TCONS_00063598 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063598
Unique NameTCONS_00063598
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1981

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063598 ID=TCONS_00063598|Name=TCONS_00063598|organism=Clytia hemisphaerica|type=transcript|length=1981bp
CTAGCACCGATAACTAAACCTACGTAGTCAGTAGTACCTTCAACTGTTCA
AAGCAAAAATGGAACAGCCAAAAAGCAAATAAATTATTCCAATTCTGCAC
ATTTTGCTCACCGCAACTCGGATACCATTTTAGTAAATTATATTTGCCGA
AACAGCTTTTGCACTAAAatctttgtttacaatttttttcggaaataaac
ttcaaaaagaaaaaaattagatatttcGGACTAATTGCCAGCCTGAAAAA
ATTCCGATTAATTCGATTCGTTCTCAGTCTCCTTTGTTTGAAGTGGGATT
CCAATTTTCGGCGGAGCACAACTTGTGAACAgagaaatcatcaaaatttg
accaaaaagttCACCTTTTCTAACTAAAAATGAGTCGTTACAAGCTTTTT
CTCGGTCATCTATCACCAGATGCAAGAACTCGTGATGTTGAAAGATTCTT
TAAAGATCATGGGTTTTCTAAATCGATTGTAGAAGTCGTTGTGAAAACTG
GATATGGCTTTGTCatttttgacGACAGAAGAGATGCAGATGATGCAATC
TATGAATTAAATGGAAAGGAGTTACTTGGCGGAAGACTTCAAGTTGAATT
CGCAAAGCCGTCTGGGAGATTCGAAGACAGAGATGGCGGTGGTCGTGGAC
GTGGTGGAGGCTATGGTGGTAGTGGTGGTGGCGGGGGTGGGGGTTACAGA
TCAGATAGAGATCGAGGCGGACGCGGTGGTGGTGGCGGCGGCGGAGGTGG
AGGCTATGGTCGTCCATACAACACAGAATACCGAATTATTGTTGAAAATC
TATCAACTAGAGCAAGTTGGCAGCATTTGTTGTTGTGCACTTAAGTGTTG
TTGGCCAGTTCTAAGAATTGGtgtaaatgaatgaatgatttGTGTAGTGG
GTGTTGCGCTTGTATGGTGGCCAATGCCAAGTTTGTGTGCCCAAAATCTA
ATAAGATATGTGTTGGGTGAAATGTGATACTTGGCTTAAGAATTTCTGAT
TTGGTGGCTGAAATATGTCAATCCGGGAAGATGAAATGCTCTCTGGGTGG
ATTTTGGCAAAATTCAATTAAGAATTTCTGGTGGCTATGTCTGGAATGTC
CTTGTGCAATCCAGGTTTATACATGACATGGCTACTAAATTGGCTGGTCT
TGCTCTTCTTTGCCTTGGCTGGGttgtttttgctttttgttaattttgag
cAGCAGAGGATCTTAAAGATTACTTCAGACAAGCTGGTGAAgtaactttt
gcaaaatgccaTAGAGAAAAGATGGGAGAAGGTGTTGTTGAATTCGCAAA
CAAGTCAGACATGAACAACGCCATGAGAAAACTTGATGATACAGAGCTTT
TTGGAAAAAGAGTAAAACTCATTTGTAATTTCTCTGGTTCACGATCACGC
AGTCGTAGTCGTTCACCTCGTCGTCGCTCGTTCTCCCGCTCACCACAACG
CGGTCGCTCACGATCTCGAAGTCCACGAAGGAGCTTCTCGAGAAGTCCTC
AAGCTCGACGATCATTCTCTCGCTCAAGATCCAGATCACCTCGTTGAACT
CTTTTTTAGATATTCTAAGATTCTTTGCATTGTCATTTAGTATAACAACA
CCTTTATGTTATTACTTTTAGGGCTAGATTTTTGTGAATATTTACTTTGA
CCTCTCGCTACTGATTgatgattttatcaattttatataaaaacttttag
aaaaacattgaaaatagtGTACACTTTATATTACCTTTTCTTCCTGTGTA
TCACCCAAGCTGAGGAATTCGTCATTCGTGTATTTTCCTCATTTCactca
aaataatataatactgGTCACATTGAAATTGATTTCTCTTCTATGGTGTT
AACTATTTTTGTCATCTACTTTTCAGATAAATCTTGTTTCCAGGGGTACC
