XLOC_000051 (gene) - C. hemisphaerica

Overview
NameXLOC_000051
Unique NameXLOC_000051
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:1933671..1935433+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000051 ID=XLOC_000051|Name=XLOC_000051|organism=Clytia hemisphaerica|type=gene|length=1763bp|location=Sequence derived from alignment at sc0000001:1933671..1935433+ (Clytia hemisphaerica)
ttaaaactttggctcggacatacctgtcatcactcgcaaacctagtaccc cctggGGCTGGGTGTCAATTGCTTATCTTCCTATGACCCTGGTGGTCTGA TAGCAACCTGTAGCTGCATCTTGAAGAATCTGTTATCATTCACATGAATA ATAGTTCACAGGCTCTCAGATTACCATTTTTCAACAATGATGCGTTTGAA GTGGACTAATCGGGTACAAACTTTTGGTCACCTTCAGTCGCTACGTCGCT ACAACATCTACAATATATTCATCTCCTGCAATTTTTCCCAAAGATTTGCA AATCTGCAGGGTTTGTAGATTGAAATTTGTTGATTGCCTACATGATTTCT TTTCACTGCCATAACGAATGCCAACTAAAGGATTGCTAAAAATTGGTTTG Agggattttttcctgtatttttatcaaaatagtctttcttttcatttcag AAAACAAAATCTAGTTGTAATGAATGTTATGAATAAATGTAACCCTGAGT GAAATGTAAACTGCACAATgtcaatttattttaaatgttcAAAGTCGCTT TCAAGATTTACTCAAAGCCAAACTTGGAGGAAAGTTTTAAATACAACTCG TTCATATCACAATGAGTTAACTACAAGACCTGCATTGTTACAGCCTGTCC TGTTCACCGCTGGAGTTAGCATAGGCTCTTTTGCAGGATGCTCCATTCTT CAATATGAGcgtgtcaaaacaaagatgggtGAAGAATCTTCCATATCCAA GTTACTGAGGAGGCGTAAAGAAAAAGGATTTGAATTTCGAAACCAGATAA ATAAATGGTGGAATGGTCTCCATGAAGGTCACAAAGTAGCAGGTGTTATC ATTGGCATGAATCTACTGGTATTTTCAGCATGGCAACTTAAAGGGTTACG TTCTTTTATGGTCAAGTGGTTCACTTCAACACCGGCTGTTAAAAAATCTT CACCATTGTTATTGTCTTGTTTTAGCCACAGTGACATTTGGCATATCGGT GCAAACATGTTTGTGTTATGGAGTTTTGCACCACTCATTCAATCTTTACT AGGCACTGAACAATTTATTGGTTTCTATACAGCAGGTGGTACAATATCTT CTTTAGCAAGTTATTATTTCAAAGTAGCAGTTGGCTCTGCAGTCCCTTCC CTAGGGGCATCAGGAGCTCTTCTAGCTGTACTGGCAGCATGCTGTATTGA ACGTCCAGACGCACGACTTTCCATAttatttctaccattttttacaTTCT CTGCTCAAACTGCACTATACAGTATTATAGCAATAGATGTGACTGGTTTA TTGTTACGATGGAAGTTATTTGATCATGCAGGACATTTAGGTGGTACCTT ATTTGGTAGCTGGTATGTTATGAAAGGACATGAATGGACTTGGGATAAAA GAGGTCCCTTTATAAGATGGTGGCATGAGTTGCGCCAGtcaatgaatgaa aaataatattttatgtaaTGTTGTCTTGCATCATAGTTTTGTATTAAAAT CAAGTACAGTGTGTCCCGTTTAAAGCGTTTGGTGTCATACCTGGTCATAT TAGTTTATatcaatattttatcaaaattaattaACGTGTCAACACTCATT CACTACTAAGAATAACCGGAtgaattttaaggtttttgaaCCACTTTAAT TTATACGAGACATCTTGTATTTTATTGTATAACTAGCTTTGtaatactaa aaaatattttagcttATAAAATTTCTGTTTATTATTAATCTACAAGAGAa cttaaaattagaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000102TCONS_00000102Clytia hemisphaericatranscript
TCONS_00000103TCONS_00000103Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000103-proteinTCONS_00000103-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:1933671..1935433 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
54.36 58.67 23.73 21.53 23.13 15.77 19.29 19.73 18.77 23.75 15.34 11.93 13.25 11.03 13.94 15.47 31.41 25.49 9.26 12.39 21.33 17.61 76.2 70.5 15.44 20.68 12.8 12.14 45.06 44.73
Spatial Expression
in the tripal_feature_cv_term.tpl.php