TCONS_00059442 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059442
Unique NameTCONS_00059442
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2838

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059442 ID=TCONS_00059442|Name=TCONS_00059442|organism=Clytia hemisphaerica|type=transcript|length=2838bp
ttcagtgaaacctaaacaaaaaaaacgaaaaattgaaaattacaaCAACT
ATACAACCTACTAACCGAAGAAATGTTATACACCATACCTTCTAGGAGAA
GTACCTAGTAATGCTAAGGCGAGGCAGTATGCCCTCAGCGTTGCATAGCC
AAAGCATTCAGCCAAACTGGCCAATGAAGCAAAAATTCAGAGGGAAACGa
caACCTGCTTACTATCTTCAACCGGATTACCGAATCCATGAATTCAATAA
GCGTTTGCAGGGCCAAAGTGATaaaaatgacCAAACATGGTGGGACGAGT
TGATCAACGAATTCTTTGAGGAAGATGCATCTCTCCTCATCCAATACAAA
GAGAAAAACcacaacaaaaaattaaTGATCCACAGGCGGCTGATACCCCG
ATACTTTCGCAGTCTGTTTGAAGGAGGTGTTTCAAAGATCTATTATGTGG
TCTTGGAGTCAAAAGAGAGTTACATGAATGCCACGGTATCCGTGGACTGC
AAGCATGCTAGCATGATCACTCACTTTGATCAACCCAAAAATCTAAAGGT
TCATACGGACGGTCATTTAACGATCGAGTTTGCGTTCGATTCTTTCATGA
GGATTCGGCATTGGAAATTCATTGTGAAGGACACTACAGAGTACCTTCCC
AAATCTTCCTTCAACGAAAAAGACGAATCGAAAGCCGAAGAAATGGCAAA
GAATGTCATGGAACACGGTCAACCACCAAAGTCTCTACACTATCTACgtG
TTGGAACGGTACTCGAGTCAATGTTTGAAATGATGGCAAGAGCGAAATCT
GGCACCATGACACCCAGAGAGGCTTTGAAGAGTGTGTTATATGACAAATG
GCAAGCAACTATGCTGAAAATGGAATTCGAAACAAGACATCGAATTTGGA
ACCAAAATACTCAAAGCAGACCTAACAACAAGAAGCGCAAAAACCGAAAA
ACGCCCTCCGTTTCAAACGAGCCGAAGCCGCCTCCGAAAAAGAAATCACC
CTCGACATCCGCCTTTCCACCCATGTCAACATCAGACGTGATGTTTGTCG
ATGAGCCTGTTCTGATGGGCGGCGAGCTGGGAGACGATGACGAAAGAGTC
ATTACAAGGTTGGAGAACGCTCAATTCGACACGCCCAACGGGATGGTCCC
TGGCACTGGCCCTGGTGGCCCGACGGACGATATTGATGATGCTTTTGCAC
CGAGTGGTGGCATCGATCCGTCCTTGATGGGTGACTCACAACCGTGGAAG
AACGAGGTCAAACCCCAGTTACCTCCTCCCAACCAAATGGTCACTCAATC
CATGTCTCAGGTGATGAGTCAATCGATGGCACACATGGCAGCTGCGGTCA
GTCAGCATCAACAGAACATGAACAACGCACAATCGATGGGTCAAGCTATG
ATTCATCATCatcaacagcaacaacaacagcaacaagcGGCTAATCAGCA
ACAGCAGAATCATaatcaacaacaacagcagcaaCAAGTGAACAACGCAC
AGCAACAGAatcagcaacaacaacaacctcaACAGCAAGGACAACcgcca
caacaacaacaaaatcaaaatcccAACCAACAGAATCAGCAAGTGGCTCA
AATTAAAACTGAGGATCAAAACTCGTAGAGAAAATGTTTACCGAAAGTAA
CCTCTCTTTAGAAGAACATTAGTTTTCCGTTTAAATCGAACAATGTCTCC
CATTATTTTGACTCGAATTAACTTGTAGCTTGAGTCATTATTGATGACAT
TCTTTTCTATGACTGTGTTTAAATCGTCGTAAGTgagctcaaattttgaa
aaatattgtctaCTGGTTTTTGCCTAAAATAAGCTCAATTTTTAACTCTT
TGATGAAACTTTTGGCCCCTTCACGTCATTGTCCAACTTTGTCTTCCGCT
GTATTTTGGCGTCCTAACATACAAGTTTATTGTAGCAATATATTGATAAC