CAAAAAGGGTACAAAACTTTTCAGATCGAATGCTTAATTGCTTATAAAGT
GGACTTCCTATCCTTGGGTACAGATGGGTTG
Run BLAST on NCBI

protein sequence of TCONS_00063598-protein

>TCONS_00063598-protein ID=TCONS_00063598-protein|Name=TCONS_00063598-protein|organism=Clytia hemisphaerica|type=polypeptide|length=154bp
MSRYKLFLGHLSPDARTRDVERFFKDHGFSKSIVEVVVKTGYGFVIFDDR
RDADDAIYELNGKELLGGRLQVEFAKPSGRFEDRDGGGRGRGGGYGGSGG
GGGGGYRSDRDRGGRGGGGGGGGGGYGRPYNTEYRIIVENLSTRASWQHL
LLCT
Run BLAST on NCBI

transcript from alignment at scaffold_394:104016..110375-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063598 ID=TCONS_00063598|Name=TCONS_00063598|organism=Clytia hemisphaerica|type=transcript|length=6360bp|location=Sequence derived from alignment at scaffold_394:104016..110375- (Clytia hemisphaerica)
CTAGCACCGATAACTAAACCTACGTAGTCAGTAGTACCTTCAACTGTTCA
AAGCAAAAATGGAACAGCCAAAAAGCAAATAAATTATTCCAATTCTGCAC
ATTTTGCTCACCGCAACTCGGATACCATTTTAGTAAATTATATTTGCCGA
AACAGCTTTTGCACTAAAATCTTTGTTTACAATTTTTTTCGGAAATAAAC
TTCAAAAAGAAAAAAATTAGATATTTCGGACTAATTGCCAGCCTGAAAAA
ATTCCGATTAATTCGATTCGTTCTCAGTCTCCTTTGTTTGAAGTGGGATT
CCAATTTTCGGCGGAGCACAACTTGTGAACAGAGAAATCATCAAAATTTG
ACCAAAAAGTTCACCTTTTCTAACTAAAAATGAGTCGTTACAAGCTTTTT
CTCGGTCATCTATCACCAGATGCAAGAACTCGTGATGTTGAAAGATTCTT
TAAAGATCATGGGTTTTCTAAATCGATTGTAGAAGTCGTTGTGAAAACTG
GATATGGCTTTGTCGTAAGTCTTTTTCTCTGCAAATAGATAGTTTTTTTC
TTCGAAAAGGTTTGCATATTCCTAATCAAGTCCGACTTTTCTTGGGCATT
TCACATGTTCTTCAATGGATATATTTTTTGATGATCTAATCTTTAAATGA
AAGGCTATTCCATTCTTAAACCAGGCAAGGGCATCGGTAGACAGGACACC
TGTCCTGTATTTTTATAATCTGACATATACAGGACAGGTACGAGCTGTGA
GGCAGATTTCTGCCTCAAAAAACTTACAATGGGAAATTCGAAATAGTGCT
GTCCTCTTTTACTAAAATAAAAACCATATCATGGATCCCTAGGCTAGGGT
ATCGGCAACCCTTTCCAGAGGGGGGACTGAGCTTGGCTTTTCTAAGGGGT
TTAGTCACTTATTTATTATATTCACAGGGGATCATTGGAAGTTTGCAGGT
CCTTCCAAGTGTCAACAAAGATTTAGAGGGGCTCTTTCCTCACAAGCTGG
CATAAATAGTTTCCCATAGCGGCATAGGGTTTCACCCACAAATCTCCCAC
GTGCGTTTGGTTTGGGAACGCGAAACACGAATGCGAACTACCCATGTCTA
AACTTTTCAATATATCTCCAAAACTAACAGACTTTTTGAAATTCTGTAAA
AAGGTCCAAGTTCCTGAATAGTTTTACTATGTTCTGTGAAAAAATCATAA
GGCGACCGCCTGCATGCTCTTAAGCCGCCGCTCAAAAAAGTTCATTATTT
CTTAAAAACTCATTATTTTCTTCTTTTCCTGTGCCAAGCTATCCAAAACA
CTCAAAGTGAATCAAAAATAACATCTTCGCTAACAAAATGTGCGCCTCGA
GTAAGAAATATGGTTCCAATCACGTCCGCGAATGGGGTGGGGATTTTTTT
AAGCAGTGGGCGGCATCAAGGGCGTTTTAGAAATTCGCGTTTTAGACGCG
