XLOC_000035 (gene) - C. hemisphaerica

Overview
NameXLOC_000035
Unique NameXLOC_000035
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:1521423..1530269+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000035 ID=XLOC_000035|Name=XLOC_000035|organism=Clytia hemisphaerica|type=gene|length=8847bp|location=Sequence derived from alignment at sc0000001:1521423..1530269+ (Clytia hemisphaerica)
CTTGTGTCAAATTTCAAGATGGAAATTACCAAGTTTAGCGTTTTATGGAC AGAGGTTAGTAAGAAAAATGGGTCTTATACTTTTCCTCCAAAAATTATCA CATTATAGGATttgttcatttaaaaaatttaccgGTCGGGGATACGTCCG TCGGGGAAACGTCCGGTCACCAATATTCGAATACTAACAGTTTGTCACTT TCTAACGAGGATGAACTGTAATATTGAGCTAGTTTCTCGAAGGGAAATCA CGAAGCCCAAGTACACATTTTTGCCATGTTCTTAAgatattcttaaaatt tcgtCGACTTCCAGCCATGTTCTCATAAActtggttctaataaaaaagaa cGTGTAGTATAGTACAGGCTAGATCAGTTCTTTTCGTTGGAAAGATTATC TCAGATGATGGATAGTAAAATCTTGaattgaagaaaatattatcacccct tctcacagaccgactgggaccccttcctactggaaaaactggacaaaata tcgttcccagtggaaaattattctCCATTTTCGTCcatattgaaaataat cagaaaagcAAATCCTCACTAAAAAGTattgttctattttttttatcccc actggattttctggctcgaaagctgtgaaaaaacatgggaatatcaatcc ccatcccAATTTTACCGGGACTTTGAAAAAGGGGGTGTATATTAGGGAGA TAAACTTTGAAATCTAACACTCTAATGGGTAAGTAAAGATTAGGCTTGAT AATGGATAGCGGAggatttcttaaaaatattttgaaagtacaATTTCTTT CTGACTTTGAACGAACGATAATGACTATGAAAATCGATCAATTATTGAGT GACTGTGCTAATAGTAATGATGTTTATATTTCAAAGTTAGtgaaaaatca gtgattttttgaaagttcataGGGCAGATAGATGGATAGATTCATTATGT TAGACTTGGTTGGAAATTCATTTCTATCGTGTGGCCTTTGAAGCCAAACA ATCAACATCGCGGTCGAGACAGGGCCCCTATAATTCGCGTTTTCCCCGTT TTTCGATACATTGTAAGGTATTGCACTGTGAGAGTTTTCATAGAAAGAAT GTTTATAGAGGAAAGAAAAATGTATGAGATATAGAAGAAGAGAATAGTGG AATGGCAGAAAATATAAGATAATTAGGAGGGggtataaagtaaaaaaaat atagAGGGAAAAGAAAATTGGGTTGAATATATATCTTCTATGGTGgcgat gaaaaagaaaagattttttgtgtGAATGAACATAAAcagattatttttgt tttatgtttgttgatcttaaacaaaaagtttgatactgaGCCCTTTTTAA AAGTTCGcgatttttactgatttttagtgagagaaaatgaagaaaaatgg aCGTCATTTGCTACCAatcatcttctttttcaattctttcattttctcat CTTGATTTAGGGGATAAGAATTAAGTAAAAAATTATCAGGAATGAATGAA ACGACTattttagtttgttttgtttggttttttaatgtttttctttttgg tgtTCTTTAAATAGGTTGCTAATTTTTATCCTTTAATACTATTTTAGATC TgatttagtttcatgttttttgtttacatgaTGAAGGGGGTTGGTACAGA GGTTTGACTTAAATTATCTTTTTCTAATGAAcatttaaaatgttaaaaat ttgttAGTTAAgttttctttatatttctttttgacTAATTTATTCACAAA TTGATTCACGCACATAGTtcaactttattttttaatatggtCTGTTtagt acatgtttttctttcgaATCTAACAGTCATCATGTTGTTTTGATTATACA TAGTAGACTTGTGGTAGACATGATAAATACAGCTACGTgctctcattttg