TCONS_00008572 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008572
Unique NameTCONS_00008572
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2723

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008572 ID=TCONS_00008572|Name=TCONS_00008572|organism=Clytia hemisphaerica|type=transcript|length=2723bp
CAACAACAGCAGCAACCACGTATCCGAAGAAAATTACCGTTGACAAGACA
ACTGTCTGGTGAAGACGCCGATAAAGAAATTGATGACGAAAAACAAGATT
CCGTTAAGCCAGTTTCAGAAACTGAAGAAGTACAAGATGAACAAAAAGAG
GCTGGTGACGATGTTGTTGAAAACCAACAGAATTTAGATGAAGATGATAC
GAGGAACAAACAAGATATGATTCAAGAGCGAGCACGTCAACTCATCTTGG
AAGCACGCAAGAAAGCAGAACAGAATAAGGACGCTGAACCAAGTGCCAGT
GACGACCCTGATGTTCGTGCCAAGAAATTCTCCGAGATGAGGAGACAACG
TGAAAAAGTTCTCCAACATAAATTGAATCAGCAAGAAGATCGAAAACAGC
TCTTACGTTCACAAGCCAATCAGTTACTTTTGGATGCCAAGATGCGTGGA
TCGCTGCATAACATTGATCGTAGCGCAAACAGTCCTTCGAATGAATTCCC
ACCCTCCGCCTTTGGTGGCGAGGATATGGAAGAGGGCGGTATGTCACCTG
AAACTCAACAGCGCATGCGCAATAATGATTTCCGTAAGAACCCGTTTACA
CTGGTGAAAAAGAGCAATAAACAATTGAAACAGATCACACCGAAGAATTA
TTTGAAAGAAGAACCTGATCCAGTTGATTCTGAACCAAAATTACCCACGA
AGACTTCACCAAGCAAGGCTGCCATAACGTATGCAGAATCACGTAAAGTG
GAATTCGACTCGTTCGAAAGTGGTTTCCAATACAAACCTAAAAGAGATGT
CGCGGCGGAAATAGCGGCCGAGCTTGCACGCTTAAAAGAAGAGGAAGATG
AAGCACAGCGTCAATTCGATCGCACTCAAGCGGAGAAGAGAGGAGGAGCA
CAACAATACGAAGGTGGAGTGCAGGATGAAGAGGGAGAGAGACATGTGGA
GGAGTGCATTCcatctgaagaagaagaagaggtgGAAGAAGGACACGtgC
CCGTCGATGACTATTTCTAcgaattggaaaattttAACTTGAAATCTGCA
GACGAGTATTATCACAACGAATTAGCACAACTTGAACAAGAAACCAAAGC
ATTAGATTTGGTGGCTCAGAAATTAGAATTAGAACTACGTAAAGCCATGG
ACGCTGGCGACCAAGAAGGAGAAGAAGATTTGCTTCAAGAGTGGTTCAAT
TTGGTCAACAAGAAGAATGAAATTATTCGAAGGCAAAACGAAATTGCTCT
TCTAGCAAAAGGTGATGACTTGGAGAGGAGATGTGAAATTGTAAACAGAG
AACTCCGTGTCCTGAGTCAAATGAACGaatgggAGAAAACAGAGGAGATC
CGGTTGCGGGAAGACAATCTATTATCACAACTTGTGACACTGGTCAATCA
GCGGAATCGACTTGTTCAAATCGAAGACACGCAACTTCAACAAAGTGTTC
ACGACGAAGAGCATGTGCAAACAGTGCTCCAACAACAAACATCTTTCAAT
CAGAAGAACACCACTGTTGGTAATGTTGTTGGATGGGTCAAAGGATTCAA
ATCTAAGTTTTGGTGATTTGTTGATTATGGTTTAATAAATGGACCGAAAG
TGTTGGATGAGTTTTTCGTTGGAGAAGAAATCCTCAATCTTGGTGATTGG
AGGAAAATGGTGTTCCCTGAATATAATGGAGGTCATTCTTTTATCAACGG
GTGACCGATTGAAAAACATGACTAGAGTTTTTGAAATAGGCTTTCTTCTT
ATTTGCAAGCTATTGTTATGACCTTGGTTTTTTATTGGCTCGTGGTCCTA
AGCTTGATTAAGCTGGTcttaaatttactaattttcaagatgtttaTCTG
gcagggtcgacttttggtaaTTGTTGACAaatttcagggtggaaattaga
aacttttcaattttttgtctaTTGTTAGTCATTTtggccacttttcaggg
tgaaaatgggaaaatgtttcattttttttgacagggtcccaaatttatgA
GATATTCATATCTGACATGGTCTATTTTTTCAAACTCAAGCGGCACGTCC
CTGTCGGCCggcaaggtcagtgccccctcCCCCTCCGGGTCTCTCCCTAA
TCAATATTTTAAGTGGGAGAATGGATGACCTCTCAGTGAATGCATGTTGA
GTGGTTGTCATATTGCTAAGCTTTGTGTAATAGATGTGTTTCATTTTGGA
TGTGGGTGCAATACACCATCATTGAAGATCaagtttatttttggaaaata
cgaagtttaatttcgcgaactggtaaagaacattttagacTTATTTATGG