TCTCGAACGCGTTTGAATTTTGCGCGTATGTTATTTTGATTTCGAAAGTG
AAAGCAGCTCGATTTCACGGTGGAATTCAACTTCGTTGGAGATTGGAAGC
ACCAGTTAGGAATAATGAATAATGAAATTTTGCCGCATCAAATATTTTTT
GAAACGCGACGGTAAACAGAACATCAAATTCCCATCGCCTAACCATCAGT
CAAATACGCGTTCATCTATTTAAAGATTGAAGACAAAAATTGCGAAGAAA
AATAAACCTTGAGCACAAAAAATGCTTTTTAAACACTTTTTTCCACCGAA
AAACAAATAACTTTTATAGACTTACCTTCCCCAAACATTGAAGAAGCCTC
TGCTAATCAAAGTAAATGAGATAAGATAAGATAAAACCTTAAAATCAACC
AGAATTTACAACATTTCGTTCAAAGCAAAAGACATGCTTTTCTCGCCGCC
ATCTTGTTTTAGAATGAGAATTATTTTCGGTTCCAGTTCCCACGGTCTTT
TTTTCATCCAATCAGATCGCGCGATTTCACTTTCGCTTTCTCTAGTCCAA
TAAGACTGCGGGATTTGAGTCATGTGACATCTCTATTGAAAAACCCTCGC
GGAATAAAATAGAAATACAGGGGGTCACACTACTGGCTACAGGAACTGAA
AGCAAACAATTTTAAGGCCAATATTTTTGGTTTTTCTGAAGGACAAAAGG
TATAGGAAGCTTTACTGAAAGAGGGATAAGGCTGGGGCTATCTATTTAAA
AGAAATGGACAAAAAAAGGCACTATTTTGGGTGATAATTAAGATTTTACT
TAGAAACTTTAATTCTCTTACCCCCGTCTCGGGCCCCCCTGATATGAGCA
GGTGAACCATGTTGGCCACCCCTACTGAAAATTTCAGATCAAAACAAACA
ATGAATTAATTCCTGTAACTCGATGAAAATTGGAAAAAGCTGGTTTTGAT
TGTTTCTGATCTTTTTGGTAAAAGCTATGCAATTTATGTTTGGATTTCTA
GAAAGCCTACCCATTCATTGTCAATATATTTTTTATTTGAAAGTAATTTG
TTGTTCAAAAGTGGATTAGCGGCAGATTAGATTAACTTTTCTCAACTTCA
GTTGAGTTAGAATCTGAGAATGTGTGTGTGTGTGTGTCTGTGTGTCTGTG
TGTGTGTATGTCCCAAAACTTTGGGGCAGCCTGGAGACTTCAAAAATTGT
TTGATTTGGCTGAAATTTGGCACACTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNGTGAATATCTGGGGGTGCTTTTTGCATTTTTCAAAAATTTAGATTTTT
GGGGCCTAGGGACGAGTTTTTTGCCAAGACGAGGCTAAAGCTTTGAAGTA
GCCTACAGCCCTCCAAAATGGTCGGATTTGGTTGAAATTTGGCACACTTG
TTCATTGGGTAAATATCTGGGGGTCTACAATTGGGCCTATGAATCATTTG
AAGCCACTGAAGTTGAGCCCAGTGCGTTGCGCACGTTCGACTATTGATTA
TTAAATCCCGATTAGTACAGTACCACTGGTGTTAAAAAATTAGGCATGAA
TCTGGATCAATTTCCGATTAAATAAAAAGGCAAAATTTTAATCCTGCTCT
GACCCAGGATTAGCTCAGGATTTAATCTAATCAACTTTTGAACAACCAAG
CAGAACCAAGCCAAGAGGATAATTTTCGGTTCAAAATTTCCAGGGGTTGG
TAAAAACTTTGTCAATACCCTCTGTTTAATTTGTTTTTGGAATTAGCCCA
ATGAAACACAAATAAAGAATTACTACTAAGCGAGTTACTTTGATTTTGAG
TCCATCTTGCAGTTAACAATATAAAGTCCCTCTCCAAAAATCAAATTTCT
GAAATTTTCTTTTAGATTTTTGACGACAGAAGAGATGCAGATGATGCAAT
CTATGAATTAAATGGAAAGGAGTTACTTGGCGGAAGGTATTATATTCAAG
CAAGTTCCCCTTGGAAGCCAAAAAAGCTCTTTTTATGCTTTTTTTTTATC
ATGAAAAAGGCTCATTTTACAATTATTCTTTAAACTTTAGAAAGGCACTG
TCTGATGACCAGACCCTGAAAGTGTCATGAAAAGTGATTTGACAGTTTTT
TCATATTTGGTACTGTTTTGGTGTAACTATTCATTCTCTTTCAGACTTCA
