TCONS_00000255-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00000255-protein
Unique Name	TCONS_00000255-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	796

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00000255-protein ID=TCONS_00000255-protein|Name=TCONS_00000255-protein|organism=Clytia hemisphaerica|type=polypeptide|length=796bp
MVVMAVNNRYCSDCLESGEFLPLRLVMMNLDSGLWMCPKDDCTFPLSSPS
MQLYMEEDLTTERVLLLTGNKSKQLERPPTPDSLVASISSNKQSDMLQQT
QYAVSTTSSSGSRKRKHSDGGSSSRSTKTNSFRSVSNSNITDPISSDSSS
LMANKKYPSVPLWENEELLCWLDSMLALIVLNQTLQNYPEESKGTLNKLL
SEYKHNTDIYNVTKDYETIRASMHTLRKSTLNFIQPKMLSSFTEEDSPLL
SLQLLMKTNAELYEDCEVEYSSKFTCNQCQFEKTDGFKKTILTLPEGYPD
LNFVENLYYKRNCYKCNAPEQKNVFYIEKYPAALFVYCSTGVGCRKYWNW
FNFTSPAGDNYIVTQIVQYSRKKHHFILWSYSYKDKLWIEADDLKHPVVQ
YQHERPTCRSHEVHFMVLEKVSTLEEAIKKNEQKNLSSEQTGSESAPVTP
ESLESPLCSGNSSVIVQYSGQSSRKTSLCSSDGILPNGRLLNDSDRPSEG
RKDNRDLPDDQLRKKSLLHVPYYKPFTARSKRTARESPTNYNQNATSSHL
KSESSSMSHSTPAKQTVLNNPDILQQTTKTSDIKADPTNAIFSQALANEL
GDFYSDLLDQQSMDTTQEDGMFDSTQISQGTIPNQMSSDQFSSTTQNQQQ
DSTIDVQQTLERRFSNDVDSLSDIVDIGTAIAGGSFSSTVSNDKTGFKDY
GNPLKRLMEEEEDIKGVFQASSVNLQMFNKTETNDTSSSGSHVTPMDINT
DFGEIKSPTEDEPKVDFAITMSTNSYSGAYSDVKLSDEELEEILNG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000139	XLOC_000139	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00000255	TCONS_00000255	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR028890	Peptidase_C98

Vocabulary: **Molecular Function**
Term	Definition
GO:0070140	SUMO-specific isopeptidase activity
GO:0032183	SUMO binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0032183	SUMO binding
molecular_function	GO:0070140	SUMO-specific isopeptidase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028890	Ubiquitin-specific peptidase-like, SUMO isopeptidase	PFAM	PF15499	Peptidase_C98	coord: 162..418 e-value: 3.8E-40 score: 138.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 624..651
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 432..457
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 474..572

Blast

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BLAST of TCONS_00000255-protein vs. Swiss-Prot (Human)
Match: USPL1 (SUMO-specific isopeptidase USPL1 OS=Homo sapiens GN=USPL1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.029e-21
Identity = 111/506 (21.94%), Postives = 211/506 (41.70%), Query Frame = 0

Query:    8 NRYCSDCLESGEFLPLRLVMMNLDSGLWMCPKDDCTFPLSSPSMQLYMEEDLTTERVLLLTGNKSKQLERPPTPDSLVASISSNKQSDMLQQTQYAVSTTSSSGSR--KRKHS----DGGSSS---RSTKTNSFRSVSNSNITDPISSDSSSLMANKKYPS----------------------VPL--------------WENEELLCWLDSMLALIVLNQTLQN----YPEESKGTLNKLLSEY-KHNTDIYN--------------VTKDYETIRASMHTLRKSTLNFIQPKMLSSFTEEDSPLLSLQLLMKTNAELYEDCEVEYSSKFTCNQCQFEKTDGFKKTILTLPEGYPDLNFVENLYYKRNCYKCNAPEQKNVFYIEKYPAALFVYCSTGVGCRKYWNW-FNFTSPAGDNYIVTQIVQYSRKKHHFILWSYSYKDKLWIEADDLKHPVVQYQHERPTCRSHEVHFMVLEK----VSTLEEAI----KKNEQKNLSSEQ 440
            + YC  C E G+   L+   ++    +++C    C +PL S S+   +  DL             ++   P  P    +  SS K S +L  ++   +  +  G +    KH+    D  SS+    S + N  R+  +    + + +D+   MA  K P+                      +PL              W+N   LCWLD +L+ +V ++ L+N       + +    +LL++Y + NT +Y                ++ +  I   ++ +R      +QP++  +  + +SP+ +  LL+K    + +     +S  F C+QC  +  +   K+++T     P+ + +   ++   C  CN+  Q     +EK      ++   G+      ++ F+F    G  Y +T ++QY R  +HFI W     D  W+E DDLK P  + +H++    + E+H ++ E+    V+  E A     K N+Q  LS+E+
Sbjct:   43 DEYCPACREKGKLKALKTYRISFQESIFLCEDLQCIYPLGSKSLNNLISPDL-------------EECHTPHKPQKRKSLESSYKDSLLLANSKKTRNYIAIDGGKVLNSKHNGEVYDETSSNLPDSSGQQNPIRTADSLERNEILEADTVD-MATTKDPATVDVSGTGRPSPQNEGCTSKLEMPLESKCTSFPQALCVQWKNAYALCWLDCILSALVHSEELKNTVTGLCSKEESIFWRLLTKYNQANTLLYTSQLSGVKDGDCKKLTSEIFAEIETCLNEVRDEIFISLQPQLRCTLGDMESPVFAFPLLLKLETHIEKLFLYSFSWDFECSQCGHQYQNRHMKSLVTFTNVIPEWHPLNAAHFGP-CNNCNSKSQIRKMVLEKVSPIFMLHFVEGLPQNDLQHYAFHF---EGCLYQITSVIQY-RANNHFITWILD-ADGSWLECDDLKGPCSE-RHKKFEVPASEIHIVIWERKISQVTDKEAACLPLKKTNDQHALSNEK 527

The following BLAST results are available for this feature:

BLAST of TCONS_00000255-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00000255-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
USPL1	1.029e-21	21.94	SUMO-specific isopeptidase USPL1 OS=Homo sapiens G...	[more]

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TCONS_00000255-protein (polypeptide) - C. hemisphaerica

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