AATaatgataatatttttaaaccttttaaaattttggtttttacttttca
tttttatatgaaTGTCACGTGAGCGTCTTGGTTATTTAATGTTATGTAGT
AGTAATGCCCAATTTCTTTTATTCGTCTATCGTTTATTTTTTATCTCAAA
CAATTAATTTTAATCCGTCTTTTGTCAACGAAGTGTATTTCCTtataatg
ttttttataatatttaCTAGTATTATTTTGTCTCCAATATTACGTGTATT
GCTTTATTTTTgatttgacccttttttaaagtcaattttGTTTTCACTGG
TAGATCAGCAATGACCTAAGAGATCAACAGATACTTGCTCAGGTTTGCTA
ATACACTATTTTTTAACCTTACCGAAAATGTCTTCTTTGAAATATGTTTT
AGAAACGTTTGCATATATTTTTCTGATGGTCTCTCTCTACCTTTGTTTGT
CTTTCCTTGTTTTCGTGGAGAATTATTTATTGAACTTGCATTAATCCCAA
ACATCTCAAATATAAATTAAGCAGTTTTTCGTTAGAAGATGAACCTAGCC
TAAGTCATCTACGTTCATAATTTTCAGTGGTACCGATATCTTTTTACCGA
TATCATTTTGCAATTCCatggttttttcattttttcaaccaaATCTATCA
ATGTCATCAATGTATGTGTAAATCCTCAGGCTTATTTTTAAAGATATATA
ATGGTAATTTTTACTTGATTactttttaatctttttgtttattttttgtg
aGAAATTGTGGTAAAAGAACTATTTTcacagtttttttttctcaacatgt
attatatattttttgagtaAGTGTCATCTTTACTGCGCGCTAACAAAGGt
gcaaggaaagaaaaattgaaagtctttttcattgatga
Run BLAST on NCBI

transcript from alignment at scaffold_327:373289..381554-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059442 ID=TCONS_00059442|Name=TCONS_00059442|organism=Clytia hemisphaerica|type=transcript|length=8266bp|location=Sequence derived from alignment at scaffold_327:373289..381554- (Clytia hemisphaerica)
TTCAGTGAAACCTAAACAAAAAAAACGAAAAATTGAAAATTACAACAACT
ATACAACCTACTAACCGAAGAAATGTTATACACCATACCTTCTAGGAGAA
GTACCTAGTAATGCTAAGGCGAGGCAGTATGCCCTCAGCGTTGCATAGCC
AAAGGTGAGATAAATTTGCTACCTTTGGTAGAAATGATGATAGAATTTTG
AAGGGCCTGAGGCACATTTTAGTATTCCCAATTGAAGTACTACGCTTCTT
ACTAAAACTACCATTAAGCTCCTTGGACCAAAGGTTTTTTAACATTCGNG
GAGAACCGACATGCTGGTGATCTTGGTAACATTACAGCTGACTCAAACGG
TGTTGCTAAAGTTGATATCAAAGACAGCCAAATTCCATTGACTGGGGTAA
ACAGTATTGTTGGCAGAGCCGTTGTGGTGCACAAAGATGTTGATGATCTT
GGAGCTGGTGGTTTTGAAGACAGCAAAACAACAGGTCATGCTGGTGCTCG
ATTAGCTTGTGGTGTTGTTGGCCTTTCAAAATGACTACAACAATCTCAGC
TTTGTAGAAAATTATGTTTTTGTATTATATTATTTCAGATCACATTTGTG
CAATCGACTCTAATGCTTTAGCAGCAGGAGCTCATATATAAGTTTTATTT
TATATTTAATAATGAAGTCCTTCCAGGCAAATTTTGTATTACTTTTTTAA
CAATAAGATTCTTAGATTCAAAATAACTATTAGCTGTGGGTAGAAATGTT
GTTAATTTGTAGCTAGGGCTCAGTGATTGGTAAATATATAACTTACTTTT
TAGACTAAAACTTTATTCCTAGTCATCATCAACAGTTAAAATTGAAGGGA
CAATCTGATAACTCATGAAATTGAAAAGAATCATGAAAAATCTACCTCTT
GAGTTTAATTGTTAAAAAGGAAGATTTTTTGAATATTTTGGTTTTGACAA
AACAAGATCTCCAAAAAAACGTTGCTTTTTTTTATTAGTTTTTGGAAATT
TGGTACTGAAATTAATTAGTTAAATTGTTGATCATACTGGCAAATAAGAC