CCTTTTCACGATAGAAGAAGGCCGATAAAGATTGGTTGTTTTGGATAAAA
TGtagttttctttatttcttaagATATCTAAATACCtagataatgttttt
ttattttcttttctttctttaaaggttttgtttttaaataagagtgatat
cgtttgcttactcatcaattttaatttacaagttttttatacTGAATTGA
CACGGacgtggagcaagattgattagaaagagggaaagaaaaacattttt
ttgcttatatccgCACAATNgcaatgtccagggggtaaattgcaatgtcc
aggggtaattttttgtgtccacggggttgatttgatgtttgtccaggggt
ataacccgtgtccagggggttaaaaatgaaaatgtccaggggtaattcat
gaaaaaaataatatatcctccac
Run BLAST on NCBI

transcript from alignment at sc0000086:788158..798618+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008572 ID=TCONS_00008572|Name=TCONS_00008572|organism=Clytia hemisphaerica|type=transcript|length=10461bp|location=Sequence derived from alignment at sc0000086:788158..798618+ (Clytia hemisphaerica)
CAACAACAGCAGCAACCACGTATCCGAAGAAAATTACCGTTGACAAGACA
ACTGTCTGGTGAAGACGCCGATAAAGAAATTGATGACGAAAAACAAGATT
CCGTTAAGCCAGGTAACAAACTAACTACTGTAGTCGAACTGTAAATGAGC
GTGTGTACGTGTTAATCGAATATATACGAAACTCTACAAAGTAATGGTCT
ACAAAgtagattaaattaaattttagattttgatgaaaaggtTTATTTAA
CTGAAGATTGTGTccttttctcaaaaactgtacAAATCTTCGACTAACTT
TTTGTGGAGGTTTTATTGGCTATATTATTGGGTGGATGTTACGCTTGggg
tttaaaatgtttttaacttcaCCCTTTTTCTTACACCCCCATCTGCCAAA
AAAAGCAAGCTTTGGTTCAGCTTTGTACAGTACATACATATTAAAACCCG
GTAAAACGTTTTATTGTTCAAGTTTCAGAAACTGAAGAAGTACAAGATGA
ACAAAAAGAGGCTGGTGACGAGGTTGTTGAAAACCAACAGAATTTAGATG
AAGATGATACGAGGGTATGTTTAAATTATTCCTTGTCTTTATCATTattg
agtttatgtatttgcacttttgaggaNAAGAAGACGAGACACCTTCTACT
ACGCAATCTTCAACAACAAACAATGCTAAACAACAACAGCAGCAACCACG
TATCCGAAGAAAATTACCGTTGACAAGACAACTGTCTGGTGAAGACGCCG
ATAAAGAAATTGATGACGAAAAACAAGATTCCGTTAAGCCAGGTAACAAA
CTAACTACTGTAGTCGAACTGTAAATGAGCGTGTGTACGTGTTAATTGAA
TATATACGAAACTCTACAAAgtagattaaattaaattttagattttgatg
aaaaggtTTATTTGACTGAAGATTGCCTCCTATTCTCAAAAACTCTACAA
ATCTTCGACTAACTTTTTGTGGAGGTTTTATTGGCTATATTATTGGGAGG
ATGTTACGCTAGgggtttaaaatgtttttaacttcaCCCTTTTTCTTACA
CCCCCATCTGCCAAAAAAAGCAAGCTTTGGTTCAGCTTTGTACAGTACAT
ACATATTAAAACCCGGTAAAACGTTTTATTGTTCAAGTTTCAGAAACTGA
AGAAGTACAAGATGAACAAAAAGAGGCTGGTGACGATGTTGTTGAAAACC
AACAGAATTTAGATGAAGATGATACGAGGGTATGTTTAAATTATTCCTTG
TCTTTATCATTattgagtttatgtatttgcacttttgaggatggTAGAGT
GACTGAGTCGATTTGgtataacccgcagttctgaccctcAAAAATACGGT
AAAACGGTAAAAGTgatgatttaccgtcgtcctcagtcagtcaggatgta
gacaaattagatgcttaccgtctccgtcgcacaaaaaacacacacataaa
ctcggtattatcATTGCTCGACAGTGTTTTTTCCCACGCAatatagacag
ctccaggcttttattttttgcgctcgaaacgaaggaaggtATGATGCAGC
CTACAAAATTGACAGATTCGAaactaaaatcgaaatatttacGAACAATC
TGCTGCTCTtcgatgtttttaatttttatttacgTTTTGTTTCCATAGAA
CAAACAAGATATGATTCAAGAGCGAGCACGTCAACTCATCTTGGAAGCAC
GCAAGAAAGCAGAACAGAATAAGGTTTGTTGTTAGGAGAAAGAAATTGCT
GATAGCAGGACTATCATTGGCCTGGGAGAATCTACGAGAAACTGTAAAAT
GTGTTGTCTACAGAGGGCAAACCTAAGATCTTGCTGGGTCATCTCTCGGT
