XLOC_037414 (gene) - C. hemisphaerica

Overview
NameXLOC_037414
Unique NameXLOC_037414
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_327:373289..381555-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037414 ID=XLOC_037414|Name=XLOC_037414|organism=Clytia hemisphaerica|type=gene|length=8267bp|location=Sequence derived from alignment at scaffold_327:373289..381555- (Clytia hemisphaerica)
TTTCAGTGAAACCTAAACAAAAAAAACGAAAAATTGAAAATTACAACAAC TATACAACCTACTAACCGAAGAAATGTTATACACCATACCTTCTAGGAGA AGTACCTAGTAATGCTAAGGCGAGGCAGTATGCCCTCAGCGTTGCATAGC CAAAGGTGAGATAAATTTGCTACCTTTGGTAGAAATGATGATAGAATTTT GAAGGGCCTGAGGCACATTTTAGTATTCCCAATTGAAGTACTACGCTTCT TACTAAAACTACCATTAAGCTCCTTGGACCAAAGGTTTTTTAACATTCGN GGAGAACCGACATGCTGGTGATCTTGGTAACATTACAGCTGACTCAAACG GTGTTGCTAAAGTTGATATCAAAGACAGCCAAATTCCATTGACTGGGGTA AACAGTATTGTTGGCAGAGCCGTTGTGGTGCACAAAGATGTTGATGATCT TGGAGCTGGTGGTTTTGAAGACAGCAAAACAACAGGTCATGCTGGTGCTC GATTAGCTTGTGGTGTTGTTGGCCTTTCAAAATGACTACAACAATCTCAG CTTTGTAGAAAATTATGTTTTTGTATTATATTATTTCAGATCACATTTGT GCAATCGACTCTAATGCTTTAGCAGCAGGAGCTCATATATAAGTTTTATT TTATATTTAATAATGAAGTCCTTCCAGGCAAATTTTGTATTACTTTTTTA ACAATAAGATTCTTAGATTCAAAATAACTATTAGCTGTGGGTAGAAATGT TGTTAATTTGTAGCTAGGGCTCAGTGATTGGTAAATATATAACTTACTTT TTAGACTAAAACTTTATTCCTAGTCATCATCAACAGTTAAAATTGAAGGG ACAATCTGATAACTCATGAAATTGAAAAGAATCATGAAAAATCTACCTCT TGAGTTTAATTGTTAAAAAGGAAGATTTTTTGAATATTTTGGTTTTGACA AAACAAGATCTCCAAAAAAACGTTGCTTTTTTTTATTAGTTTTTGGAAAT TTGGTACTGAAATTAATTAGTTAAATTGTTGATCATACTGGCAAATAAGA CATTGCACTTGACTTTGTAATATTGATCTTCCATTATATTCATCACATTG ATTTTTTTATTTTCAGTGAAACCTAAACAAAAAAAACGAAAAATTGAAAA TTACAACAACTATACAACCTACTAACCGAAGAAATGTTATACACCATACC TTCTAGGAGAAGTACCTAGTAATGCTAAGGCGAGGCAGTATGCCCTCAGC GTTGCATAGCCAAAGGTGAGATAAATTTGCTACCTTTGGTAGAAATGATG ATAGAATTTTAAGGGCCTGAGGCACATTTTAGTATTCCCAATTGAAGTAC TACGCTTCTTACTAAAACTACCATTAAGCTCCTTGGACCAAAGGCATATG GTTTTTTTAACATTCATATGTTTCCTTTATTTACTTTTTTGTCTTTAAAT TGAATTATGTGTATAGATGGAATGTGATAAAAAGGTCCCCTTATTTTCTT TGAGCCATTTTTCCTATTTTTCAGATGTTTTCAAAAAATAATAAGGGGCT TTCTTTCAAAATAATAGCTCTTTTATAGAGGTTTCTTTTTCTATTTACTT GGTTTAACAATAACTAATGAAACAGCAGACCTTAAGCTTATGCATAATTA ATTGTTCAAATGTGCTACTGTTTTTTCTTTTGATTTTTTTTTTGAAAATT TCTATAGTCGTCTCTCTCTTTTTCTATCTCATCATCAATACTAGTAAGAA AGTAGAATGGTGTACTAGTAGTCACAGGAGAGACAGTTTATATGTTTTTG ATAATAAAGAAGAATCTTTGATTTTATTTTAAAAAGTAAAATTTGCAACG ATTATTTTGAGGATCCTGCTTGGGTAAATTGGGTAATAACTGTTTACTGT CTTGGCTTCATTATTTTGAATTATTTTTGGCTGTATATTTTGGACTAGAA ACTTTTATCAAATAAGGATTGTTATGAACGTTTGTTATCCTATTATAAAG