aaaatatgaaattttaaatttccttGATTCACAACGCTGAAACATCttga atattttgttttgaatgattGTTGAGAGTGTCACCAgcatgaattttttg tttgggAATGAAGTAAGTTTGATCATTTTAAAAGAATGCAATCTAAGAct caaagattcttttttttataagaacaatgttttaagaacaacgaggctgg aaaatataagaacaatttaagaataatgctgACCCTGTGGAACTGCCGAG TTTCAAGAAATTCAaagatgttctttttttttaagatatctCAATCTTGC TCCTAAAATATAGGAACAgtataagaacaatctgaggATTAGAGGTTCAA AAATAAGAATGGTCGGTCCTTAAGAAAAGTTAAGACTACAAttcactggt tcttataaaaaaaggagtATACGGCATTAAAGTTAAACCCGTAGCCGACT AAGATTTCGACAgacctgtctcacagccccggtggaactctTTTTCTTAA TGggaataaaaattctattgttccaaggttaaaaaatccagtggggatgg ttttggagtgcaatttttaaacattgaatttcgagtggggatgaaatcaa agtcaattttccaatggggctaaaattccagggtattttccaacCGCGCT acattttccagtggggctggggttccAGCGGGTTTGTAACACAGGGGTGC ATTTTGTCAAAACGAAAAAGTTAGAGGGTTTGATCAGACGAAAAGCTGAG GCGTCAAAGAAGAAATGGACCAACTATGAAAAGCGGTTTCCGTGATGGCG TGATAAGGAACTTTTTCTTGCGTAATAACgtgttttgcaaattttttatt ccaTCTTTGAGTGATCAGAGGTCAAAGCGTGATTGTGAttggaaagattt ttgagccgtgatgcgtGATCTGGACTTTCTCAAAAGGAATGCGTgattat ccaaattttttatttattttcgtgatcgtgattgaagacaaaaaatagCG CAACATTGTGATAAATCATAcattcaatttttgaagtttAAATCTATCCT CTACTTTGAAATGACATGTATATGTGTTCATTGTACTGGGCTAAGTTACG TTAATAATACTCCGGTATAGATAATATTTTGATATCCCGCACTGGCATTG TTTGCACTCGTGGGTCTGTAAGAGAATTTGGCCAGGTTTGCTATTCAGAT TCGGAACGAATTAACCCAGTCGCTTTCGAGCATGAGGCAAGgaggttttg aatgttttgactAAACAACCAGTAAGATCGTCACATTCGCCATATCCTAT TAGCAAAGCGTGGTAttcgcagaatggatgatctgttacacgttttttta taccaacaaactatataagaacataaggcttcgacggccaaaattttcag aatatttttaaggctttatggactcaaaaacactcgatttcttaggaaaa tgggtaaaaatggtcaaaaatttgttaaaataagaacatgctaaggaCAT CTCTTAGTGAAGAGTATGAGATGACAGACTTTTGAAAGATGAGGAAGAGA GAAGAAACCACATATGATTCTAGACACGCGGTAGGGGGCGAAGCAAAGCA GCTACCTCCATTTAATCGTGATTCGAATTAAAATAACTGAGATAAATCGA AATTAATTTGCCATTCAAAAGGGTAGGGTTTCATTTTTCATAGATTCCAA TTGAAATCTATGACGACTGCATAATGAATTGAATATGTCAAAATGAATTC GATAGCCAGGGGAGGTGCTATTGTTTCgactgttcttttttgtttcctGT CTGTGATTTGATGTATCGAAAATCATTTCCGTGTAAAGTTAACGTGACAT GTGgggaagttgaatttttctGAGTCAGTTTATTTTCTGAGTCAGTTTAT TTTCTGGTGTAAAAAATATTGAACCGTTGAACAGATTTAGTGTTGATACT ACTAGAATTCCAAAATGACTCCACAGTCAACAGATGATGAGGTAGGATTT ATCAACATTCTCCAATATACCGTGTGCATCAAGAAAAAGTTGATTCTTTT TTATTCTATATAGGAAAActcaacttaaattttggtatatgaAGCTTCAG TTCAGTCAATCAAAACCTAtgtttaaaaacctgaaaattttgaCCTACCT AAAATGACAAAATCACACTTGCgtatgtttcttttctcttctaACTCCAC ACTTAACAAATTATAAGGTGGGATTCAATAACATTCTCCAATATACAAGC AAACTTTCTTCCTTGAGTAAATTATTCACTGtatgtttcttttgtttctc