ATTGCACTTGACTTTGTAATATTGATCTTCCATTATATTCATCACATTGA
TTTTTTTATTTTCAGTGAAACCTAAACAAAAAAAACGAAAAATTGAAAAT
TACAACAACTATACAACCTACTAACCGAAGAAATGTTATACACCATACCT
TCTAGGAGAAGTACCTAGTAATGCTAAGGCGAGGCAGTATGCCCTCAGCG
TTGCATAGCCAAAGGTGAGATAAATTTGCTACCTTTGGTAGAAATGATGA
TAGAATTTTAAGGGCCTGAGGCACATTTTAGTATTCCCAATTGAAGTACT
ACGCTTCTTACTAAAACTACCATTAAGCTCCTTGGACCAAAGGCATATGG
TTTTTTTAACATTCATATGTTTCCTTTATTTACTTTTTTGTCTTTAAATT
GAATTATGTGTATAGATGGAATGTGATAAAAAGGTCCCCTTATTTTCTTT
GAGCCATTTTTCCTATTTTTCAGATGTTTTCAAAAAATAATAAGGGGCTT
TCTTTCAAAATAATAGCTCTTTTATAGAGGTTTCTTTTTCTATTTACTTG
GTTTAACAATAACTAATGAAACAGCAGACCTTAAGCTTATGCATAATTAA
TTGTTCAAATGTGCTACTGTTTTTTCTTTTGATTTTTTTTTTGAAAATTT
CTATAGTCGTCTCTCTCTTTTTCTATCTCATCATCAATACTAGTAAGAAA
GTAGAATGGTGTACTAGTAGTCACAGGAGAGACAGTTTATATGTTTTTGA
TAATAAAGAAGAATCTTTGATTTTATTTTAAAAAGTAAAATTTGCAACGA
TTATTTTGAGGATCCTGCTTGGGTAAATTGGGTAATAACTGTTTACTGTC
TTGGCTTCATTATTTTGAATTATTTTTGGCTGTATATTTTGGACTAGAAA
CTTTTATCAAATAAGGATTGTTATGAACGTTTGTTATCCTATTATAAAGT
TTCATAGAAAAGGTTTTTAGCAATAAATCAAAACAGAAGCTTGAGTTTCC
TTTCAATCTTAAAAAACACCAGACTGTGATATTTCATTGTGCTGCTGTTT
GGTATCTTAAAATTGTGAAATCTCTAGACAAACAAAGAGTTTTCATAGGT
AGATTTAATCTTTTTTTTCTCCATGTTTTCCACCCTAATACTAATACTTT
TTTTCTGTTTTTATATATCAAGCATTCAGCCAAACTGGCCAATGAAGCAA
AAATTCAGAGGGAAACGGTTAGTTGTCAAAAGCACTCTCGTATTATATCT
ACGTAAATCTTAATAACTTCTAATAGAAATGGCTCTTATCATACTTTTTT
TGCAGCTATTCATTAGAAATCAACAGAGTAACTTTAGGAAATAAATGAAT
CCTTTCGATTCCACCTGATACATTTATTCCTTTAGATAGTCACAGGACTT
GCTATAACTGTTACTTCGATAATTTTTTTCTTCATATTTTAGCATTTAGT
CTGTTTTTTATTATATATAATTTACTTTTTTAGACAACCTGCTTACTATC
TTCAACCGGATTACCGAATCCATGAATTCAATAAGCGTTTGCAGGGCCAA
AGTGATGTAAGTTCTTGAGAGCCAAACTAACTCTTTAAAATTGACACATT
TCCAAGACTTTTTGATTAAAAAAACAACTTGGGCATGTGTTGCAACTGAT
TACTATTGAATTACAATGACTCCACTCAATCCTACTAACTTTTCTTGGTG
AAAATAAAAATTATTTCAAACTTCAACATTCCATCCAGCCATAGTATGTT
GGATGGATTGTTGTAATTTTCTATTCCAGCCTTAAAGATATTCTTTTTCA
CGGTATTGAAATTTGTGCGCCACTTATGCTGACAAGATAAAATAAACAAA
CTAATTTCTCAAAATTTGTGTTCTCTCGTCGCGGGAGGGAGAAAGTTCTT
CATTCTTTTGTTTGAACTTTGTAAGCAAGTAGTAGGAGATAAATGATGTA
TTATCGTATTCTCTTAACAGAAAAATGACCAAACATGGTGGGACGAGTTG
ATCAACGAATTCTTTGAGGAAGATGCATCTCTCCTCATCCAATACAAAGA
GAAAAACCACAACAAAAAATTAAGTGAGTCTTCTTAAGTTTAAATTGATT
TGAGATTACTTTTTTAAATCAAGTATAGCTTACCAACTCCTCGTTTCCCA
TGAGATCTAATGTTTTTTGATAAATCAGTATTTCAAAGGAACTACATAGG
GATTAACATAGTTTAGCAATATATTATTATTTATTACAGTGATCCACAGG
CGGCTGATACCCCGATACTTTCGCAGTCTGTTTGAAGGAGGTGTTTCAAA