TTTCATAGAAAAGGTTTTTAGCAATAAATCAAAACAGAAGCTTGAGTTTC CTTTCAATCTTAAAAAACACCAGACTGTGATATTTCATTGTGCTGCTGTT TGGTATCTTAAAATTGTGAAATCTCTAGACAAACAAAGAGTTTTCATAGG TAGATTTAATCTTTTTTTTCTCCATGTTTTCCACCCTAATACTAATACTT TTTTTCTGTTTTTATATATCAAGCATTCAGCCAAACTGGCCAATGAAGCA AAAATTCAGAGGGAAACGGTTAGTTGTCAAAAGCACTCTCGTATTATATC TACGTAAATCTTAATAACTTCTAATAGAAATGGCTCTTATCATACTTTTT TTGCAGCTATTCATTAGAAATCAACAGAGTAACTTTAGGAAATAAATGAA TCCTTTCGATTCCACCTGATACATTTATTCCTTTAGATAGTCACAGGACT TGCTATAACTGTTACTTCGATAATTTTTTTCTTCATATTTTAGCATTTAG TCTGTTTTTTATTATATATAATTTACTTTTTTAGACAACCTGCTTACTAT CTTCAACCGGATTACCGAATCCATGAATTCAATAAGCGTTTGCAGGGCCA AAGTGATGTAAGTTCTTGAGAGCCAAACTAACTCTTTAAAATTGACACAT TTCCAAGACTTTTTGATTAAAAAAACAACTTGGGCATGTGTTGCAACTGA TTACTATTGAATTACAATGACTCCACTCAATCCTACTAACTTTTCTTGGT GAAAATAAAAATTATTTCAAACTTCAACATTCCATCCAGCCATAGTATGT TGGATGGATTGTTGTAATTTTCTATTCCAGCCTTAAAGATATTCTTTTTC ACGGTATTGAAATTTGTGCGCCACTTATGCTGACAAGATAAAATAAACAA ACTAATTTCTCAAAATTTGTGTTCTCTCGTCGCGGGAGGGAGAAAGTTCT TCATTCTTTTGTTTGAACTTTGTAAGCAAGTAGTAGGAGATAAATGATGT ATTATCGTATTCTCTTAACAGAAAAATGACCAAACATGGTGGGACGAGTT GATCAACGAATTCTTTGAGGAAGATGCATCTCTCCTCATCCAATACAAAG AGAAAAACCACAACAAAAAATTAAGTGAGTCTTCTTAAGTTTAAATTGAT TTGAGATTACTTTTTTAAATCAAGTATAGCTTACCAACTCCTCGTTTCCC ATGAGATCTAATGTTTTTTGATAAATCAGTATTTCAAAGGAACTACATAG GGATTAACATAGTTTAGCAATATATTATTATTTATTACAGTGATCCACAG GCGGCTGATACCCCGATACTTTCGCAGTCTGTTTGAAGGAGGTGTTTCAA AGATCTATTATGTGGTCTTGGAGTCAAAAGAGAGTTACATGAATGCCACG GTATCCGTGGACTGCAAGCATGCTAGCATGATCACTCACTTTGATCAACC CAAAAATCTAAAGGTATGATTTATTTCGATGTACTTTAACTTTAGCTATG CTAGAACCATATAAGAAATGTCTATGTGGTTATCTAATTATGCTTTTTGT TTCCAGCTGAACTTTCAGGAAGAAAGGATTTTTAATCCCCTCTTACATTT ATTGGGCTTTTCCGGGAAGTAGCATCGTCAATCAAACCTCTCACAAAGTT TTCACAATCACCACCGAAAAACTAGATGATATAATTTCATATTTTACTTT CAAGCATTTAGCGAAGTATAATTTTGTGAACTCAATAGCTTTGGGTCGTC AACATACTGGGAATTTATGCCTGTCCAACCACTATCCTTTTGTTGGGTAT ATTAGGCTGAAAACAGTATAGACTAGGTCTGTTGGTTCTTTATTGTCGTG AAAATAAAGGACTTCGAGATAATGTAATCCATCGAAGCTGAAATCCTGGA AAGTAATCAAGTACATTACTTCGAGAAATTTCAAAGTAAGAAGTTTCCTA CTGAAATGAAAGACTTGAACCTATGTTGGGTTACTTTACCTGCTCAGAAT AAATTATTTTCTATCTCTTATGTTTTTGTAGGTTCATACGGACGGTCATT TAACGATCGAGTTTGCGTTCGATTCTTTCATGAGGATTCGGCATTGGAAA TTCATTGTGAAGGACACTACAGAGTACCTTCCCAAATCTTCCTTCAACGA AAAAGACGAATCGAAAGCCGAAGAAATGGCAAAGAATGTCATGGAACACG GTCAACCACCAAAGTCTCTACACTATCTACGTGTAAGTTTTTTTTTTTTT TTTTTTTTTCTACACCTCAAGTCATAAAATTCCCGTTTTTCTTTGAAATT AATTTTATTTTTACATAAGTGTTCTCGTTTCATACCAGACACATTTTATT