ttttctaaaactttttaaaactgCAATCTACAGTACTAACggtacccggg gggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaattttttcaaa atctgtcgTTGCTATACATGAGGATATTTATAAGATTTTTCAGGAAAGTT GTGAACGATTGCCGCGTTTACgcttgtatttttttaaattaaaatgccgt ttgaagaaactttttgttaatttaatgCAGGCTGTGTACTGTATTAAACA TTTTCACTTACACACCTCAAAAGCAAGCTCAgtaatatgcttgtaatatg cttattttttagacaaattcaggTCTTGGTATgcttatgcttataaaaaa aacatgtagtctaGATATTTTGCCCAAatatgctagaattttgaccattt tttgctcaaaaaggattgaaaattTGGGAGGAAATGTACTCTAAGGGAAC GGTACTCTTTACCAGAGCAGAGTGTCTATATCTTACGTACTGTGTGACTT AGTATAGCCTTTCACTATCCCAACACATGATTTCTCTAGCACTCTGTGGG ACAGGGTtgaggaaaaagccgtggtcgttTGCCGCAGTGGTAGTTACAGA GCCAAAGCCGATCGAGCACCAAATAACGCCCCACGCAGCGAAGCCCATAG TGATAAAGAGGCGGTGCAACAACAAGACAGTTAAGTCTGTGTGTGGATAA GCCTGGTGTTATGTAGTGCGTTAATGAATTATGAATGAAATTCCGTATGT ATCGGGTCTGGCATTATACATTCAGATATTGGGTACATCTACCTTGAAAT AACACAAAACCAAGCTGGCGAATAACTCACAAAATTCGGTCAATTCGGTT CGTCTCTCGAAGTATtcggaaattttcattttcagtggataCCTATGTTT TCATTTAAGTACGGTACATCTGCTGGAACAAAGTAGTTTTGCCGTTTTTA ACAAGCCAatgcaaaattttataaaatttgaaatttttcttcaagcCTGT GCTTATCATATTTGCATGACAACTTTAACACCTTGAGTGAAAAGGCTCTG TTGGACAGATTCTATTATGAATAAAATCAACATCTTAAGTGTGAAATGGG TAAATATTAAGTTCAGTGAATTTCCAAATACTGTATATAAGCGAGCCTCA AAGAAAAGCTGCAAACTTAAATTACCATCTGCAATGCTTGAAACTTTTCC AGACAGTAGGGTTTAGAAAGTGAGAGAGCTTTTAACTTATTCCTGTCaag actatatatatatatatacggGATTGACGGCATATTTAAGAACGTCATAA tacagtctccataactcgaacacgttcgggaacacaaatttgttcgagtt aaagagatttcgagatatggagtaaggtttacaTGGCATAACTgcggacg agaaaacttgttcgagttaaggagatattcgagttaaagaggttcgagtt aaagagactctactgtaattCTAAGCAGGGAACTCTCAGCAGGCACACAa cgctgtttcaacgttcatctaacgttatatggacgttgtgaacgttagat aaacgttgaaacaacgttgtatgccagCTGGGTAGTTATTGATGATAAGT GTAGCCAAGTCTGAGAAGAAAACGTTTCAAATTCTTCATTTTATAAATTG ATAGGTTGACAGAAATAGAGCAGCACAGCGGCCTTCGCTCAGCATGTTCA TAGCAAACGATACAAGTACACCTTCTACACACGTCCGAAGAAGAGGCTCT GTACAAAGTATAAATTCGGACACTGACTCACGTGGCGTGTATGATCAAAA ACAATACAAACGACGACGTAGAAGAACCTGGGAACGAGGTGAAACGGAAA ACTCGTTGAAACGAAACCCGAATAATGCACCGAGGATTCGGATCAATGTT CGGGGACGGAAATATGAAACGTACATAGGTAAGATAGttgaatttccatt tttcattgaaaactgaaaaacctCCAGTGTCACATCACGATTTGAATTAT TTCAAACTCCTACAGGGTCAATGAATGGATAGACATTATTTGAGGCTAGA AAAGCGTTGCTTCCAGCTCAAAGATTATCCAGAGGTCAGAAAGTTGGTAC ggattttttttgtaagaagcctttgttcttttaacttttttagttttaag cctaaagatgtttttattttcaccactttgtgggtatttctttccatttt cctaagaaatcgggtgttttagagtccgcaaagccttgaaatgttcttgc cttgttcttaaaatgttggCCATCGAaacattatgttcttatattctTTG