XLOC_039859 (gene) - C. hemisphaerica

Overview
NameXLOC_039859
Unique NameXLOC_039859
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_394:104016..110399-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039859 ID=XLOC_039859|Name=XLOC_039859|organism=Clytia hemisphaerica|type=gene|length=6384bp|location=Sequence derived from alignment at scaffold_394:104016..110399- (Clytia hemisphaerica)
CTAATGTACTGCAGAAAAAGTAACCTAGCACCGATAACTAAACCTACGTA
GTCAGTAGTACCTTCAACTGTTCAAAGCAAAAATGGAACAGCCAAAAAGC
AAATAAATTATTCCAATTCTGCACATTTTGCTCACCGCAACTCGGATACC
ATTTTAGTAAATTATATTTGCCGAAACAGCTTTTGCACTAAAATCTTTGT
TTACAATTTTTTTCGGAAATAAACTTCAAAAAGAAAAAAATTAGATATTT
CGGACTAATTGCCAGCCTGAAAAAATTCCGATTAATTCGATTCGTTCTCA
GTCTCCTTTGTTTGAAGTGGGATTCCAATTTTCGGCGGAGCACAACTTGT
GAACAGAGAAATCATCAAAATTTGACCAAAAAGTTCACCTTTTCTAACTA
AAAATGAGTCGTTACAAGCTTTTTCTCGGTCATCTATCACCAGATGCAAG
AACTCGTGATGTTGAAAGATTCTTTAAAGATCATGGGTTTTCTAAATCGA
TTGTAGAAGTCGTTGTGAAAACTGGATATGGCTTTGTCGTAAGTCTTTTT
CTCTGCAAATAGATAGTTTTTTTCTTCGAAAAGGTTTGCATATTCCTAAT
CAAGTCCGACTTTTCTTGGGCATTTCACATGTTCTTCAATGGATATATTT
TTTGATGATCTAATCTTTAAATGAAAGGCTATTCCATTCTTAAACCAGGC
AAGGGCATCGGTAGACAGGACACCTGTCCTGTATTTTTATAATCTGACAT
ATACAGGACAGGTACGAGCTGTGAGGCAGATTTCTGCCTCAAAAAACTTA
CAATGGGAAATTCGAAATAGTGCTGTCCTCTTTTACTAAAATAAAAACCA
TATCATGGATCCCTAGGCTAGGGTATCGGCAACCCTTTCCAGAGGGGGGA
CTGAGCTTGGCTTTTCTAAGGGGTTTAGTCACTTATTTATTATATTCACA
GGGGATCATTGGAAGTTTGCAGGTCCTTCCAAGTGTCAACAAAGATTTAG
AGGGGCTCTTTCCTCACAAGCTGGCATAAATAGTTTCCCATAGCGGCATA
GGGTTTCACCCACAAATCTCCCACGTGCGTTTGGTTTGGGAACGCGAAAC
ACGAATGCGAACTACCCATGTCTAAACTTTTCAATATATCTCCAAAACTA
ACAGACTTTTTGAAATTCTGTAAAAAGGTCCAAGTTCCTGAATAGTTTTA
CTATGTTCTGTGAAAAAATCATAAGGCGACCGCCTGCATGCTCTTAAGCC
GCCGCTCAAAAAAGTTCATTATTTCTTAAAAACTCATTATTTTCTTCTTT
TCCTGTGCCAAGCTATCCAAAACACTCAAAGTGAATCAAAAATAACATCT
TCGCTAACAAAATGTGCGCCTCGAGTAAGAAATATGGTTCCAATCACGTC
CGCGAATGGGGTGGGGATTTTTTTAAGCAGTGGGCGGCATCAAGGGCGTT
TTAGAAATTCGCGTTTTAGACGCGTCTCGAACGCGTTTGAATTTTGCGCG
TATGTTATTTTGATTTCGAAAGTGAAAGCAGCTCGATTTCACGGTGGAAT
TCAACTTCGTTGGAGATTGGAAGCACCAGTTAGGAATAATGAATAATGAA
ATTTTGCCGCATCAAATATTTTTTGAAACGCGACGGTAAACAGAACATCA
AATTCCCATCGCCTAACCATCAGTCAAATACGCGTTCATCTATTTAAAGA
TTGAAGACAAAAATTGCGAAGAAAAATAAACCTTGAGCACAAAAAATGCT
TTTTAAACACTTTTTTCCACCGAAAAACAAATAACTTTTATAGACTTACC
TTCCCCAAACATTGAAGAAGCCTCTGCTAATCAAAGTAAATGAGATAAGA
TAAGATAAAACCTTAAAATCAACCAGAATTTACAACATTTCGTTCAAAGC
