TCONS_00006125 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006125
Unique NameTCONS_00006125
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1647

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006125 ID=TCONS_00006125|Name=TCONS_00006125|organism=Clytia hemisphaerica|type=transcript|length=1647bp
TTTAGATTCTAgcaaatcaaaaaacaacacCTATTTGTTgtaaaaatgac
aaataaacCATCTAATGGGCAAATAGCTGCCATTGGAATAGAATTGGTTG
TTTTTGCTGTACTCTCATACTTTGGAGTGAAATGGATCGCAAAAGTGTTG
GATCCCACCAGCAAACAAAAAGAGGCAGCTCAAAAACAGgcggAAAAGAT
AACCAAATCACTTGGTATTGAGACAGAGgaaacgGTCATCCTTCCTTTAC
AAAGAAGAGCATTGTTCCAAACATCAAATCTCCTTTCAGCTCCTAAAGGC
GTTTTATTATTCGGACCACCTGGCTGTGGAAAGACAATGATTGCACGGGC
AACCGCAAAAGAGGCTGGTTGTCATTTTATTAATTTGGATGTGTCAAGTT
TGACAGATAAATGGTATGGTGAATCGCAAAAACTCGCCAATGCTGTCTTT
TCTCTGGCATTGAAAATTCAACCTTGCATCATTTTCATCGACGAAATAGA
TTCATTTTTGCGATCACGCGAATCGAATGACCACGAAGTCACTGCAATGA
TGAAAGCTCAGTTCATGAGCCAATGGGATGGGTTACTCTCACAGACAAgt
tgtgacgtcatcataatGGGCGCCACCAACCGCCCTCACGATATAGATCG
CGCCATCTTAAGGAGATTACCCTGTCGTTTTCATATTGGTTTACCGGAGC
TTGTTCAACGGAAAGCCATACTGAAGATCATACTAGCTGAAGAAGATTTA
TCTGAGGATGTTGATTTCGATAACCTAGCTTCCCAAACCAAAGGTTATGC
AGGATCAGATCTGAAAGAGTTTTGCCGATATGCTGCCCTGCATTGCTTGC
GAAGACAGGTCATTGATATTGATTGTGCTACAATGGATGGAGTATCGCAT
AACAATATGTTTTTATCGCTGGAACAAAACGATTTCAACTCCGCTGTGGA
GAGAATGAAGAAAAATCGTATCCTGTTTGAACCGTCTCATCCGTTGGAAC
AGGCAGCCAATCACGATGTTGATTGAACAAAGGAGAGAGGGAGGGAACCA
ATCAGATCTCGCGTTGGTCCGGCAGgaaccaatcagaattcacgaTAGTT
TGGAAGAAACCAACCAGAATGCACGATGACAGTTGAAAGGAACAATGTAC
AGCTCATGTCGATTGAATGTTATACGATTTAGGGTTTATAGTTCACGTTT
TGTTTTTTATGTTGAAACGGCCTCTCATGGAAAATTGTATCAATGGTCTC
AATGGTATCTGCAAATCATATATTGTTGAGATGGAATGAACGTATTGTGA
GCTCTGGTTTATTTGAGAAGTGAAATCAAAGTTCGTTCGAGATAAAACAT
TGCTTTGTTTTGAATGTTGTAATCAAATTTGATCATTACAAAAGACCACT
ACTGAAATCGTCTTGTTACTTTAATgagataaattttcgcggggattaga
tttcgcggttgagcttatccgtgaaattttgagatttggcatggacttaa
ttttgcggatgacaTTATCAGAAGACAATATTTCATGGTTTTGTGCCTTT
TACTGCCAAATtgtgcatgttggttgttgaaaaaCGCATTATTAGCGcat
ctttgatgccagtaaacattttaaaagtagttatttggctttttttt
Run BLAST on NCBI

transcript from alignment at sc0000063:319491..329800+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006125 ID=TCONS_00006125|Name=TCONS_00006125|organism=Clytia hemisphaerica|type=transcript|length=10310bp|location=Sequence derived from alignment at sc0000063:319491..329800+ (Clytia hemisphaerica)
TTTAGATTCTAgcaaatcaaaaaacaacacCTATTTGTTgtaaaaatgac
aaataaacCATCTAATGGGCAAATAGCTGCCATTGGAATAGAATTGGTTG
TTTTTGCTGTACTCTCATACTTTGGAGTGAAATGGATCGCAAAAGTGTTG
GATCCCACCAGCAAACAAAAAGAGGCAGCTCAAAAACAGGTatttaaaag
gttttgtttttaaataagagtgatatcatttgcttactcatcaagcttgt
tcacattggattgatacAAATGTGGAGCAAAGTTGgacagaaaaaggaaa
agaaaaatattttttttgcttataatcagcataatataacaatagcataa
cactgtcctgatatgaaatatgtgtctgatatgaaacggaaacactaatg