TAGTCTATCAATACACGAGGTCTACTACACAACCAGCCGCCAGGGTTATT
TGTGACTAAGTTTGTATAAACCATCTTCTTATATTAAGTCTATAAGCGTT
AGAAGAAAATCAATTACATTTCCCATTTCAAATATAAGGATAAAAAAGGG
GCTTCAAACTAACTTCATTGtcttatttcttttattgagaAGGACGCTGA
ACCAAGTGCCAGTGACGACCCTGATGTTCGTGCCAAGAAATTCTCCGAGA
TGAGGAGACAACGTGAAAAAGTTCTCCAACATAAATTGAATCAGGTATGA
TACAAATGTTAGCATTGAAGTAaggacaaatattttttttaattgtcagG
ATGACTCCCAGGACTATTTTGCATTCCATGATATGTCCTATGTGAGTCAC
TTCAGTTTTAGAACTTTAAGGGgaacattgggcttttccagaaaaagatt
taacccccactgttgaggatattgatttttttgaagtaTCGACCTCCTTg
aatatcctactttattagtaaagacatCCCTGGACATCcacttttaaaaa
tatgctcaaccccctgggtatcctctcttataaagatgcttacccctgga
tatcgtatttttttacttgagaAGACACTTTACCctctggatatccgctc
ccctatagatatttaaccccctggatatccacttttgaacaaaaatcgtt
aacccccaaGATAttcgatatcctcaacagggggtcacggactatttctg
gaaaatccCATTAGCGGGCGGTTCTAGGTAGTTTTTGTGTATTCTCAAGT
GAACGAGTTTATTCTTTTTGTGTATGGTAAAACATCCTAATGGGATAAGC
GCGTGGGGCTTAAACCGTAGAACACagcacaaaaaatattttttactccT
CGCCCTTCAATCATTCGTCCCTTCCATCATTCGTCAATTAGTAGCTTTCC
AATgcaatcaaactttcaaaatgaagaaaaaactttAGTGTTTTTTTCCC
TGTTTTCTATCCGTTGATGCGATTGCACAGGGTGGAATGGTATTTTCCTT
TTCGTCCTttatttttcccctttttccaAGCCCAGTCTAAAAAACATCGA
AAACAAATTTAAGCTTTTGACAATGTGTTCGAcgcttttgttttctttcc
tcAAATTCCCAGCAAGAAGATCGAAAACAGCTCTTACGTTCACAAGCCAA
TCAGTTACTTTTGGATGCCAAGATGCGTGGATCGCTGCATAACATTGATC
GTAGCGCAAACAGTCCTTCGAATGAATTCCCACCCTCCGCCTTTGGTGGC
GAGGATATGGAAGAGGGCGGTATGTCACCTGAAACTCAACAGCGCATGCG
CAATAATGATTTCCGTAAGAACCCGTTTACACTGGTGAAAAAGAGCAATA
AACAATTGAAACAGATCACACCGAAGAATTATTTGAAAGAAGAACCTGAT
CCAGTTGATTCTGAACCAAAATGTAAGTGATTTATTAATAAGATTTAAAA
TCAGTAAAAGGTCCATATTGACGTAGCCTACACAAGACGCCAGATCCAGG
TTTTCGGGTTccaaacattcaattttttgacgtcactttcgAAGTCCTTG
CTGTATGGACGTCGAAAAAACCTTGTATGCCATCTGGTCTTAGATCAGCG
GGTGATGTAATGAACTGGTTTGAATCTTCAAATGGACCAAGGCCGTTATT
GGTCTTCTAGGCTGATGACAAgcgtttatttttttttaatttcaacattC
ATTTGAAATTCTTCTTTTATGTGTGGCTTTGATGGTTTTTAAATCAGTCA
ACTTAATTTTCCCGCTCGAGGTGTCTGTCTGTCGGACcgcaagaattttt
tttatctataaagATTAAGCAATTAAAATTGGGAAATATTTCGTTTCTTG
GAGGTCTTGTAATTTTTCTTGACGTAAAAGCTTAATCTCTAGGAACTCTC
TGCACGTTTTAATAAAAAGCAACCTTGTCTTTGCCATCCAAAACAGTTGA
ACTCGCGCTGCTGCTTACATATGTGGAACATGGTAACTATAGTTTCAAGA
CATGAGTTTAGGAAAAGATGTTGCAATTTTATTCTTTCATGTTTTAGTAC
CCACGAAGACTTCACCAAGCAAGGCTGCCATAACGTATGCAGAATCACGT
AAAGTGGAATTCGACTCGTTCGAAAGTGGTTTCCAATACAAACCTAAAAG
AGATGTCGGTAAGTGTTCGACGCAGCTACTTATTTGAATCAGTGTTAAAG
GTTCTTCCCTTTAAGATAGATTTCCGACTCAGTGAAGTATATAGAGAGGC
TTCCCCGTCTCCAACttctgcataattcaccagAATTTCATGAATATCTG
CTAATCTagtataaaatcaattttccatcTTAGATAGTGGTTTAGGCGAT
CATGAAGATCTATTGAAAAACTACTGCATATCTCTTTttaatgatgacat
catcatgCCTTTTACAAGACATCGGACAAAATAATTTATCGCGGAATGAG
AATGATGGTTCTTGGAATTCTTGTTAGAATCCAACTTCGTCAAAGTCCAG
