATCTGA AAGCAGTAGCATGTCGCACAGTACACCAGCAAAACAGACTGTTCTAAACA ACCCTGACATTTTACAACAAACCACTAAAACATCAGACATAAAGGCGGAT CCTACGAACGCGATTTTCAGTCAAGCTTTAGCTAACGAACTCGGTGATTT TTATTCGGATCTTTTAGACCAACAATCTATGGACACTACCCAAGAAGATG GCATGTTTGATTCGACACAAATTTCCCAGGGAACTATTCCTAACCAAATG TCGTCTGATCAATTCAGCTCTACCACCCAAAACCAACAGCAAGACTCTAC AATCGACGTTCAACAAACTCTAGAACGTCGATTTAGTAACGATGTTGATT CGTTGAGTGATATAGTTGATATAGGTACTGCAATCGCCGGAGGTTCTTTT TCAAGTACCGTATCTAACGATAAAACTGGATTTAAAGATTATGGAAACCC TTTGAAAAGACTTATGGAGGAAGAGGAAGATATCAAAGGAGTTTTCCAAG CTTCTTCTGTCAATTTACAGATGTTTAATAAGACTGAAACGAATGATACC TCTTCAAGTGGGTCGCATGTAACACCAATGGATATAAATACTGATTTTGG TGAAATTAAGTCACCAACCGAGGACGAACCCAAGGTCGATTTTGCAATCA CCATGTCGACGAACAGTTATTCTGGAGCGTATTCGGACGTCAAACTGTCT GACGAGGAATTAGAAGAAATTTTAAACGGGTGATGAGTTAAGAATTGAAT CGAATATCTACCGGTAACACAGTTATGTGTGTATGTCACGTGTATAATAA ATCGCATAAACTGGTCGCTCTTTGTTTGAACGGGAACTGGAAGAGATTAA TTCTGATTTCGACTCAGAAATTTACTGTAGAGAGTCTCAAAACAGAATGA GAATCAATATGACATAAATAGTAGAGGTAAAGGTATAGCGTTCTACAGTA TGTGGCCCCCAAAACGTCAATCAAATTTGAAATGTCTCTCAAATCTAGAG GAAAAAAGGTTTTACAAAAATTTTTGCTGCATGAAAAGCTTTAACATCTC TACTTTATTTCCTGGAAGTTCTTTTTCAAAATTTTCAATTTCAACAATAT TTTTAAATCGCTTAAAGATAGCTTTTTTCTAATGGCCCCAAAAACGGAGG TTTGCAATTTTAGCGACTTCTCGAGATATCTTTAAGATATGAATACAAAA TTTTGACCATAGTTTTGAAATGTGATTTAGAGGGTTTTGGGCATAAATTT GTTTGATAAAATTTTTACAGTATACCCCTGGTTGTCAAAACGGTGGTTTG GGGCCCCCAAAACGTAGGTGTAGTTAAAATTAAATTATTAAGCCTAGTGG TAATAGGGGGAACTATGAACATATTTGTGTTTTCCCTTAAATTTACGACC CGATGGATGTAAAATTTATGATTTTTATAAAGTATTTCAAGATTTTCGAT GATGCAAAGTCCAAACTGAAAATTTAGAAATTTTCAAAATGACAATTTTG ATTTACAACGTCTTAATCAAGTTTCTGAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000257TCONS_00000257Clytia hemisphaericatranscript
TCONS_00000256TCONS_00000256Clytia hemisphaericatranscript
TCONS_00000255TCONS_00000255Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000255-proteinTCONS_00000255-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:2445250..2452430 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.59 4.14 1.96 1.28 23.36 18.06 16.33 16.3 9.87 11.82 12.53 9.89 14.25 11.51 6.34 7.08 9.93 10.07 6.65 9.35 8.52 9.7 4.89 7.03 15.63 15.81 9.78 7.07 6.82 7.61