taataaaacctttaaagcttggtactcactttttgaaaaaggtaGTGTTT
AACACTAAACGCCGGCGTATAACTTTATACGCGCGCGTCTGAAACCATAA
GATCTCTAGTGAGTACACTCAATAAACGCCGGCGTTTAATTTATACGCCC
GCGTTTAATTTATACGCCCGCGTTTAATGTTAAACGCCGGCGTttatcaa
actttgaaaaaaatatttaaacgcgcatatcaaaaaattttgatatgtgc
GTTTAAAGTTCAAAGGCACCGCAATGTAAACAAGATTAAatctttttaat
tcttttgtaatttttggtttttactttcgatttcgtttCACTTTTCCCCT
CTTTTACTATCTTTTACTATATTTCTCTTTGCTAAAGAGCTCCTAGTGAG
TACATAGATGATCTGAAAAGTTAAACGCCTGCGTTTATCATTAGACGCGT
GCGACTAAAGTGTTAAACGCCACTTTTTCAACAAGTGAGTACTAAGCTTA
AGTGTTTCCAGAAAAGAATGTATACATCTATCTTGAGTTGAAGCTCACTA
TGTTTAACCTTGTTTGGAACTAGTTTTATTGGTGCAGATTTGGTCTCTTT
ACCGCTTTATGAATACCCCTCCTGTTTTTACTATTCTCCTTACTCCGTTT
TACCCCCTTTATAACACTTTGTTCTTGCCCTTTTTAATGACATTTGGGAG
CGCTCTGTAGAGAGGGGAGGGGGTCGAACTATGACCCTACTATAGAAtga
ataaagctttttaatcaattttttttatgattttggtCCCTTAATAAATC
AATTACACATTtcctaaaaacaaatattttgtctCTTTTCCTGGGCACAT
TGTATGATCTTAATATGATAATTTTCAACTTTGTGTGCATGCATTCATAA
TTATAATAATAGACGGTNCATTTGGGAGCGCTCAGTAGAGAGGGGAGGGG
GTCGAACTATGACCCTACTATAGAATGAATAAAgctttttagtcaatttt
tttgatgattttagtCCCTTAATAAATCAATTACACATTtcctaaaaaca
aatatttttgtctcTTTTCCTGGGCACATTGTATGATCTTATATGATAAT
TTTCAACTTTGTGTGCATGCAtttataattataataataatcGGCTGTAG
AGGGACAAATAGAAGGCTTACTAAACTAAATAAGATAACTGAGAAATCCA
TTTTCCactctttattttcattttaggcggAAAAGATAACCAAATCACTT
GGTATTGAGACAGAGGTATTAGATAAATCATAGTTTAACTGGgttgattt
tcaaaagatttaaaACTCACAAAATCACTCAACATTGCTGACTCATGACA
TTAAATGACCGTGAAAATTCCATTTTTTGTCGTAAATTGCAAATCTTACC
GGGTATTTCAAGCCGAATTTCTGATCTTTTTAAGTAGATTCAATATATTA
AGAATGAGCAATTCCACGCGATTTTGTGAGTTTAAAAAATCATAATACAG
TAAAAGCGATGCTACTTTTACAAAATATCTTGAACTGGAGGCCAAGGACA
CTCAAAATTTGCATAAAAGTTAGTATTATTATGTTGAAAGGACAAAATAC
ACTgaattttgtaaacatagaCTTTTCACTGTTTTATTCATAAATATTTA
CGGTTTCTTATAATGCCAATGAGGTTCCTTCCTTGCCTGTAAAATAAATA
GAACTACAGCAATATTGCATTATTACTTAAAACAGGGAAAAAGATCTTTG
AGACCGCtttgtttttggtgtttttcaggtAAATCCtcgtaagtaagtct
gcgaccgcattcggaggcgacccgaaggctcctctttcgatagctatcta
cccaaaggtaggggagggcgctactctttctccctggatttctccactta
cccttgatccttctcttaattgctgagaatcaagcagagaggcatcaagt
ttGAGAATCTTTGGAATGATCcggctggggattgaacccacaatcttgcg
caccgtagccggatggtctaccactgcactacggtcgctattGTTCCATG
TTGATCTTGTattaaaagcaattttttttccCATAGCTAACAGAGTATGA
AACAACGATAGCTGCACTTTTGATTGACCCATTAAATTTACCAAATACGT
GGCATGACATTGGTGGTTTGGATTCTGTCATCTCTGAAATGAGGGTACAC
ACTGTTTTATCGTAATagaccttatcagagtttttgttttttctaaaaaa
gcgatgcattgtgggattgtttcgagtgtatattacaatagaaatctctt
aggaattcctcgagggaattctattgtaatacactctaaacaatcccaca
atgcatcgctttttaaaaaaaatcaaaaactccgataaggtctttaacct
tattacacgaataacgcaagtattcaacggccttgaaatttgcacaatct
caaatttttctgctttttcatgGAACAGTGGCCAGCagtggctggtttta
attaaggggggtttttcaattcgtgttaataaaatgactaataatattcg
tgtaataagatGCTACCAATATTTTTGGACCAACCAtcgatttttttatc
attttcctgGTTGTTATAGGCTCTATTAttaaatcgtttgttttattttg
cttttttagCTTTCGaccaaaattgaaacttttgtgTTATAATTGTATAT