GATCTATTATGTGGTCTTGGAGTCAAAAGAGAGTTACATGAATGCCACGG
TATCCGTGGACTGCAAGCATGCTAGCATGATCACTCACTTTGATCAACCC
AAAAATCTAAAGGTATGATTTATTTCGATGTACTTTAACTTTAGCTATGC
TAGAACCATATAAGAAATGTCTATGTGGTTATCTAATTATGCTTTTTGTT
TCCAGCTGAACTTTCAGGAAGAAAGGATTTTTAATCCCCTCTTACATTTA
TTGGGCTTTTCCGGGAAGTAGCATCGTCAATCAAACCTCTCACAAAGTTT
TCACAATCACCACCGAAAAACTAGATGATATAATTTCATATTTTACTTTC
AAGCATTTAGCGAAGTATAATTTTGTGAACTCAATAGCTTTGGGTCGTCA
ACATACTGGGAATTTATGCCTGTCCAACCACTATCCTTTTGTTGGGTATA
TTAGGCTGAAAACAGTATAGACTAGGTCTGTTGGTTCTTTATTGTCGTGA
AAATAAAGGACTTCGAGATAATGTAATCCATCGAAGCTGAAATCCTGGAA
AGTAATCAAGTACATTACTTCGAGAAATTTCAAAGTAAGAAGTTTCCTAC
TGAAATGAAAGACTTGAACCTATGTTGGGTTACTTTACCTGCTCAGAATA
AATTATTTTCTATCTCTTATGTTTTTGTAGGTTCATACGGACGGTCATTT
AACGATCGAGTTTGCGTTCGATTCTTTCATGAGGATTCGGCATTGGAAAT
TCATTGTGAAGGACACTACAGAGTACCTTCCCAAATCTTCCTTCAACGAA
AAAGACGAATCGAAAGCCGAAGAAATGGCAAAGAATGTCATGGAACACGG
TCAACCACCAAAGTCTCTACACTATCTACGTGTAAGTTTTTTTTTTTTTT
TTTTTTTTCTACACCTCAAGTCATAAAATTCCCGTTTTTCTTTGAAATTA
ATTTTATTTTTACATAAGTGTTCTCGTTTCATACCAGACACATTTTATTT
CATATCAGAACGGTGTCTCTCTATTGTTATACATGTTGTTCTTTTTATAA
GCAAGTGTATGCCCCTTGGTCAGGCTCGTGTATGCTTAAGTTTTCAAAGC
ATTCAGGCATAGATTATGCTTATTATATGCTTATGAATCATGATTATGAT
TCACCTCGAGCCAAGTTTTTAGTGAAATTTCAGAAATTTTGTAAAAATTT
GTTCAGATTTTGGGAGCAGTGGAATGTAGGAAACCGTGGAAAGTCTTTTT
TACATTTGACCTCTACCAAACATTTTTAAACCGATAAAAATGACAACTTG
AAAAATATTTCAGGCTGACATATATGCTTATGTTATGTTTAGGAATTCTG
CAAATCTGAGCCTTCATATGCTTATAAGCGTTATGCTTATAAAAAAATAA
CATGTATTTTGCTGAATAAACAAAAAATTGTTTTTCTTTCCTCTTTCTGA
CCAATTTTGCTCCACATCCGTGTTAATTCAATGCGAAAAAGCTTGTAGAT
CAAAATTGATGAGTAAACAAACGATGTCACTCTTATTCAGAAACAAAAAT
TTTTAATATCTTTTTTTCAACACATCAGATAATAAACCTGTTCGTTTTAG
CGAATTCAAAATATTACATTTACAGTATTGTCAATAATCGTTGTTGTAAA
TGGTCTTAATTTGATTCCTCCTCGTTAGGTTGGAACGGTACTCGAGTCAA
TGTTTGAAATGATGGCAAGAGCGAAATCTGGCACCATGACACCCAGAGGT
AGCATTCAAAATTTTGAATCCTTGCAAAATTTCGAGTGTCTTCAGTTTTA
TCACAAACTTTCTTTCAATGTTTCCTTGTAATCCTACATTACTGGATCTT
TAATCTTTTTAATAAACCTTTAAAAGGTACTGGAGTAATGACAAGTTCCT
TTTAAATTTATTAATATATTTGTGTTTTTTGCAGAGGCTTTGAAGAGTGT
GTTATATGACAAATGGCAAGCAACTATGCTGAAAATGGGTAAGTACCTTT
TGCTTTAGACTTTATTCATACGCGAGTATAAACATTAGAAAAACGAAAGC
CTACCAGATCCGAATTTTGTACGCAGACTTTGATTTTAAGTTATCCTATT
TTTCTTCCATTTTGATACAAGAAACCCGTAATAAAATTACACCAAGGAAT
TTTTCAAACTTTCTAATTGTTATATATTGAATTACTTTCTCCTTTTAAGA
ATTCGAAACAAGACATCGAATTTGGAACCAAAATACTCGTGAGTAGTTTC