AATAAAGAACATTTCCAAGGGCTCTTATCCAGGATGAACTAAATGATCAT
CAGCAGATATGTATAAAACAGTTTCCAATCTGTTATTTATTTAGCGGCGG
AAATAGCGGCCGAGCTTGCACGCTTAAAAGAAGAGGAAGATGAAGCACAG
CGTCAATTCGATCGCACTCAAGCGGAGAAGAGAGGAGGAGCACAACAATA
CGAAGGTGGAGTGCAGGATGAAGAGGGAGAGAGACATGTGGAGGAGTGCA
TTCcatctgaagaagaagaagaggtgGAAGAAGGACACGtggtaagaaca
atttcatcAGAACATTATGCtgacatttttgtcaaaaacctaagaacata
ttaagaacaatttcatcAGAATGTAAAGTTTATTTGTCGAAATGTAAGAA
GAATTTCATCACAATATGAGGTTAATTTTTCGAAACccaaaaacaaattc
aaagaaCAATCTTTAGTCTCAAATTCCATAAAGTAAAAAATCTAAAGCTT
ATTTTAAGAACTTTAACATCTTTAATCAATACACTCTCCTCATGATAcat
gaaattttgatgatttataAACTTTTATTTGACCAGTCTATGTCTTTCTG
CTTACAGCCCGTCGATGACTATTTCTAcgaattggaaaattttgtgagta
ttttaaATTAGATGGTATTTATCATAATGTATTTAAAAGCAAAGTGTTTG
TTTCAATAAATGACCCTCTGCATTGACATCCCCCGTAAACGAAACCCTAT
TTCTATTTAAAATTTGATGTAATAGTCCCAATAGTTAAAGACCCTTTTTC
TGAGATTGAAATTCACAATTTGTGCTAGTGTTCTTCCGTCCCTGCGAAGT
ACCGAAAGCGTCGTTTCCGTCTctcgaaattcaacaaaattcaatgaaat
attatcaatagatcttttcataaattacatcacgaatatcacttgcctcg
tttcgAAATGATTGCCTAGGTGATTAACTCCCGGcggtttttattaaaat
tactttttatttataaaaaaataactcaatgtctcaagggacataatcac
cgtggtaattgtttgaatacgagtgatgttcgtgacgtaatttatgaaaa
ggtctaactacaatcagcgccgaaatatattggcaattttgggtatttta
acgtttttcagaatttaaaagtcgggcgagaattgtagtttcagtacttc
cactttgcttcattggatttttctatttgggaggggttaagtggcttcca
ggctatattctgagctttattggaaaatttttgaacttttagatcctgag
attctaaggtcctagtcctaatgttaaaactctacttccaaCTGTTCTTC
AGAACACTTAAAAATCATTTACGGtttcaaagttttgagggaattcccct
tttgtgccaaatatttctgCGCTGATTGTAGTCTTATTTAAGGTGAAAAG
ACAGAGATTGCTTTCATTCTTATCCTAAGGTCTCTAATATTATCCTTCTA
GAACTTGAAATCTGCAGACGAGTATTATCACAACGAATTAGCACAACTTG
AACAAGAAACCAAAGCATTAGATTTGGTGGCTCAGAAATTAGAATTAGAA
CTACGTAAAGCCATGGACGCTGGTGAGTTTGACCAGGGCTTTGATTTTAA
ACTTCTGTTGAGTCCATCACAGTCTTTTCTTTTGCCTGCACCTTGTTTGG
TATTCTCAACTTCATTTCAGCTATGTATGGCTATCTGTTTTTCCGCTTTT
GTACCCCTATAATATAACCTTCCTGATAATTTCTTTCCCGGACTTAAATA
AATCAGTGGGGTCTGGCTGaaattgttcattctttttctttggGTAAAAA
TGTTCGGGACTTTCTTTACATTTAGAAATTCATATTTCCGGTGCCTTGAG
ACGAGAAGAAATATTACTCGATTCAATACCTCGGTTTATTCAATCCAATG
TAGTTTTCAGGTTTCGACACTCCCGTCGTCTGGGTCGATTATAATGTATT
TTTATAATTGTTGCTAGGCGACCAAGAAGGAGAAGAAGATTTGCTTCAAG
AGTGGTTCAATTTGGTCAACAAGAAGAATGAAATTATTCGAAGGCAAAAC
GAAATTGCTCTTCTGTAAGGAATTCTCTAAAGACTTTTTTCGAATACCTT
TGTCCATAAGTTTATATATTAGATATTTTGtaatgaaaaatctacaaaat
ttgccttgtttgggGGCAAACATGCTTTGTTTAGGGGTAACGATGAATGT
CCTGAGGATCGACTGCTGCTTGTCCAGGGGTTAAAGGTCAAATGTTAATa
acctccacccccccccccttattcaatttttttccggACCGAAGAGCCCG
ATACTTCTAAAGTGCTGAAAAAGGCCAGCGGCCGAAATATTCATTAGAAA
GATTATGTGTTTTTTGCTAACTCGTTAATCCTTCTGATTTAGCTTGATAA
CGATAGAAATTGATTAGgtttaaatatattttcagtCGATATTCATTTCG
TTTTGAGGCATTTTGCTTATAGTTTATTTATACCATACCTGATTTTTTNT
ATATTCAGTCGATATTCATTTCGTTTGTTAGGCATTTTGCCTCTGGTTTA