TCATATCAGAACGGTGTCTCTCTATTGTTATACATGTTGTTCTTTTTATA AGCAAGTGTATGCCCCTTGGTCAGGCTCGTGTATGCTTAAGTTTTCAAAG CATTCAGGCATAGATTATGCTTATTATATGCTTATGAATCATGATTATGA TTCACCTCGAGCCAAGTTTTTAGTGAAATTTCAGAAATTTTGTAAAAATT TGTTCAGATTTTGGGAGCAGTGGAATGTAGGAAACCGTGGAAAGTCTTTT TTACATTTGACCTCTACCAAACATTTTTAAACCGATAAAAATGACAACTT GAAAAATATTTCAGGCTGACATATATGCTTATGTTATGTTTAGGAATTCT GCAAATCTGAGCCTTCATATGCTTATAAGCGTTATGCTTATAAAAAAATA ACATGTATTTTGCTGAATAAACAAAAAATTGTTTTTCTTTCCTCTTTCTG ACCAATTTTGCTCCACATCCGTGTTAATTCAATGCGAAAAAGCTTGTAGA TCAAAATTGATGAGTAAACAAACGATGTCACTCTTATTCAGAAACAAAAA TTTTTAATATCTTTTTTTCAACACATCAGATAATAAACCTGTTCGTTTTA GCGAATTCAAAATATTACATTTACAGTATTGTCAATAATCGTTGTTGTAA ATGGTCTTAATTTGATTCCTCCTCGTTAGGTTGGAACGGTACTCGAGTCA ATGTTTGAAATGATGGCAAGAGCGAAATCTGGCACCATGACACCCAGAGG TAGCATTCAAAATTTTGAATCCTTGCAAAATTTCGAGTGTCTTCAGTTTT ATCACAAACTTTCTTTCAATGTTTCCTTGTAATCCTACATTACTGGATCT TTAATCTTTTTAATAAACCTTTAAAAGGTACTGGAGTAATGACAAGTTCC TTTTAAATTTATTAATATATTTGTGTTTTTTGCAGAGGCTTTGAAGAGTG TGTTATATGACAAATGGCAAGCAACTATGCTGAAAATGGGTAAGTACCTT TTGCTTTAGACTTTATTCATACGCGAGTATAAACATTAGAAAAACGAAAG CCTACCAGATCCGAATTTTGTACGCAGACTTTGATTTTAAGTTATCCTAT TTTTCTTCCATTTTGATACAAGAAACCCGTAATAAAATTACACCAAGGAA TTTTTCAAACTTTCTAATTGTTATATATTGAATTACTTTCTCCTTTTAAG AATTCGAAACAAGACATCGAATTTGGAACCAAAATACTCGTGAGTAGTTT CTCTTCTCTTTCCATTCTTCTCAAAACGAAGCAATGGTCAGAAAGATGCC TGATTAGTTTCTGGAAGTTAACTTTCGGTATATTATGGAATCGAAATACG AACATTTAATACATGATAACCCTATGGTAGGGTGTGTGATGAATTTTCTT TTGAAATACGTTATCCGAATAAATTAGATAAAAATATTTTTAAAAATTCC GTTTGCCCCACCTGTTTGTAAAATCAATTTTTATAGAAAGCCTTCCAAAG TGATAAATATGACAGTAAGCCATGGTTATTGCTATTGGCGGCTCTGAAAT AGAAAATTTAGGCTTGGTATAGTATCTTTCCAACTTTCATCCTCTTTCAA ACACTTATTTGTCTTCTCTTTTAGAAAGCAGACCTAACAACAAGAAGCGC AAAAACCGAAAAACGCCCTCCGTTTCAAACGAGCCGAAGCCGCCTCCGAA AAAGAAATCACCCTCGACATCCGCCTTTCCACCCATGTCAACATCAGACG TGATGTTTGTCGATGAGCCTGTTCTGATGGGCGGCGAGCTGGGAGACGAT GACGAAAGAGTCATTACAAGGTAGGGACTTCCTCCTGACTTAGTCCTTTA CATTTGATGTTTTGAATACGAAGCCAGGTCCCTTTTAATTAGTCTTGCAA AATTTTAGCTAGGGAAGATTGGGGGCCCCGGAGTAAAAAGAACTTTTCAG ACCTAACAAAAAGTCCCATTTACACTTCTTTTTTCCATACTGCTGTAGAT CTATCGTATCAAATCCGAGCAGCAGGCTACTACTATCCACCACTTCTTCA ACAAATATTCAAATGCTACAGCAGTTCACAAAACAAACTACTCAACAATT AACACAAATGCACAGTTAGGAAGCCTTCACACTTCACAACTCCGCCTCAC ACCCCTTCATCAATATGGTTTTGTTTTGTTTTGCTAGGTTGGAGAACGCT CAATTCGACACGCCCAACGGGATGGTCCCTGGCACTGGCCCTGGTGGCCC GACGGACGATATTGATGATGCTTTTGCACCGAGTGGTGGCATCGATCCGT CCTTGATGGGTGACTCACAACCGTGGAAGAACGAGGTCAAACCCCAGTTA