TCTTCTCTTTCCATTCTTCTCAAAACGAAGCAATGGTCAGAAAGATGCCT
GATTAGTTTCTGGAAGTTAACTTTCGGTATATTATGGAATCGAAATACGA
ACATTTAATACATGATAACCCTATGGTAGGGTGTGTGATGAATTTTCTTT
TGAAATACGTTATCCGAATAAATTAGATAAAAATATTTTTAAAAATTCCG
TTTGCCCCACCTGTTTGTAAAATCAATTTTTATAGAAAGCCTTCCAAAGT
GATAAATATGACAGTAAGCCATGGTTATTGCTATTGGCGGCTCTGAAATA
GAAAATTTAGGCTTGGTATAGTATCTTTCCAACTTTCATCCTCTTTCAAA
CACTTATTTGTCTTCTCTTTTAGAAAGCAGACCTAACAACAAGAAGCGCA
AAAACCGAAAAACGCCCTCCGTTTCAAACGAGCCGAAGCCGCCTCCGAAA
AAGAAATCACCCTCGACATCCGCCTTTCCACCCATGTCAACATCAGACGT
GATGTTTGTCGATGAGCCTGTTCTGATGGGCGGCGAGCTGGGAGACGATG
ACGAAAGAGTCATTACAAGGTAGGGACTTCCTCCTGACTTAGTCCTTTAC
ATTTGATGTTTTGAATACGAAGCCAGGTCCCTTTTAATTAGTCTTGCAAA
ATTTTAGCTAGGGAAGATTGGGGGCCCCGGAGTAAAAAGAACTTTTCAGA
CCTAACAAAAAGTCCCATTTACACTTCTTTTTTCCATACTGCTGTAGATC
TATCGTATCAAATCCGAGCAGCAGGCTACTACTATCCACCACTTCTTCAA
CAAATATTCAAATGCTACAGCAGTTCACAAAACAAACTACTCAACAATTA
ACACAAATGCACAGTTAGGAAGCCTTCACACTTCACAACTCCGCCTCACA
CCCCTTCATCAATATGGTTTTGTTTTGTTTTGCTAGGTTGGAGAACGCTC
AATTCGACACGCCCAACGGGATGGTCCCTGGCACTGGCCCTGGTGGCCCG
ACGGACGATATTGATGATGCTTTTGCACCGAGTGGTGGCATCGATCCGTC
CTTGATGGGTGACTCACAACCGTGGAAGAACGAGGTCAAACCCCAGTTAC
CTCCTCCCAACCAAATGGTCACTCAATCCATGTCTCAGGTGATGAGTCAA
TCGATGGCACACATGGCAGCTGCGGTCAGTCAGCATCAACAGAACATGAA
CAACGCACAATCGATGGGTCAAGCTATGATTCATCATCATCAACAGCAAC
AACAACAGCAACAAGCGGCTAATCAGCAACAGCAGAATCATAATCAACAA
CAACAGCAGCAACAAGTGAACAACGCACAGCAACAGAATCAGCAACAACA
ACAACCTCAACAGCAAGGACAACCGCCACAACAACAACAAAATCAAAATC
CCAACCAACAGAATCAGCAAGTGGCTCAAATTAAAACTGAGGATCAAAAC
TCGTAGAGAAAATGTTTACCGAAAGTAACCTCTCTTTAGAAGAACATTAG
TTTTCCGTTTAAATCGAACAATGTCTCCCATTATTTTGACTCGAATTAAC
TTGTAGCTTGAGTCATTATTGATGACATTCTTTTCTATGACTGTGTTTAA
ATCGTCGTAAGTGAGCTCAAATTTTGAAAAATATTGTCTACTGGTTTTTG
CCTAAAATAAGCTCAATTTTTAACTCTTTGATGAAACTTTTGGCCCCTTC
ACGTCATTGTCCAACTTTGTCTTCCGCTGTATTTTGGCGTCCTAACATAC
AAGTTTATTGTAGCAATATATTGATAACAATAATGATAATATTTTTAAAC
CTTTTAAAATTTTGGTTTTTACTTTTCATTTTTATATGAATGTCACGTGA
GCGTCTTGGTTATTTAATGTTATGTAGTAGTAATGCCCAATTTCTTTTAT
TCGTCTATCGTTTATTTTTTATCTCAAACAATTAATTTTAATCCGTCTTT
TGTCAACGAAGTGTATTTCCTTATAATGTTTTTTATAATATTTACTAGTA
TTATTTTGTCTCCAATATTACGTGTATTGCTTTATTTTTGATTTGACCCT
TTTTTAAAGTCAATTTTGTTTTCACTGGTAGATCAGCAATGACCTAAGAG
ATCAACAGATACTTGCTCAGGTTTGCTAATACACTATTTTTTAACCTTAC
CGAAAATGTCTTCTTTGAAATATGTTTTAGAAACGTTTGCATATATTTTT
CTGATGGTCTCTCTCTACCTTTGTTTGTCTTTCCTTGTTTTCGTGGAGAA