TTTATACCATACCTGATTTCTTTGTAGAGCAAAAGGTGATGACTTGGAGA
GGAGATGTGAAATTGTAAACAGAGAACTCCGTGTCCTGAGTCAAATGAAC
GGTACGCTATAATAAGAAATGTTTTTACTTTAACTACTTCGGTCCTTGAA
TATAATACAGTAAGGCTCACTACTTTTTCGACAGAAATTCAATACACAgg
ctgcaaaattaaagtctgaagacaaatcacgcttttactcgaaattttta
tgtgcttgttacatgacatttatttctgattggttcgaattcaTTGACAC
ttataaagttatcagctgtaaagTGTAAATTCCCAAGCATGGGAATagaa
tcacgtgaactttttcgagtaattacatgttttgactgcattgattaTAA
TTTTGCGATCCTTGTATTGCAAATGTACTCTAGGAAAACTCACATCCTAG
CCTTCAGTTCTTTTAGAATGCTTCTAGATAAATCTTCTAAAGCTGTGGAT
ATTATAGACAGTATCAAAGTGCTCTACATTGTTGATCTGAGGCTATcgtt
tgacaaaaaaattagcAGGGTTTTTGAATGATTGATTctgtaatttcttt
atttttaagaagaGTCCCTTTTTCGCTTAGTTGggaaatttgaatcccga
aACAAAACAATCTGTACTGCAGTTTATTGGGAGTTGTGAGAGTGACGTGA
TTTGGTCGTTCATCACGAGTGTAGATTTGAGTACAATAGTTGGACATTAT
AGTCCTGTAGAACTTTGTCGAAAATAGAgtcaacctagaaaaaattCGAA
TAGAAGGTTTCtttacaccgttggaaagataattttatcagctttcgAAT
GTGGGGTAGAGTCAATTTACCTTATATTCACCTTACATTACCAATATGAT
AACAGGGGTTTTAAACGAATctatgatgattttttttttagaatgggAGA
AAACAGAGGAGATCCGGTTGCGGGAAGACAATCTATTATCACAACTTGTG
ACACTGGTCAATCAGCGGAATCGACTTGTTCAAATCGAAGACACGCAACT
TCAACAAAGGTATTATCCTTTGTAAATTGTATCATTCACCCCGTGACCAA
AAATGTTATTCGAATATGATAAAGATTTGAATTACATAGTAATTTAAATC
GCTTTTCAGCTGAGGGCCCTCAATCTCttagtttgaattacagaaagttt
CGAATGATTGAAGTTCGGATTATAGAGAATTGACTGAGAATCTACGACCT
AAGAATCGAACCAGGAATCTCTTGCACCTTTTGACTTCGCATATGGCTat
cgtgacgtcataatttcttATTCTCATTTTCCAGTGTTCACGACGAAGAG
CATGTGCAAACAGTGCTCCAACAACAAACATCTTTCAATCAGAAGAACAC
CACTGTTGGTAATGTTGTTGGATGGGTCAAAGGATTCAAATCTAAGGTTA
GTATTTCCCGGTTGTACTTTTTATCCTCTGACATTTTGCTGTAAAGAGTG
ATCTCTATTTGTTCCTTCCCTGTATGTGTAGAACAAAAATCATCAATCAT
TCTCGAAAGTCCTTTTAAGTGAGTAAGTCTTTCAATCGCAGTCGGGGGCG
TCCCGAAGGCTCTtcttctttcgatagctatctaccggAAGGTAGGGGAT
GGCGCCACTTTTCCTCCCTGAATCGCTCCACTAACCCTTCTTATTTATTG
CTGAGCATtgagcagagaggcatcaagtaccattttggaaatcctTGGTA
TGACCCGGCAGGGCCATAAAACGGCCGCTAAAGTCCTTCTTTTACTTCAC
TCCTCTTATCTTCCGTAGTCGTAGACCTTTTATAGCTAATCCACAGGAGA
CTTTCTAAAGTCACCTTAAAATAAGCCCTTTTAAGGGATTGAAATTTCAC
AAACAGAGCCAGAAAGTAACCTGCGAAGATCGATGAAAACTATATTACAA
TCAAACGAATCTTATTTTGTGAACTTCTCAACGGGCAAGCTATAatagaa
atgaaataaaattaataaaatggTGAGCGCAGAACTGAGCGCTATCATCT
CATATATATGTAATCCTGAAGAAATGTATATTAAGTCGAAATTGTTGAAT
AATTTGAAGTTTGGGACCAAGATGTTCATGGTAAATAAAATTGGGAACcg
aaaagaaaagtgaaaatggAAAATTAAGTAGACCTCCTTTTTTGTACCTT
TAAAAAAAGTATGTAATATGTTTTTGATTTATTCTGTTTgagtttcgatt
tttttcctcttcattttttctattgttttgttttttcacgTTTAGTTTTG
GTGATTTGTTGATTATGGTTTAATAAATGGACCGAAAGTGTTGGATGAGT
TTTTCGTTGGAGAAGAAATCCTCAATCTTGGTGATTGGAGGAAAATGGTG
TTCCCTGAATATAATGGAGGTCATTCTTTTATCAACGGGTGACCGATTGA
AAAACATGACTAGAGTTTTTGAAATAGGCTTTCTTCTTATTTGCAAGCTA
TTGTTATGACCTTGGTTTTTTATTGGCTCGTGGTCCTAAGCTTGATTAAG
CTGGTcttaaatttactaattttcaagatgtttaTCTGgcagggtcgact