TCCAATCCAGGAACCTCCCCATGGCTTTTAGAATCTGGCTGATTACTAGC
TATTTGTCTAAATTTGCATAATAATTGAGTAAGAATTTTGAGTATTTTGG
GAAAACCCTCAgcgttttcaaaatatggacCCCTCTCAATGTGTGTTTTA
CAAGCTATCTGTGGAattaccactgacctttatatactcTGAAAAAAAGC
TATATACCCGCAATCTTTGATCGTAATTTTTAGAAAGGTACTCTAAGGAT
AGCACTACTCGATATGGCCCAATTtgtaaatcaaagaaattttccgTTTA
AAAATTAGTGCTACAATTAGGGTACCCACGATAAAAAATATTGCTCGGCT
TGGATTGAGGACTGTGTCCTGGGTATATAAAGCTCAGTGGGAATTTTACG
GaaagttttctctttttttttcaggaaacgGTCATCCTTCCTTTACAAAG
AAGAGCATTGTTCCAAACATCAAATCTCCTTTCAGCTCCTAAAGGTTTCT
TGATTTTCATATCGAATCATTATAGCAATCGTCTTGCCAGAGTTGAATAA
ACCATCATCAGAGTAGGGCTGTCGACCATGtattagctctagtttagaca
gcccacttttcgccctgcctattataactgtgaattaaagtgggcataaa
gtgggctatctaaagtcattgcattgccctcttttgacgtcaatgcactg
acttctttcaatctttcctAAGCAAAGATTTTAGCTGCTAACTTTTTGCC
TCtactaacaattagaataggtagggaagaaagtcggccgtctaaactag
agctaagctGCTTTTTTACCGTTAACTACTGTAAGAGTTTTCCTATTTAA
GCCGGTAAGTAATGACTTAACTCTAGTTTAAACGGTCacctttctgccct
gcctattctaattgttagagtaggcagaaagagggcacaaagttggcagt
taaaatctttgcttttagaaaagattgaaaaaagtcattgcattgagaGG
GAAATgtattgactttagacagcaaACTATCTGCCGACTTTAattaacaa
ttagaataggcagggcgaaaagtgagccgtctaaactagagcttactttg
gatatttgaaaaaaaaagttgtattTATTATTGTAGAGCTTTTACCGTGC
TATCTTTCTTAAGGCGTTTTATTATTCGGACCACCTGGCTGTGGAAAGAC
AATGATTGCACGGGCAACCGCAAAAGAGGCTGGTAAGTTGACCGGAATTG
AACTCACTGAATATTaaagtagagtctctttaacttcTCTAACTCAAATG
TAGGTGTTGTAGTTGTGAATGTACTCCTAGGAGAGTAGGTGTTCCGCTCC
ACCTGAGACCCGGCTACCCGCTAAAAAAACTCTCACTCCTACCTCCGCTG
ATATCTACTTACCTACTACAATAGCAAATTGTCACTTTTCATTCCACTTC
ATCGTTTCAGGTTGTCATTTTATTAATTTGGATGTGTCAAGTTTGACAGA
TAAATGGTATGGTGAATCGCAAAAACTCGCCAATGCTGTCTTTTCTCTGG
TATGTTTCGCTACTGCGTTGTGTTATACTCTAATTATCCAACATTTTATT
TCCATCTTGTTCAAATACACGCTACatgaaattatgtttttttttcaact
accgtcaagacattttttaaattcaaaatctgACATCACAGCAAATAAAG
AATGAACTTCTTCTTGGGCTTAAATTGTTCTCAGTTATTGTGCTCTTAGT
GTAAAAGCTGGATAGCAGCAGTTGATCTTTGTATACACGCGTTTAATTGA
GCATTTTATATATAAGAATACTTTGTCAGGCAAAATATCAAGagtaaatt
aaaaataacattATTACCATTAAAAGGCTTTGGAAAGTATGTATAGAAAG
ACTTGCtcaatagtgaaaataagaaaattatgaaaacatttttaggctta
actctgaaagttaagaacatccaaaggcttgaAAGATTtaggacattctt
ataaaaaaaggtgtatctCGAGAGAACTGATCAGCACTAAATTAGAAACG
TTGAATGTCGATGGTTTTTGTCAAATTAGTATTGCAGATAACAGAAAttc
attgttttgttttacCTCGTAGGCATTGAAAATTCAACCTTGCATCATTT
TCATCGACGAAATAGGTATGGATCTTCTTGTTATTTCTATGAGTTTCCCC
CTCAATCTTCCTAGAACTTTTTCTGAATCCTTTTCactcatcattattca
tgatatgcactattgtaatgtcttccaaggacccaacagctgattggctg
aaagtggcgtattgactgattttttgtcaataacaaccaatcagctgttg
ggtccgtgatgtaatgtcagaagacattgcagtagTGCATAACATGAATT
CAACCCTATTTTGCAATTGCTATATATAAATCAACAAAGCTTATGTCTGA
ATTATCCCGAAATTTATTGCAAAAGGAACTCGTTTAAAAAGTCCTACTCA
AAGCTTATGTATAGCTTTCGAAATGTATATGATGTTATTGCCTGAaaata
agtttgaatttttgaaaatctcttaCCCCTTAGGACCTTTTCGGGGAAAg
ggaattttcccaaaaatgagATTCCACGAGTTTCCTCTTGAAAAGGTCTA