AGTTGAATTCGCAAAGCCGTCTGGGAGATTCGAAGACAGAGATGGCGGTG
GTCGTGGACGTGGTGGAGGCTATGGTGGTAGTGGTGGTGGCGGGGGTGGG
GGTTACAGATCAGATAGAGATCGAGGCGGACGCGGTGGTGGTGGCGGCGG
CGGAGGTGGAGGGTGAGTTATAATTTCATTATTGGACACACATGCCATTG
TTTACAAAGATATCTTACCATTGACCAGTTCTGGCTCTGGACAGTTTAAC
ATTCAATGTGGTATCGCTGTCATCCATTTTATGATGAATTTATTCAAATA
CTTTCCTTTACAGCTATGGTCGTCCATACAACACAGAATACCGAATTATT
GTTGAAAATCTATCAACTAGAGCAAGTTGGCAGGTAAAATTTATCTGTAT
GATTTTTATATCAAGGATATTAATTTTCATTGGCTTTAACTGACCACTAA
AATAGAAATTGCTTTGTTCTGTTTTTAAAAGTTTTAGCTTGAGAAATTAT
TAAAAAGATTTACCTTTTTTAAGAAATTTTAAGGTTGTTAAATTTTATAC
CAACTAGACATACTCCTTGCTTTCACTAGATTTTTGAATACTATTAATTT
TAATTTTCAATCCTGGATTCCCTTTTCTAGCATTTGTTGTTGTGCACTTA
AGTGTTGTTGGCCAGTTCTAAGAATTGGTGTAAATGAATGAATGATTTGT
GTAGTGGGTGTTGCGCTTGTATGGTGGCCAATGCCAAGTTTGTGTGCCCA
AAATCTAATAAGATATGTGTTGGGTGAAATGTGATACTTGGCTTAAGAAT
TTCTGATTTGGTGGCTGAAATATGTCAATCCGGGAAGATGAAATGCTCTC
TGGGTGGATTTTGGCAAAATTCAATTAAGAATTTCTGGTGGCTATGTCTG
GAATGTCCTTGTGCAATCCAGGTTTATACATGACATGGCTACTAAATTGG
CTGGTCTTGCTCTTCTTTGCCTTGGCTGGGTTGTTTTTGCTTTTTGTTAA
TTTTGAGCAGCAGAGGTACAGTAAAGTGTCAAAGATACTTGTATTTCTCA
TGTTCTATAAAAAAGTTCTCATTCAAATAATCTTTTCAAGCAAGCCAACT
CAAATCAGGTTCATTTAAGGCTTTTGCATTATCTTTATTCTATCTATAAC
CGAGTGTCATAAATTTTTCACTTCAGGATCTTAAAGATTACTTCAGACAA
GCTGGTGAAGTAACTTTTGCAAAATGCCATAGAGAAAAGATGGGAGAAGG
GTAAGTGGACCGACCATAATTGGACCTAGGACAGCCGAGGAAACCCCTAG
GAAAATAAGGAATTTGGGGAGAAAAAGTCCACTGAAGGTAATCCCATCAA
GGCTATCCATTGTAAATTTTATGAATTTGAAACTCGCCAACCAATTTGTG
GTCCAAACCTTCATTGAAGCTGATTTTGTTTATCTATTTTCAGTGTTGTT
GAATTCGCAAACAAGTCAGACATGAACAACGCCATGAGAAAACTTGATGA
TACAGAGCTTTTTGGAAAAAGAGTAAAACTCATTTGTGTAAGTATCAATT
TTCAAATTTTTTCAAAAACTATTTAATTGCTTGTAAAGAAAACATTCTGA
CAGATTCTGACGATAGTTTCACACTAGTACTGTTTCACCTCTTACTCTAG
ACACTGTAACTGTAAAAACAAAAAATAATTCGCATTTATTTTTTTCAAAC
CTTAGAATTTCTCTGGTTCACGATCACGCAGTCGTAGTCGTTCACCTCGT
CGTCGCTCGTTCTCCCGCTCACCACAACGCGGTCGCTCACGATCTCGAAG
TCCACGAAGGAGCTTCTCGAGAAGTCCTCAAGCTCGACGATCATTCTCTC
GCTCAAGATCCAGATCACCTCGTTGAACTCTTTTTTAGATATTCTAAGAT
TCTTTGCATTGTCATTTAGTATAACAACACCTTTATGTTATTACTTTTAG
GGCTAGATTTTTGTGAATATTTACTTTGACCTCTCGCTACTGATTGATGA
TTTTATCAATTTTATATAAAAACTTTTAGAAAAACATTGAAAATAGTGTA
CACTTTATATTACCTTTTCTTCCTGTGTATCACCCAAGCTGAGGAATTCG
TCATTCGTGTATTTTCCTCATTTCACTCAAAATAATATAATACTGGTCAC
ATTGAAATTGATTTCTCTTCTATGGTGTTAACTATTTTTGTCATCTACTT