tttggtaaTTGTTGACAaatttcagggtggaaattagaaacttttcaatt
ttttgtctaTTGTTAGTCATTTtggccacttttcagggtgaaaatgggaa
aatgtttcattttttttgacagggtcccaaatttatgAGATATTCATATC
TGACATGGTCTATTTTTTCAAACTCAAGCGGCACGTCCCTGTCGGCCggc
aaggtcagtgccccctcCCCCTCCGGGTCTCTCCCTAATCAATATTTTAA
GTGGGAGAATGGATGACCTCTCAGTGAATGCATGTTGAGTGGTTGTCATA
TTGCTAAGCTTTGTGTAATAGATGTGTTTCATTTTGGATGTGGGTGCAAT
ACACCATCATTGAAGATCaagtttatttttggaaaatacgaagtttaatt
tcgcgaactggtaaagaacattttagacTTATTTATGGCCTTTTCACGAT
AGAAGAAGGCCGATAAAGATTGGTTGTTTTGGATAAAATGtagttttctt
tatttcttaagATATCTAAATACCtagataatgtttttttattttctttt
ctttctttaaaggttttgtttttaaataagagtgatatcgtttgcttact
catcaattttaatttacaagttttttatacTGAATTGACACGGacgtgga
gcaagattgattagaaagagggaaagaaaaacatttttttgcttatatcc
gCACAATNgcaatgtccagggggtaaattgcaatgtccaggggtaatttt
ttgtgtccacggggttgatttgatgtttgtccaggggtataacccgtgtc
cagggggttaaaaatgaaaatgtccaggggtaattcatgaaaaaaataat
atatcctccac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004797XLOC_004797Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008572-exon-sc0000086-1491911889:788158..788269TCONS_00008572-exon-sc0000086-1491911889:788158..788269Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1510915933:788158..788269TCONS_00008572-exon-sc0000086-1510915933:788158..788269Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1575043694:788158..788269TCONS_00008572-exon-sc0000086-1575043694:788158..788269Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1491911889:789295..789386TCONS_00008572-exon-sc0000086-1491911889:789295..789386Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1510915933:789295..789386TCONS_00008572-exon-sc0000086-1510915933:789295..789386Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1575043694:789295..789386TCONS_00008572-exon-sc0000086-1575043694:789295..789386Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1491911889:789806..789880TCONS_00008572-exon-sc0000086-1491911889:789806..789880Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1510915933:789806..789880TCONS_00008572-exon-sc0000086-1510915933:789806..789880Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1575043694:789806..789880TCONS_00008572-exon-sc0000086-1575043694:789806..789880Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1491911889:790200..790301TCONS_00008572-exon-sc0000086-1491911889:790200..790301Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1510915933:790200..790301TCONS_00008572-exon-sc0000086-1510915933:790200..790301Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1575043694:790200..790301TCONS_00008572-exon-sc0000086-1575043694:790200..790301Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1491911889:791170..791479TCONS_00008