ATTAAAGCTTcggtattattttttttctactaACGCATCCGACGTTGTAA
AGTTTTATTAAAGACTTGTAAATAGACATAttgccttatccgttgggcca
caggaccagCCTTTTCAACATCTAGCTCTCTTATAACATATCTTGGTTAC
TTATCCAATACTTGTTTTATTGAATCTCTGTGATTGTATTTCTTCCTTAC
CTGCCTTTCAGATTCATTTTTGCGATCACGCGAATCGAATGACCACGAAG
TCACTGCAATGATGAAAGCTCAGTTCATGAGCCAATGGGATGGTATGTAG
TTACTCTCTCTATGAatcgttgaaaagattttttcaagaaaaacattaac
cttatatattgtccggggggtagcgaaaaatcatcaaaatttgccttgtt
cggggggtaaatttgctctgtccgggggtaatttggatTGTCCGGGgagc
caaaagtcactttgtcactgaaaattgttatatccttcaccccccatatt
aaatttttttctggaaaagcccattcggAGAATTCACGAACCGCGTTCAA
cgaaagaacaaactatataagtaTATACTGTGTAGACACCAACAATTTAA
AACATCATTTAAACGAAGACTTTGCAAAACAAAACTGATCGAAACGCTTT
ACTATTTTCGTCAAACGGAACAACTCCGTTTATTTCGTTGCTCTTAAACG
TTCCAAAACCAACACGAACACTTGTTATCCTTAACTAGAACCGATGCTAA
ACTTTAATGTCTACACATGGTCttagaaaattaagaatttataGCTCGTT
TAAATGAAcatgaaacttaaaaaaactaGGCTTAAGATTTCTCTGAGAAT
ATGAAGAATTGGGGTCTAAAAgtgatattttctttcttttataataattc
atatattattcaaaaaatttgaatatggggggtggatataacaattttca
gtgatttaccccctggacaaagtgacttttgccccccggacaagcatcag
ttgaccccccggacaacccaaattacccctggacagagcaaatttacccc
tcGGACAAGgcaagttttgaggattttttgctgcccctggacaatatatc
ctccacccccatgtacggacattttctggaagagcccattacacTTCCTT
GTAAAAGATTTAACCAAAATGACTGACACTCGATCTTTCATTTGCTACGG
GGTGTTTTTATTTCAGGGTTACTCTCACAGACAAgttgtgacgtcatcat
aatGGGCGCCACCAACCGCCCTCACGATATAGATCGCGCCATCTTAAGGA
GATTACCCTGTCGTTTTCATATTGGTTTACCGGTAAgatgaatgttttga
aaaagaattgtttccaaacaaatttaataaaagactgttaatctaacgtt
tccagaccatcgaaaaagaacgacaaataactgttaaaaagtgacaaaaa
gaACTGACAAAacctaaccctaactatcaaagaacgacatatttcgccat
ccacaaccccgaatAAAATTAACTGTACCACACCCacagattcattcctc
tttgtttatcacgggaattaactacatgtggtttaaaagaatgcaaaatt
acgcatgcgtataagtctctatttgggtgagctggaatcattagatgaac
taactcATAATATTGCATGACTcattgacctttatataccttGGATATAG
ATCTGGccaaacaaaatctttgatcgaagttttttttaaagtggtaccag
ccggcacacaacgttgtttcaacgtttatctaacgttcacaacgtccata
taacgtNcgccatccacaaccccgaatAAAATTAACTGTACCACACCCac
agattcattcctctttgtttatcacgggaattaactacatgtggtttaaa
agaatgcaaaattacgcatgcgtataagtctctatttgggtgagctggaa
tcattagatgaactaactcATAATATTGCATGACTcattgacctttatat
accttGGATATAGATCTGGccaaacaaaatctttgatcgaagtttttttt
aaagtggtaccagccggcacacaacgttgtttcaacgtttatctaacgtt
cacaacgtccatataacgttagattaacgtttaaacaacgtagtgtgcca
gctggggtaccttcatggtagcactactcaatatcggtgaacaaattttt
aaatgaaagaTGTTATCGAATTACAAATTGACTCACATCGAGAAGTGCTA
CCATTCGGGTaccatttttccaaaaattccgATCATAGATGGCGGATAGA
TATAGCTTGGTTCAGGGTATATCAAAGTCAGTGAGTTTGGCGGCTGAAGT
TTTTTCGTATCGCAAACTCTTGTTGAAAAGGCAAGCATGtggctcaaatt
ttaatttGCTGTTTGAAAGTAAATTCCTATCTTTTTTTACCCTAAATATC
CTGcaactgccaaattaaattcccgccaaatttatttttttctccgccat
ccgccaaattaaattccgtctgaaaaaactttttcggccatctgcCAAac
taaattcctgccaaaatttctttctataTTTCATTTGAACTATTATCCTT
CAATTTTTCCAGGAGCTTGTTCAACGGAAAGCCATACTGAAGATCATACT
AGCTGAAGAAGATGTAAGAAAAATTTCATTGCGCCAATATTGTCAACCTT