TTATTTATTGAACTTGCATTAATCCCAAACATCTCAAATATAAATTAAGC
AGTTTTTCGTTAGAAGATGAACCTAGCCTAAGTCATCTACGTTCATAATT
TTCAGTGGTACCGATATCTTTTTACCGATATCATTTTGCAATTCCATGGT
TTTTTCATTTTTTCAACCAAATCTATCAATGTCATCAATGTATGTGTAAA
TCCTCAGGCTTATTTTTAAAGATATATAATGGTAATTTTTACTTGATTAC
TTTTTAATCTTTTTGTTTATTTTTTGTGAGAAATTGTGGTAAAAGAACTA
TTTTCACAGTTTTTTTTTCTCAACATGTATTATATATTTTTTGAGTAAGT
GTCATCTTTACTGCGCGCTAACAAAGGTGCAAGGAAAGAAAAATTGAAAG
TCTTTTTCATTGATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037414XLOC_037414Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059442-exon-scaffold_327-1575043694:381401..381554TCONS_00059442-exon-scaffold_327-1575043694:381401..381554Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1575043694:379288..379332TCONS_00059442-exon-scaffold_327-1575043694:379288..379332Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1575043694:378949..379021TCONS_00059442-exon-scaffold_327-1575043694:378949..379021Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1575043694:378432..378534TCONS_00059442-exon-scaffold_327-1575043694:378432..378534Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1575043694:378093..378265TCONS_00059442-exon-scaffold_327-1575043694:378093..378265Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1575043694:377324..377524TCONS_00059442-exon-scaffold_327-1575043694:377324..377524Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1575043694:376457..376526TCONS_00059442-exon-scaffold_327-1575043694:376457..376526Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1575043694:376217..376270TCONS_00059442-exon-scaffold_327-1575043694:376217..376270Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1575043694:375967..376005TCONS_00059442-exon-scaffold_327-1575043694:375967..376005Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1575043694:375386..375581TCONS_00059442-exon-scaffold_327-1575043694:375386..375581Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1575043694:373289..375018TCONS_00059442-exon-scaffold_327-1575043694:373289..375018Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1510915933:381401..381554TCONS_00059442-exon-scaffold_327-1510915933:381401..381554Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1510915933:379288..379332TCONS_00059442-exon-scaffold_327-1510915933:379288..379332Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