CAAAAAACATGTATCAATTAGATAGTGAGAAGGCNGTTCTTAAAATGTTG GCCATCGAaacattatgttcttatattctTTGCAAAAAACATGTAAATTA GATAGTGAGAAAGGTACTTTCAAATAAGTTTCCATAATATTAAACAAATT CtccattttctttttattagacACACTTGACCGTTTTCCAGACACGTTAC TAGGCAACAAAGAACTTCGTAACCAATATTACAATGAACGTAAAGAAGAA ATTGTCTTGGGTAGAAATTATGAAGTCTTCGAAGCCGTGCTCTTCTATTA ccaatcaaatgggatcttggGTAAGTTTTTAAGAAGACAAAACTCTCAca acaagttttcaaaaaatcttggcGGAAATTACAATAAATCTTTTGTCCCA TGGATCTTTGACCAAAGCCTTACCCTTACAAGCAAAACGGAAATCGTACA AACAAGTTACGCAACTATACGATAAAGTCGTTCTTTCTAATAATATTGAT TTAATCAAGATAATCAGGAATTTTATACACCATTAGCATcagcatcccct atatcaaaacatatcagagggaaTGCGTGCAGCCTAATAGAATTTTAAAC ATTATTCCATTCCAGCAAGACCAGCTTGGGTTAgcgaaaaagattttgaa aaagaactaaaGTTTTATCAACTGCAACCATCCGAATCTGAAAAActgag aaaagaaaaagaagctcAGAAACAAGCGGCTAAAACGTTAGCATCAGAGC GCCGCCCTGCTTATCAGAAACTCATATGGAACCTTATGGAACACCCTCGT TCATCAACGCCCGCCTTCACATGCGCCATTCTCAGTATCTTTACAATCAT CATTTCAGTCGTTGTAATCTGTCTTGAAACGATGTCCTCGATCACAGACG ATCCTGATAAAAAACGAGGCTACATTAATcgcaaagttttattttatctt gAAACGACAGTCATGATATGGTTTACTATGGAGTATTTATTGAGAATCAT TTCAGCTCCCAGAACGTTCAAATTCATATTATCACCTACAGGAATAATAG ATTTGGTTGTTATATTACCTTATTACATCAATATTATAATCGGTGAAGAA ATCCGTTCGTTTAATTTAGCGGTATTCCGTATAGTGCGAATGTTTCGCGT TTTCAGGATTTTCAAATTAACTCGATACAGTACCGGATTGAAAGTGCTGG GTCGTACTATTCTTGAAAGTTTTGGACAACTTGTTGCTCTCTTTCTCTGC TTATTTTTGTCAGCGATTCTATTctccagttgtttattttttatcgaACA CGATAGCTTGGACCATAATTCCGAAGTGTTTATTAGTATTCCGGACACTT TTTGGTACGTCATCATTACTATGACTTCGGTTGGTTACGGAGACGTCGTT CCGCGAACGTTAATTGGACGTGTAGTTGCTGCCTTTTGCATGGTAACAGG AATTATAGTTTTGTTATGTTTACCAACACCCGTCTTTGTGACGCATTTCG GACGATTTTATGAAGACGTCATCAGTAGGCCGGCCACTGAACAAGAAGAG GATGATGAATTGACCGACTCTGAGATTTGGCGTAATGGTGAACACAATCT TATGATCCCAAGGTGGGTCAATGATGATGCGTGGAAGGAGAAAATTAGGA CTGATGTTAATCAGAATCTGACGTTACCAGGGTTAAATGTTTACTTGAGT ACGTCTAATCTGTTTTTATCCAGAGCTTGCAGTCAAGAAGTGTTGCATAG TATTCATAACTCACCAAGTAAGTAGAATctggtaattttgaaaaatgttt tttttgtaaaaattatatactttttgggttttaccaaagaaataaag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000069TCONS_00000069Clytia hemisphaericatranscript
TCONS_00000070TCONS_00000070Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000069-proteinTCONS_00000069-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:1521423..1530269 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.42 1.2 0.29 0.26 2.8 2.22 3.43 3.73 2.03 3.5 2.8 2.42 2.83 2.99 3.73 4.97 2.66 2.71 4.57 3.57 1.99 2.24 2.93 3.38 2.28 4.08 0.42 0.92 1.31 1.16