TTTTATTGAGGGCTCTGacctagcctagaaatctaagccagattgattca
gtcacttagtAAAATCtaatggtaagttgtgactgaatatcagtttttca
aggcaaacttaaaattccgtacatcataaaaatcatcAAAGCACCGATAA
CGCTATATTGCCTTCAGCCGTACCTTGGCcttgtaaaaactggcttggtt
aaccaggctaGCTCTGACCATAGTTATTTCTTACATTTGGCAAGTACAAA
ATTTAACATACAGctgttgactctcgctaattggAACTCCAAACTCTTat
ctgttcgaattacagagagattcgaattatagtaTATTAAGAGGGTTTTC
CTCTGGCAGTGACTGGAAatgatttcgagttatagaaattcgaataaaag
aagttcgaattagcgaaagtCCACTGTATTGcgatcttaaaattttaaat
cctcTACGCTTCGCATTTTTAAAATTAGCTGAAACGAAAATTATTTTCGT
TGTACCGTAAGTGTCGTTCATTTTTTGTCATGATTTTGTTTACAGTATTA
CAATCCCAATAACGACCCATCAACATAATAATTGTTTCATTTTCTAGTTA
TCTGAGGATGTTGATTTCGATAACCTAGCTTCCCAAACCAAAGGTTATGC
AGGATCAGATCTGAAAGAGTTTTGCCGATATGCTGCCCTGCATTGCTTGC
GAAGACAGGTCATTGATATTGATTGTGCTACAATGGATGGGtatgtgtta
aaaattcatgatatgcaccactggagagtcttccgagcttttaaaatttt
ccacccaatagaaaaagtgacgtattgggtggaacaaaaacagaaaaatt
gcataatttcgtgaagtcattgtagtggtgcatatcatgaattatttcCG
ACGTAAGTCAGAAGATGATTATGAATTCCAATTTTCCAAATTGTGCTTTC
TGATTTGGCAAATACTTCTCTGAGCGGGGCAAAAAAGTGGACAATTCAAG
ATGGTTGCCAAAAATGTGACAAAAttggaaagtttttttaaaaataacaa
gcaaatttgtaaataaatttttcacatcaaaaatGTATTTCATTTTTCTA
CAGAGTATCGCATAACAATATGTTTTTATCGCTGGAACAAAACGATTTCA
ACTCCGCTGTGGAGAGAATGAAGAAAAATCGTATCCTGTTTGAACCGTCT
CATCCGTTGGAACAGGCAGCCAATCACGATGTTGATTGAACAAAGGAGAG
AGGGAGGGAACCAATCAGATCTCGCGTTGGTCCGGCAGgaaccaatcaga
attcacgaTAGTTTGGAAGAAACCAACCAGAATGCACGATGACAGTTGAA
AGGAACAATGTACAGCTCATGTCGATTGAATGTTATACGATTTAGGGTTT
ATAGTTCACGTTTTGTTTTTTATGTTGAAACGGCCTCTCATGGAAAATTG
TATCAATGGTCTCAATGGTATCTGCAAATCATATATTGTTGAGATGGAAT
GAACGTATTGTGAGCTCTGGTTTATTTGAGAAGTGAAATCAAAGTTCGTT
CGAGATAAAACATTGCTTTGTTTTGAATGTTGTAATCAAATTTGATCATT
ACAAAAGACCACTACTGAAATCGTCTTGTTACTTTAATgagataaatttt
cgcggggattagatttcgcggttgagcttatccgtgaaattttgagattt
ggcatggacttaattttgcggatgacaTTATCAGAAGACAATATTTCATG
GTTTTGTGCCTTTTACTGCCAAATtgtgcatgttggttgttgaaaaaCGC
ATTATTAGCGcatctttgatgccagtaaacattttaaaagtagttatttg
gctttttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003498XLOC_003498Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006125-exon-sc0000063-1491911889:319491..319679TCONS_00006125-exon-sc0000063-1491911889:319491..319679Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1510915933:319491..319679TCONS_00006125-exon-sc0000063-1510915933:319491..319679Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1575043694:319491..319679TCONS_00006125-exon-sc0000063-1575043694:319491..319679Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1491911889:321117..321155TCONS_00006125-exon-sc0000063-1491911889:321117..321155Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1510915933:321117..321155TCONS_00006125-exon-sc0000063-1510915933:321117..321155Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1575043694