572-exon-sc0000086-1491911889:791170..791479Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1510915933:791170..791479TCONS_00008572-exon-sc0000086-1510915933:791170..791479Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1575043694:791170..791479TCONS_00008572-exon-sc0000086-1575043694:791170..791479Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1491911889:792105..792215TCONS_00008572-exon-sc0000086-1491911889:792105..792215Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1510915933:792105..792215TCONS_00008572-exon-sc0000086-1510915933:792105..792215Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1575043694:792105..792215TCONS_00008572-exon-sc0000086-1575043694:792105..792215Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1491911889:792652..792848TCONS_00008572-exon-sc0000086-1491911889:792652..792848Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1510915933:792652..792848TCONS_00008572-exon-sc0000086-1510915933:792652..792848Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1575043694:792652..792848TCONS_00008572-exon-sc0000086-1575043694:792652..792848Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1491911889:793165..793200TCONS_00008572-exon-sc0000086-1491911889:793165..793200Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1510915933:793165..793200TCONS_00008572-exon-sc0000086-1510915933:793165..793200Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1575043694:793165..793200TCONS_00008572-exon-sc0000086-1575043694:793165..793200Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1491911889:794059..794179TCONS_00008572-exon-sc0000086-1491911889:794059..794179Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1510915933:794059..794179TCONS_00008572-exon-sc0000086-1510915933:794059..794179Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1575043694:794059..794179TCONS_00008572-exon-sc0000086-1575043694:794059..794179Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1491911889:794575..794671TCONS_00008572-exon-sc0000086-1491911889:794575..794671Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1510915933:794575..794671TCONS_00008572-exon-sc0000086-1510915933:794575..794671Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1575043694:794575..794671TCONS_00008572-exon-sc0000086-1575043694:794575..794671Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1491911889:795185..795258TCONS_00008572-exon-sc0000086-1491911889:795185..795258Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1510915933:795185..795258TCONS_00008572-exon-sc0000086-1510915933:795185..795258Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1575043694:795185..