TCONS_00000255-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000255-protein
Unique NameTCONS_00000255-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length796

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000255-protein ID=TCONS_00000255-protein|Name=TCONS_00000255-protein|organism=Clytia hemisphaerica|type=polypeptide|length=796bp
MVVMAVNNRYCSDCLESGEFLPLRLVMMNLDSGLWMCPKDDCTFPLSSPS
MQLYMEEDLTTERVLLLTGNKSKQLERPPTPDSLVASISSNKQSDMLQQT
QYAVSTTSSSGSRKRKHSDGGSSSRSTKTNSFRSVSNSNITDPISSDSSS
LMANKKYPSVPLWENEELLCWLDSMLALIVLNQTLQNYPEESKGTLNKLL
SEYKHNTDIYNVTKDYETIRASMHTLRKSTLNFIQPKMLSSFTEEDSPLL
SLQLLMKTNAELYEDCEVEYSSKFTCNQCQFEKTDGFKKTILTLPEGYPD
LNFVENLYYKRNCYKCNAPEQKNVFYIEKYPAALFVYCSTGVGCRKYWNW
FNFTSPAGDNYIVTQIVQYSRKKHHFILWSYSYKDKLWIEADDLKHPVVQ
YQHERPTCRSHEVHFMVLEKVSTLEEAIKKNEQKNLSSEQTGSESAPVTP
ESLESPLCSGNSSVIVQYSGQSSRKTSLCSSDGILPNGRLLNDSDRPSEG
RKDNRDLPDDQLRKKSLLHVPYYKPFTARSKRTARESPTNYNQNATSSHL
KSESSSMSHSTPAKQTVLNNPDILQQTTKTSDIKADPTNAIFSQALANEL
GDFYSDLLDQQSMDTTQEDGMFDSTQISQGTIPNQMSSDQFSSTTQNQQQ
DSTIDVQQTLERRFSNDVDSLSDIVDIGTAIAGGSFSSTVSNDKTGFKDY
GNPLKRLMEEEEDIKGVFQASSVNLQMFNKTETNDTSSSGSHVTPMDINT
DFGEIKSPTEDEPKVDFAITMSTNSYSGAYSDVKLSDEELEEILNG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000139XLOC_000139Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000255TCONS_00000255Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028890Peptidase_C98
Vocabulary: Molecular Function
TermDefinition
GO:0070140SUMO-specific isopeptidase activity
GO:0032183SUMO binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0032183 SUMO binding
molecular_function GO:0070140 SUMO-specific isopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028890Ubiquitin-specific peptidase-like, SUMO isopeptidasePFAMPF15499Peptidase_C98coord: 162..418
e-value: 3.8E-40
score: 138.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 624..651
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 432..457
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 474..572

Blast
BLAST of TCONS_00000255-protein vs. Swiss-Prot (Human)
Match: USPL1 (SUMO-specific isopeptidase USPL1 OS=Homo sapiens GN=USPL1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.029e-21
Identity = 111/506 (21.94%), Postives = 211/506 (41.70%), Query Frame = 0
Query:    8 NRYCSDCLESGEFLPLRLVMMNLDSGLWMCPKDDCTFPLSSPSMQLYMEEDLTTERVLLLTGNKSKQLERPPTPDSLVASISSNKQSDMLQQTQYAVSTTSSSGSR--KRKHS----DGGSSS---RSTKTNSFRSVSNSNITDPISSDSSSLMANKKYPS----------------------VPL--------------WENEELLCWLDSMLALIVLNQTLQN----YPEESKGTLNKLLSEY-KHNTDIYN--------------VTKDYETIRASMHTLRKSTLNFIQPKMLSSFTEEDSPLLSLQLLMKTNAELYEDCEVEYSSKFTCNQCQFEKTDGFKKTILTLPEGYPDLNFVENLYYKRNCYKCNAPEQKNVFYIEKYPAALFVYCSTGVGCRKYWNW-FNFTSPAGDNYIVTQIVQYSRKKHHFILWSYSYKDKLWIEADDLKHPVVQYQHERPTCRSHEVHFMVLEK----VSTLEEAI----KKNEQKNLSSEQ 440
            + YC  C E G+   L+   ++    +++C    C +PL S S+   +  DL             ++   P  P    +  SS K S +L  ++   +  +  G +    KH+    D  SS+    S + N  R+  +    + + +D+   MA  K P+                      +PL              W+N   LCWLD +L+ +V ++ L+N       + +    +LL++Y + NT +Y                ++ +  I   ++ +R      +QP++  +  + +SP+ +  LL+K    + +     +S  F C+QC  +  +   K+++T     P+ + +   ++   C  CN+  Q     +EK      ++   G+      ++ F+F    G  Y +T ++QY R  +HFI W     D  W+E DDLK P  + +H++    + E+H ++ E+    V+  E A     K N+Q  LS+E+
Sbjct:   43 DEYCPACREKGKLKALKTYRISFQESIFLCEDLQCIYPLGSKSLNNLISPDL-------------EECHTPHKPQKRKSLESSYKDSLLLANSKKTRNYIAIDGGKVLNSKHNGEVYDETSSNLPDSSGQQNPIRTADSLERNEILEADTVD-MATTKDPATVDVSGTGRPSPQNEGCTSKLEMPLESKCTSFPQALCVQWKNAYALCWLDCILSALVHSEELKNTVTGLCSKEESIFWRLLTKYNQANTLLYTSQLSGVKDGDCKKLTSEIFAEIETCLNEVRDEIFISLQPQLRCTLGDMESPVFAFPLLLKLETHIEKLFLYSFSWDFECSQCGHQYQNRHMKSLVTFTNVIPEWHPLNAAHFGP-CNNCNSKSQIRKMVLEKVSPIFMLHFVEGLPQNDLQHYAFHF---EGCLYQITSVIQY-RANNHFITWILD-ADGSWLECDDLKGPCSE-RHKKFEVPASEIHIVIWERKISQVTDKEAACLPLKKTNDQHALSNEK 527          
The following BLAST results are available for this feature:
BLAST of TCONS_00000255-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
USPL11.029e-2121.94SUMO-specific isopeptidase USPL1 OS=Homo sapiens G... [more]
back to top