:321117..321155TCONS_00006125-exon-sc0000063-1575043694:321117..321155Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1491911889:323015..323084TCONS_00006125-exon-sc0000063-1491911889:323015..323084Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1510915933:323015..323084TCONS_00006125-exon-sc0000063-1510915933:323015..323084Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1575043694:323015..323084TCONS_00006125-exon-sc0000063-1575043694:323015..323084Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1491911889:323754..323822TCONS_00006125-exon-sc0000063-1491911889:323754..323822Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1510915933:323754..323822TCONS_00006125-exon-sc0000063-1510915933:323754..323822Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1575043694:323754..323822TCONS_00006125-exon-sc0000063-1575043694:323754..323822Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1491911889:324051..324139TCONS_00006125-exon-sc0000063-1491911889:324051..324139Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1510915933:324051..324139TCONS_00006125-exon-sc0000063-1510915933:324051..324139Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1575043694:324051..324139TCONS_00006125-exon-sc0000063-1575043694:324051..324139Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1491911889:324713..324755TCONS_00006125-exon-sc0000063-1491911889:324713..324755Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1510915933:324713..324755TCONS_00006125-exon-sc0000063-1510915933:324713..324755Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1575043694:324713..324755TCONS_00006125-exon-sc0000063-1575043694:324713..324755Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1491911889:325452..325532TCONS_00006125-exon-sc0000063-1491911889:325452..325532Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1510915933:325452..325532TCONS_00006125-exon-sc0000063-1510915933:325452..325532Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1575043694:325452..325532TCONS_00006125-exon-sc0000063-1575043694:325452..325532Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1491911889:326457..326572TCONS_00006125-exon-sc0000063-1491911889:326457..326572Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1510915933:326457..326572TCONS_00006125-exon-sc0000063-1510915933:326457..326572Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1575043694:326457..326572TCONS_00006125-exon-sc0000063-1575043694:326457..326572Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1491911889:327853..327903TCONS_00006125-exon-sc0000063-1491911889:327853..327903Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1510915933:327853..327903TCONS_00006125-exon-sc0000063-1510915933:327853..327903Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1575043694:327853..327903TCONS_00006125-exon-sc0000063-1575043694:327853..327903Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1491911889:328538..328680TCONS_00006125-exon-sc0000063-1491911889:328538..328680Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1510915933:328538..328680TCONS_00006125-exon-sc0000063-1510915933:328538..328680Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1575043694:328538..328680TCONS_00006125-exon-sc0000063-1575043694:328538..328680Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1491911889:329044..329800TCONS_00006125-exon-sc0000063-1491911889:329044..329800Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1510915933:329044..329800TCONS_00006125-exon-sc0000063-1510915933:329044..329800Clytia hemisphaericaexon
TCONS_00006125-exon-sc0000063-1575043694:329044..329800TCONS_00006125-exon-sc0000063-1575043694:329044..329800Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000063supercontigsc0000063:319491..329800 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	1.27826e-05	2.95555e-10	1.68211	0	0.00284008	1.04997	1.82537e-08	0.941584	0.288324	0.540768	0.0158481	0	0	0	0	0	0	0	0	0	0	0	1.37425	1.61689	0.817166	0	0.000884719	0
Blast
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BLAST of TCONS_00006125 vs. Swiss-Prot (Human)
Match: ATAD1 (ATPase family AAA domain-containing protein 1 OS=Homo sapiens GN=ATAD1 PE=1 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 5.023e-109
Identity = 174/340 (51.18%), Postives = 226/340 (66.47%), Query Frame = 1 
Query:   61 SNGQIAAIGIELVVFAVLSYFGVKWIAKVLDPTSXXXXXXXXXXXXITKSLGIET-------------------------------------EETVILPLQRRALFQTSNLLSAPKGVLLFGPPGCGKTMIARATAKEAGCHFINLDVSSLTDKWYGESQKLANAVFSLALKIQPCIIFIDEIDSFLRSRESNDHEVTAMMKAQFMSQWDGLLSQTSCDVIIMGATNRPHDIDRAILRRLPCRFHIGLPELVQRKAILKIILAEEDLSEDVDFDNLASQTKGYAGSDLKEFCRYAALHCLRRQVIDIDCATMDGVSHNNMFLSLEQNDFNSAVERMKKNR 969
            S  ++  +   L +F  ++YF +KW+   +DPT KQK  AQKQAEK+ K +G++                                      ++TVILP++++ LF+ S LL  PKGVLL+GPPGCGKT+IA+ATAKEAGC FINL  S+LTDKWYGESQKLA AVFSLA+K+QP IIFIDEIDSFLR+R S+DHE TAMMKAQFMS WDGL +  SC VI+MGATNRP D+D AI+RR+P RFHI  P L QR+AILK+IL  E++   VD   +A +T G++GSDLKE CR AAL C+R  V     +T +     +    ++Q D + A+E+MKK++
Sbjct:   12 SRNEVVGLIFRLTIFGAVTYFTIKWMVDAIDPTRKQKVEAQKQAEKLMKQIGVKNVKLSEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYV----NSTSEESHDEDEIRPVQQQDLHRAIEKMKKSK 347
The following BLAST results are available for this feature:
BLAST of TCONS_00006125 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATAD15.023e-10951.18ATPase family AAA domain-containing protein 1 OS=H... [more]
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