|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071185 ID=TCONS_00071185|Name=TCONS_00071185|organism=Clytia hemisphaerica|type=transcript|length=687bp TTCGGATTAACAAAATCCGGAGCTCTTTTGATGGAGTACATCTCCTCAAA TGCAAACCGCCTCACCAGTTCAACCACGTTAAGATCGATATTGAAGTCTG GGCAGTATAAAAAGAAGATTTGGTTCGACATATGTAGAAAGTTAGTTGAT GCTTTATCCTTTATGTACGATAAAGGGCTACTCCACAATGATCTCCACAG TGAGAACATTTTGATTCGAAGTAACAAACAACCGTGTATAATTGATTTCG GAAAATGTACCCTTGTGAATTCACCATTTCATTATAATATCAAGGCTGGA TCTAAAGAGCAGCTTAAATTCAACACGTACCACATTCACTTGGCCACCGA ATTAAGGAACGTGCCAAATTCTCCCCAGACTGTCTACACAGACATATACT CACTTGGCTTCAATTTCGCCAGCATTGGGAAATTTCAGAACATTGAGGAC ATTACTAAACTGGCGAAACGAATGACAGTTGAAGAACCCTTAAATCGGTA CGATCTGATGGATTGCAATGTCAGTTTGTTAAAGTACTAGattttattag atttttatAAGGATTTTACCTTTTTTACGTCAAACAAAAAGTACTTTAAT GTGATTAAAGTTTGTGGGCACCATCAGAAgataatatttttactttttac tttcaaaCATTACGTGTTGGTTCTTGAAATACCTTTG Run BLAST on NCBI protein sequence of TCONS_00071185-protein >TCONS_00071185-protein ID=TCONS_00071185-protein|Name=TCONS_00071185-protein|organism=Clytia hemisphaerica|type=polypeptide|length=179bp
FGLTKSGALLMEYISSNANRLTSSTTLRSILKSGQYKKKIWFDICRKLVD ALSFMYDKGLLHNDLHSENILIRSNKQPCIIDFGKCTLVNSPFHYNIKAG SKEQLKFNTYHIHLATELRNVPNSPQTVYTDIYSLGFNFASIGKFQNIED ITKLAKRMTVEEPLNRYDLMDCNVSLLKY Run BLAST on NCBI transcript from alignment at scaffold_6:6111..6797 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071185 ID=TCONS_00071185|Name=TCONS_00071185|organism=Clytia hemisphaerica|type=transcript|length=687bp|location=Sequence derived from alignment at scaffold_6:6111..6797 (Clytia hemisphaerica) CAAAGGTATTTCAAGAACCAACACGTAATGtttgaaagtaaaaagtaaaa
atattatcTTCTGATGGTGCCCACAAACTTTAATCACATTAAAGTACTTT
TTGTTTGACGTAAAAAAGGTAAAATCCTTataaaaatctaataaaatCTA
GTACTTTAACAAACTGACATTGCAATCCATCAGATCGTACCGATTTAAGG
GTTCTTCAACTGTCATTCGTTTCGCCAGTTTAGTAATGTCCTCAATGTTC
TGAAATTTCCCAATGCTGGCGAAATTGAAGCCAAGTGAGTATATGTCTGT
GTAGACAGTCTGGGGAGAATTTGGCACGTTCCTTAATTCGGTGGCCAAGT
GAATGTGGTACGTGTTGAATTTAAGCTGCTCTTTAGATCCAGCCTTGATA
TTATAATGAAATGGTGAATTCACAAGGGTACATTTTCCGAAATCAATTAT
ACACGGTTGTTTGTTACTTCGAATCAAAATGTTCTCACTGTGGAGATCAT
TGTGGAGTAGCCCTTTATCGTACATAAAGGATAAAGCATCAACTAACTTT
CTACATATGTCGAACCAAATCTTCTTTTTATACTGCCCAGACTTCAATAT
CGATCTTAACGTGGTTGAACTGGTGAGGCGGTTTGCATTTGAGGAGATGT
ACTCCATCAAAAGAGCTCCGGATTTTGTTAATCCGAA Coding sequence (CDS) from alignment at scaffold_6:6111..6797 >TCONS_00071185 ID=TCONS_00071185|Name=TCONS_00071185|organism=Clytia hemisphaerica|type=CDS|length=540bp|location=Sequence derived from alignment at scaffold_6:6111..6797 (Clytia hemisphaerica) CTAGTACTTTAACAAACTGACATTGCAATCCATCAGATCGTACCGATTTA AGGGTTCTTCAACTGTCATTCGTTTCGCCAGTTTAGTAATGTCCTCAATG TTCTGAAATTTCCCAATGCTGGCGAAATTGAAGCCAAGTGAGTATATGTC TGTGTAGACAGTCTGGGGAGAATTTGGCACGTTCCTTAATTCGGTGGCCA AGTGAATGTGGTACGTGTTGAATTTAAGCTGCTCTTTAGATCCAGCCTTG ATATTATAATGAAATGGTGAATTCACAAGGGTACATTTTCCGAAATCAAT TATACACGGTTGTTTGTTACTTCGAATCAAAATGTTCTCACTGTGGAGAT CATTGTGGAGTAGCCCTTTATCGTACATAAAGGATAAAGCATCAACTAAC TTTCTACATATGTCGAACCAAATCTTCTTTTTATACTGCCCAGACTTCAA TATCGATCTTAACGTGGTTGAACTGGTGAGGCGGTTTGCATTTGAGGAGA TGTACTCCATCAAAAGAGCTCCGGATTTTGTTAATCCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00071185-exon-scaffold_6-1491911889:6111..6797 | TCONS_00071185-exon-scaffold_6-1491911889:6111..6797 | Clytia hemisphaerica | exon |
TCONS_00071185-exon-scaffold_6-1510915933:6111..6797 | TCONS_00071185-exon-scaffold_6-1510915933:6111..6797 | Clytia hemisphaerica | exon |
TCONS_00071185-exon-scaffold_6-1575043694:6111..6797 | TCONS_00071185-exon-scaffold_6-1575043694:6111..6797 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_6 | supercontig | scaffold_6:6111..6797 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0004672 | protein kinase activity |
GO:0005524 | ATP binding |
Vocabulary: Biological Process
Term | Definition |
GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0006468 |
protein phosphorylation |
molecular_function |
GO:0005524 |
ATP binding |
molecular_function |
GO:0004672 |
protein kinase activity |
Blast
The following BLAST results are available for this feature:
|