AAAAGACATGCTTTTCTCGCCGCCATCTTGTTTTAGAATGAGAATTATTT
TCGGTTCCAGTTCCCACGGTCTTTTTTTCATCCAATCAGATCGCGCGATT
TCACTTTCGCTTTCTCTAGTCCAATAAGACTGCGGGATTTGAGTCATGTG
ACATCTCTATTGAAAAACCCTCGCGGAATAAAATAGAAATACAGGGGGTC
ACACTACTGGCTACAGGAACTGAAAGCAAACAATTTTAAGGCCAATATTT
TTGGTTTTTCTGAAGGACAAAAGGTATAGGAAGCTTTACTGAAAGAGGGA
TAAGGCTGGGGCTATCTATTTAAAAGAAATGGACAAAAAAAGGCACTATT
TTGGGTGATAATTAAGATTTTACTTAGAAACTTTAATTCTCTTACCCCCG
TCTCGGGCCCCCCTGATATGAGCAGGTGAACCATGTTGGCCACCCCTACT
GAAAATTTCAGATCAAAACAAACAATGAATTAATTCCTGTAACTCGATGA
AAATTGGAAAAAGCTGGTTTTGATTGTTTCTGATCTTTTTGGTAAAAGCT
ATGCAATTTATGTTTGGATTTCTAGAAAGCCTACCCATTCATTGTCAATA
TATTTTTTATTTGAAAGTAATTTGTTGTTCAAAAGTGGATTAGCGGCAGA
TTAGATTAACTTTTCTCAACTTCAGTTGAGTTAGAATCTGAGAATGTGTG
TGTGTGTGTGTCTGTGTGTCTGTGTGTGTGTATGTCCCAAAACTTTGGGG
CAGCCTGGAGACTTCAAAAATTGTTTGATTTGGCTGAAATTTGGCACACT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGTGAATATCTGGGGGTGCTTTTTG
CATTTTTCAAAAATTTAGATTTTTGGGGCCTAGGGACGAGTTTTTTGCCA
AGACGAGGCTAAAGCTTTGAAGTAGCCTACAGCCCTCCAAAATGGTCGGA
TTTGGTTGAAATTTGGCACACTTGTTCATTGGGTAAATATCTGGGGGTCT
ACAATTGGGCCTATGAATCATTTGAAGCCACTGAAGTTGAGCCCAGTGCG
TTGCGCACGTTCGACTATTGATTATTAAATCCCGATTAGTACAGTACCAC
TGGTGTTAAAAAATTAGGCATGAATCTGGATCAATTTCCGATTAAATAAA
AAGGCAAAATTTTAATCCTGCTCTGACCCAGGATTAGCTCAGGATTTAAT
CTAATCAACTTTTGAACAACCAAGCAGAACCAAGCCAAGAGGATAATTTT
CGGTTCAAAATTTCCAGGGGTTGGTAAAAACTTTGTCAATACCCTCTGTT
TAATTTGTTTTTGGAATTAGCCCAATGAAACACAAATAAAGAATTACTAC
TAAGCGAGTTACTTTGATTTTGAGTCCATCTTGCAGTTAACAATATAAAG
TCCCTCTCCAAAAATCAAATTTCTGAAATTTTCTTTTAGATTTTTGACGA
CAGAAGAGATGCAGATGATGCAATCTATGAATTAAATGGAAAGGAGTTAC
TTGGCGGAAGGTATTATATTCAAGCAAGTTCCCCTTGGAAGCCAAAAAAG
CTCTTTTTATGCTTTTTTTTTATCATGAAAAAGGCTCATTTTACAATTAT
TCTTTAAACTTTAGAAAGGCACTGTCTGATGACCAGACCCTGAAAGTGTC
ATGAAAAGTGATTTGACAGTTTTTTCATATTTGGTACTGTTTTGGTGTAA
CTATTCATTCTCTTTCAGACTTCAAGTTGAATTCGCAAAGCCGTCTGGGA
GATTCGAAGACAGAGATGGCGGTGGTCGTGGACGTGGTGGAGGCTATGGT
GGTAGTGGTGGTGGCGGGGGTGGGGGTTACAGATCAGATAGAGATCGAGG
CGGACGCGGTGGTGGTGGCGGCGGCGGAGGTGGAGGGTGAGTTATAATTT
CATTATTGGACACACATGCCATTGTTTACAAAGATATCTTACCATTGACC
AGTTCTGGCTCTGGACAGTTTAACATTCAATGTGGTATCGCTGTCATCCA
TTTTATGATGAATTTATTCAAATACTTTCCTTTACAGCTATGGTCGTCCA
TACAACACAGAATACCGAATTATTGTTGAAAATCTATCAACTAGAGCAAG
TTGGCAGGTAAAATTTATCTGTATGATTTTTATATCAAGGATATTAATTT
TCATTGGCTTTAACTGACCACTAAAATAGAAATTGCTTTGTTCTGTTTTT
AAAAGTTTTAGCTTGAGAAATTATTAAAAAGATTTACCTTTTTTAAGAAA
TTTTAAGGTTGTTAAATTTTATACCAACTAGACATACTCCTTGCTTTCAC