TTCAGATAAATCTTGTTTCCAGGGGTACCCAAAAAGGGTACAAAACTTTT
CAGATCGAATGCTTAATTGCTTATAAAGTGGACTTCCTATCCTTGGGTAC
AGATGGGTTG

Coding sequence (CDS) from alignment at scaffold_394:104016..110375-

>TCONS_00063598 ID=TCONS_00063598|Name=TCONS_00063598|organism=Clytia hemisphaerica|type=CDS|length=2325bp|location=Sequence derived from alignment at scaffold_394:104016..110375- (Clytia hemisphaerica)
CATTTGTTGTTGTGCACTTAACTATGGTCGTCCATACAACACAGAATACC
GAATTATTGTTGAAAATCTATCAACTAGAGCAAGTTGGCAGACTTCAAGT
TGAATTCGCAAAGCCGTCTGGGAGATTCGAAGACAGAGATGGCGGTGGTC
GTGGACGTGGTGGAGGCTATGGTGGTAGTGGTGGTGGCGGGGGTGGGGGT
TACAGATCAGATAGAGATCGAGGCGGACGCGGTGGTGGTGGCGGCGGCGG
AGGTGGAGGATTTTTGACGACAGAAGAGATGCAGATGATGCAATCTATGA
ATTAAATGGAAAGGAGTTACTTGGCGGAAGATGAGTCGTTACAAGCTTTT
TCTCGGTCATCTATCACCAGATGCAAGAACTCGTGATGTTGAAAGATTCT
TTAAAGATCATGGGTTTTCTAAATCGATTGTAGAAGTCGTTGTGAAAACT
GGATATGGCTTTGTCCATTTGTTGTTGTGCACTTAACTATGGTCGTCCAT
ACAACACAGAATACCGAATTATTGTTGAAAATCTATCAACTAGAGCAAGT
TGGCAGACTTCAAGTTGAATTCGCAAAGCCGTCTGGGAGATTCGAAGACA
GAGATGGCGGTGGTCGTGGACGTGGTGGAGGCTATGGTGGTAGTGGTGGT
GGCGGGGGTGGGGGTTACAGATCAGATAGAGATCGAGGCGGACGCGGTGG
TGGTGGCGGCGGCGGAGGTGGAGGATTTTTGACGACAGAAGAGATGCAGA
TGATGCAATCTATGAATTAAATGGAAAGGAGTTACTTGGCGGAAGATGAG
TCGTTACAAGCTTTTTCTCGGTCATCTATCACCAGATGCAAGAACTCGTG
ATGTTGAAAGATTCTTTAAAGATCATGGGTTTTCTAAATCGATTGTAGAA
GTCGTTGTGAAAACTGGATATGGCTTTGTCCATTTGTTGTTGTGCACTTA
ACTATGGTCGTCCATACAACACAGAATACCGAATTATTGTTGAAAATCTA
TCAACTAGAGCAAGTTGGCAGACTTCAAGTTGAATTCGCAAAGCCGTCTG
GGAGATTCGAAGACAGAGATGGCGGTGGTCGTGGACGTGGTGGAGGCTAT
GGTGGTAGTGGTGGTGGCGGGGGTGGGGGTTACAGATCAGATAGAGATCG
AGGCGGACGCGGTGGTGGTGGCGGCGGCGGAGGTGGAGGATTTTTGACGA
CAGAAGAGATGCAGATGATGCAATCTATGAATTAAATGGAAAGGAGTTAC
TTGGCGGAAGATGAGTCGTTACAAGCTTTTTCTCGGTCATCTATCACCAG
ATGCAAGAACTCGTGATGTTGAAAGATTCTTTAAAGATCATGGGTTTTCT
AAATCGATTGTAGAAGTCGTTGTGAAAACTGGATATGGCTTTGTCCATTT
GTTGTTGTGCACTTAACTATGGTCGTCCATACAACACAGAATACCGAATT
ATTGTTGAAAATCTATCAACTAGAGCAAGTTGGCAGACTTCAAGTTGAAT
TCGCAAAGCCGTCTGGGAGATTCGAAGACAGAGATGGCGGTGGTCGTGGA
CGTGGTGGAGGCTATGGTGGTAGTGGTGGTGGCGGGGGTGGGGGTTACAG
ATCAGATAGAGATCGAGGCGGACGCGGTGGTGGTGGCGGCGGCGGAGGTG
GAGGATTTTTGACGACAGAAGAGATGCAGATGATGCAATCTATGAATTAA
ATGGAAAGGAGTTACTTGGCGGAAGATGAGTCGTTACAAGCTTTTTCTCG
GTCATCTATCACCAGATGCAAGAACTCGTGATGTTGAAAGATTCTTTAAA
GATCATGGGTTTTCTAAATCGATTGTAGAAGTCGTTGTGAAAACTGGATA