CCTCCTCCCAACCAAATGGTCACTCAATCCATGTCTCAGGTGATGAGTCA ATCGATGGCACACATGGCAGCTGCGGTCAGTCAGCATCAACAGAACATGA ACAACGCACAATCGATGGGTCAAGCTATGATTCATCATCATCAACAGCAA CAACAACAGCAACAAGCGGCTAATCAGCAACAGCAGAATCATAATCAACA ACAACAGCAGCAACAAGTGAACAACGCACAGCAACAGAATCAGCAACAAC AACAACCTCAACAGCAAGGACAACCGCCACAACAACAACAAAATCAAAAT CCCAACCAACAGAATCAGCAAGTGGCTCAAATTAAAACTGAGGATCAAAA CTCGTAGAGAAAATGTTTACCGAAAGTAACCTCTCTTTAGAAGAACATTA GTTTTCCGTTTAAATCGAACAATGTCTCCCATTATTTTGACTCGAATTAA CTTGTAGCTTGAGTCATTATTGATGACATTCTTTTCTATGACTGTGTTTA AATCGTCGTAAGTGAGCTCAAATTTTGAAAAATATTGTCTACTGGTTTTT GCCTAAAATAAGCTCAATTTTTAACTCTTTGATGAAACTTTTGGCCCCTT CACGTCATTGTCCAACTTTGTCTTCCGCTGTATTTTGGCGTCCTAACATA CAAGTTTATTGTAGCAATATATTGATAACAATAATGATAATATTTTTAAA CCTTTTAAAATTTTGGTTTTTACTTTTCATTTTTATATGAATGTCACGTG AGCGTCTTGGTTATTTAATGTTATGTAGTAGTAATGCCCAATTTCTTTTA TTCGTCTATCGTTTATTTTTTATCTCAAACAATTAATTTTAATCCGTCTT TTGTCAACGAAGTGTATTTCCTTATAATGTTTTTTATAATATTTACTAGT ATTATTTTGTCTCCAATATTACGTGTATTGCTTTATTTTTGATTTGACCC TTTTTTAAAGTCAATTTTGTTTTCACTGGTAGATCAGCAATGACCTAAGA GATCAACAGATACTTGCTCAGGTTTGCTAATACACTATTTTTTAACCTTA CCGAAAATGTCTTCTTTGAAATATGTTTTAGAAACGTTTGCATATATTTT TCTGATGGTCTCTCTCTACCTTTGTTTGTCTTTCCTTGTTTTCGTGGAGA ATTATTTATTGAACTTGCATTAATCCCAAACATCTCAAATATAAATTAAG CAGTTTTTCGTTAGAAGATGAACCTAGCCTAAGTCATCTACGTTCATAAT TTTCAGTGGTACCGATATCTTTTTACCGATATCATTTTGCAATTCCATGG TTTTTTCATTTTTTCAACCAAATCTATCAATGTCATCAATGTATGTGTAA ATCCTCAGGCTTATTTTTAAAGATATATAATGGTAATTTTTACTTGATTA CTTTTTAATCTTTTTGTTTATTTTTTGTGAGAAATTGTGGTAAAAGAACT ATTTTCACAGTTTTTTTTTCTCAACATGTATTATATATTTTTTGAGTAAG TGTCATCTTTACTGCGCGCTAACAAAGGTGCAAGGAAAGAAAAATTGAAA GTCTTTTTCATTGATGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059444TCONS_00059444Clytia hemisphaericatranscript
TCONS_00059443TCONS_00059443Clytia hemisphaericatranscript
TCONS_00059442TCONS_00059442Clytia hemisphaericatranscript
TCONS_00059441TCONS_00059441Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059441-proteinTCONS_00059441-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_327supercontigscaffold_327:373289..381555 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
LDB2PREDICTED: LIM domain-binding protein 2 isoform X1 Homo Sapiens
LDB1LIM domain-binding protein 1 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
104.17 105.23 93.26 96.62 485.39 389.3 253.48 268.7 173.56 201.22 142.17 154.33 120.17 118.62 110.56 131.91 175 179.33 90.64 107.12 124.42 130.37 124.32 135.3 109.67 107.61 121.5 100.07 116.51 123.01