795258TCONS_00008572-exon-sc0000086-1575043694:795185..795258Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1491911889:796099..796216TCONS_00008572-exon-sc0000086-1491911889:796099..796216Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1510915933:796099..796216TCONS_00008572-exon-sc0000086-1510915933:796099..796216Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1575043694:796099..796216TCONS_00008572-exon-sc0000086-1575043694:796099..796216Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1491911889:796492..796603TCONS_00008572-exon-sc0000086-1491911889:796492..796603Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1510915933:796492..796603TCONS_00008572-exon-sc0000086-1510915933:796492..796603Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1575043694:796492..796603TCONS_00008572-exon-sc0000086-1575043694:796492..796603Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1491911889:797453..798618TCONS_00008572-exon-sc0000086-1491911889:797453..798618Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1510915933:797453..798618TCONS_00008572-exon-sc0000086-1510915933:797453..798618Clytia hemisphaericaexon
TCONS_00008572-exon-sc0000086-1575043694:797453..798618TCONS_00008572-exon-sc0000086-1575043694:797453..798618Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:788158..798618 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	9.44553e-09	0	0	0	0	0	0	0	2.65843e-06	1.92195e-08	0	0	0	0	0	0.149197	1.03134	2.43638e-06	0	3.34096e-07	0.00159095	0	1.18931e-07	0	0	0.542795	0	5.72673e-10	0
Blast
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BLAST of TCONS_00008572 vs. Swiss-Prot (Human)
Match: EHBP1 (EH domain-binding protein 1 OS=Homo sapiens GN=EHBP1 PE=1 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 7.021e-30
Identity = 73/156 (46.79%), Postives = 102/156 (65.38%), Query Frame = 1 
Query: 1021 ELENFNLKSADEYYHNELAQLEQETKALDLVAQKLELELRKAMDAG-DQEGEEDLLQEWFNLVNKKNEIIRRQNEIALLAKGDDLERRCEIVNRELRVLSQMNEWEKTEEIRLREDNLLSQLVTLVNQRNRLVQIEDTQLQQSVHDEEHVQTVLQQ 1485
            E+ N   K   +Y   ELA LE E K +D  A  +E  LR  MD G + E EE ++QEWF LVNKKN +IRR N+++LL K  DLERR E++NRELR +  + +W+KTE  + RE  LL +LV LVN+R+ LV+  D Q +Q+  ++EH++  L+Q
Sbjct: 1061 EVLNKGFKDTSQYVVGELAALENEQKQIDTRAALVEKRLRYLMDTGRNTEEEEAMMQEWFMLVNKKNALIRRMNQLSLLEKEHDLERRYELLNRELRAMLAIEDWQKTEAQKRREQLLLDELVALVNKRDALVRDLDAQEKQAEEEDEHLERTLEQ 1216
The following BLAST results are available for this feature:
BLAST of TCONS_00008572 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EHBP17.021e-3046.79EH domain-binding protein 1 OS=Homo sapiens GN=EHB... [more]
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