1510915933:378949..379021TCONS_00059442-exon-scaffold_327-1510915933:378949..379021Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1510915933:378432..378534TCONS_00059442-exon-scaffold_327-1510915933:378432..378534Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1510915933:378093..378265TCONS_00059442-exon-scaffold_327-1510915933:378093..378265Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1510915933:377324..377524TCONS_00059442-exon-scaffold_327-1510915933:377324..377524Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1510915933:376457..376526TCONS_00059442-exon-scaffold_327-1510915933:376457..376526Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1510915933:376217..376270TCONS_00059442-exon-scaffold_327-1510915933:376217..376270Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1510915933:375967..376005TCONS_00059442-exon-scaffold_327-1510915933:375967..376005Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1510915933:375386..375581TCONS_00059442-exon-scaffold_327-1510915933:375386..375581Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1510915933:373289..375018TCONS_00059442-exon-scaffold_327-1510915933:373289..375018Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1491911889:381401..381554TCONS_00059442-exon-scaffold_327-1491911889:381401..381554Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1491911889:379288..379332TCONS_00059442-exon-scaffold_327-1491911889:379288..379332Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1491911889:378949..379021TCONS_00059442-exon-scaffold_327-1491911889:378949..379021Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1491911889:378432..378534TCONS_00059442-exon-scaffold_327-1491911889:378432..378534Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1491911889:378093..378265TCONS_00059442-exon-scaffold_327-1491911889:378093..378265Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1491911889:377324..377524TCONS_00059442-exon-scaffold_327-1491911889:377324..377524Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1491911889:376457..376526TCONS_00059442-exon-scaffold_327-1491911889:376457..376526Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1491911889:376217..376270TCONS_00059442-exon-scaffold_327-1491911889:376217..376270Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1491911889:375967..376005TCONS_00059442-exon-scaffold_327-1491911889:375967..376005Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1491911889:375386..375581TCONS_00059442-exon-scaffold_327-1491911889:375386..375581Clytia hemisphaericaexon