TGGCTTTGTCCATTTGTTGTTGTGCACTTAACTATGGTCGTCCATACAAC
ACAGAATACCGAATTATTGTTGAAAATCTATCAACTAGAGCAAGTTGGCA
GACTTCAAGTTGAATTCGCAAAGCCGTCTGGGAGATTCGAAGACAGAGAT
GGCGGTGGTCGTGGACGTGGTGGAGGCTATGGTGGTAGTGGTGGTGGCGG
GGGTGGGGGTTACAGATCAGATAGAGATCGAGGCGGACGCGGTGGTGGTG
GCGGCGGCGGAGGTGGAGGATTTTTGACGACAGAAGAGATGCAGATGATG
CAATCTATGAATTAAATGGAAAGGAGTTACTTGGCGGAAGATGAGTCGTT
ACAAGCTTTTTCTCGGTCATCTATCACCAGATGCAAGAACTCGTGATGTT
GAAAGATTCTTTAAAGATCATGGGTTTTCTAAATCGATTGTAGAAGTCGT
TGTGAAAACTGGATATGGCTTTGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039859XLOC_039859Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063598-exon-scaffold_394-1575043694:109862..110375TCONS_00063598-exon-scaffold_394-1575043694:109862..110375Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1575043694:106540..106610TCONS_00063598-exon-scaffold_394-1575043694:106540..106610Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1575043694:106164..106331TCONS_00063598-exon-scaffold_394-1575043694:106164..106331Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1575043694:105943..106012TCONS_00063598-exon-scaffold_394-1575043694:105943..106012Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1575043694:105311..105695TCONS_00063598-exon-scaffold_394-1575043694:105311..105695Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1575043694:105076..105149TCONS_00063598-exon-scaffold_394-1575043694:105076..105149Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1575043694:104789..104882TCONS_00063598-exon-scaffold_394-1575043694:104789..104882Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1575043694:104016..104620TCONS_00063598-exon-scaffold_394-1575043694:104016..104620Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1510915933:109862..110375TCONS_00063598-exon-scaffold_394-1510915933:109862..110375Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1510915933:106540..106610TCONS_00063598-exon-scaffold_394-1510915933:106540..106610Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1510915933:106164..106331TCONS_00063598-exon-scaffold_394-1510915933:106164..106331Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1510915933:105943..106012TCONS_00063598-exon-scaffold_394-1510915933:105943..106012Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1510915933:105311..105695TCONS_00063598-exon-scaffold_394-1510915933:105311..105695Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1510915933:105076..105149TCONS_00063598-exon-scaffold_394-1510915933:105076..105149Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1510915933:104789..104882TCONS_00063598-exon-scaffold_394-1510915933:104789..104882Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1510915933:104016..104620TCONS_00063598-exon-scaffold_394-1510915933:104016..104620Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1491911889:109862..110375TCONS_00063598-exon-scaffold_394-1491911889:109862..110375Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1491911889:106540..106610TCONS_00063598-exon-scaffold_394-1491911889:106540..106610Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1491911889:106164..106331TCONS_00063598-exon-scaffold_394-1491911889:106164..106331Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1491911889:105943..106012TCONS_00063598-exon-scaffold_394-1491911889:105943..106012Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1491911889:105311..105695TCONS_00063598-exon-scaffold_394-1491911889:105311..105695Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1491911889:105076..105149TCONS_00063598-exon-scaffold_394-1491911889:105076..105149Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1491911889:104789..104882TCONS_00063598-exon-scaffold_394-1491911889:104789..104882Clytia hemisphaericaexon
TCONS_00063598-exon-scaffold_394-1491911889:104016..104620TCONS_00063598-exon-scaffold_394-1491911889:104016..104620Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063598-proteinTCONS_00063598-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_394supercontigscaffold_394:104016..110375 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.37033	3.11913	7.25262	7.95892	39.1147	27.9188	34.165	37.655	25.6601	27.9111	34.2763	25.7721	39.0929	39.229	40.2345	44.699	48.6397	41.5524	42.2074	32.7542	39.2249	40.0835	32.2401	33.8168	27.8239	27.4413	45.4802	44.1534	33.5547	36.3919
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063598 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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