TAGATTTTTGAATACTATTAATTTTAATTTTCAATCCTGGATTCCCTTTT
CTAGCATTTGTTGTTGTGCACTTAAGTGTTGTTGGCCAGTTCTAAGAATT
GGTGTAAATGAATGAATGATTTGTGTAGTGGGTGTTGCGCTTGTATGGTG
GCCAATGCCAAGTTTGTGTGCCCAAAATCTAATAAGATATGTGTTGGGTG
AAATGTGATACTTGGCTTAAGAATTTCTGATTTGGTGGCTGAAATATGTC
AATCCGGGAAGATGAAATGCTCTCTGGGTGGATTTTGGCAAAATTCAATT
AAGAATTTCTGGTGGCTATGTCTGGAATGTCCTTGTGCAATCCAGGTTTA
TACATGACATGGCTACTAAATTGGCTGGTCTTGCTCTTCTTTGCCTTGGC
TGGGTTGTTTTTGCTTTTTGTTAATTTTGAGCAGCAGAGGTACAGTAAAG
TGTCAAAGATACTTGTATTTCTCATGTTCTATAAAAAAGTTCTCATTCAA
ATAATCTTTTCAAGCAAGCCAACTCAAATCAGGTTCATTTAAGGCTTTTG
CATTATCTTTATTCTATCTATAACCGAGTGTCATAAATTTTTCACTTCAG
GATCTTAAAGATTACTTCAGACAAGCTGGTGAAGTAACTTTTGCAAAATG
CCATAGAGAAAAGATGGGAGAAGGGTAAGTGGACCGACCATAATTGGACC
TAGGACAGCCGAGGAAACCCCTAGGAAAATAAGGAATTTGGGGAGAAAAA
GTCCACTGAAGGTAATCCCATCAAGGCTATCCATTGTAAATTTTATGAAT
TTGAAACTCGCCAACCAATTTGTGGTCCAAACCTTCATTGAAGCTGATTT
TGTTTATCTATTTTCAGTGTTGTTGAATTCGCAAACAAGTCAGACATGAA
CAACGCCATGAGAAAACTTGATGATACAGAGCTTTTTGGAAAAAGAGTAA
AACTCATTTGTGTAAGTATCAATTTTCAAATTTTTTCAAAAACTATTTAA
TTGCTTGTAAAGAAAACATTCTGACAGATTCTGACGATAGTTTCACACTA
GTACTGTTTCACCTCTTACTCTAGACACTGTAACTGTAAAAACAAAAAAT
AATTCGCATTTATTTTTTTCAAACCTTAGAATTTCTCTGGTTCACGATCA
CGCAGTCGTAGTCGTTCACCTCGTCGTCGCTCGTTCTCCCGCTCACCACA
ACGCGGTCGCTCACGATCTCGAAGTCCACGAAGGAGCTTCTCGAGAAGTC
CTCAAGCTCGACGATCATTCTCTCGCTCAAGATCCAGATCACCTCGTTGA
ACTCTTTTTTAGATATTCTAAGATTCTTTGCATTGTCATTTAGTATAACA
ACACCTTTATGTTATTACTTTTAGGGCTAGATTTTTGTGAATATTTACTT
TGACCTCTCGCTACTGATTGATGATTTTATCAATTTTATATAAAAACTTT
TAGAAAAACATTGAAAATAGTGTACACTTTATATTACCTTTTCTTCCTGT
GTATCACCCAAGCTGAGGAATTCGTCATTCGTGTATTTTCCTCATTTCAC
TCAAAATAATATAATACTGGTCACATTGAAATTGATTTCTCTTCTATGGT
GTTAACTATTTTTGTCATCTACTTTTCAGATAAATCTTGTTTCCAGGGGT
ACCCAAAAAGGGTACAAAACTTTTCAGATCGAATGCTTAATTGCTTATAA
AGTGGACTTCCTATCCTTGGGTACAGATGGGTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063599TCONS_00063599Clytia hemisphaericatranscript
TCONS_00063598TCONS_00063598Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063598-proteinTCONS_00063598-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_394supercontigscaffold_394:104016..110399 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
140.14	125.89	397.65	460.59	835.14	661.75	575.78	591.85	262.25	257.91	266.09	246.63	232.24	237.42	266.05	300.03	305.94	314.62	109.75	80.42	276.56	273.37	191.54	175.94	249.91	292.02	218.36	231	148.79	164.05