TCONS_00059442-exon-scaffold_327-1491911889:373289..375018TCONS_00059442-exon-scaffold_327-1491911889:373289..375018Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_327supercontigscaffold_327:373289..381554 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.9708	32.1252	24.3431	4.73433	6.05455	16.6142	7.00718	2.57037	51.7279	64.4229	40.4747	40.7277	11.4474	10.8338	6.73375	6.15017	52.2235	29.6655	15.8006	31.9679	43.533	38.5254	42.3993	42.8544	2.17981	1.85098	14.1021	17.6802	22.9405	38.2774
Blast
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BLAST of TCONS_00059442 vs. Swiss-Prot (Human)
Match: LDB2 (LIM domain-binding protein 2 OS=Homo sapiens GN=LDB2 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.471e-71
Identity = 127/316 (40.19%), Postives = 193/316 (61.08%), Query Frame = 3 
Query:  195 KRQPAYYLQPDYRIHEFNKRLQGQSDKNDQTWWDELINEFFEEDASLLIQYKEKNHNKKLMIHRRLIPRYFRSLFEGGVSKIYYVVLESKESYMNATVSVDCKHASMITHFDQPKNLKVHTDGHLTIEFAFDSFMRIRHWKFIVKDTTEYLPKS--SFNEKDESKAEEMAKNVMEHGQPPKSLHYLRVGTVLESMFEMMARAKSGTMTPREALKSVLYDKWQATMLKMEFETRHRIWNQNTQSXXXXXXXXXXXTXXXXXXXXXXXXXXXXXXXXXXXMSTS--DVMFVDEPVLMGGELGDDDERVITRLENAQFD 1130
            +R   Y +QP+YRI+E NKRLQ +++ +D  WWD    EFFE+DA+L + +  ++  K+  I R LIPRYF ++FEGGV+ +YY++  SKESY N++++VDC   +M+T   +P   KV T+G L +EF FD  MRI+ W F ++   E +P+S  + + +D    ++++KN+   G    +L+YLR+  +LE M E+M+R K+  ++PR+ LK+ L+ KWQ  +      TR     Q T  R   K   +  + S +         K  +T+A   +S+   DVM V EP LMGGE GD+DER+ITRLEN Q+D
Sbjct:   19 RRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCTMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMHAQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPAEPTR-----QPTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTTAANLSLSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQYD 329
The following BLAST results are available for this feature:
BLAST of TCONS_00059442 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LDB21.471e-7140.19LIM domain-binding protein 2 OS=Homo sapiens GN=LD... [more]
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