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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052904 ID=TCONS_00052904|Name=TCONS_00052904|organism=Clytia hemisphaerica|type=transcript|length=1223bp
GTACAAAAAAATCATTcctcaaagttctatttcaaaGCTCATTTATGGTA
GTGGCTAATTAAGTCTGAAAttcgactttctcaaaacatggtcatattgc
ataccaaaatATCACATATTTGATGGATTTGGAAAAACATTAATATCATA
CATCAAAAATGAAGTGAATAAAGGTTTTCACCCTTCAAAGCCGTTTTTTG
ACAAATACTTACTTCAGTATACTTcagtttgatttgatgatattcATCTG
TCCAGCTCGTTGAGCCCAACACGTGTAATTTGATCGAAAAGAGCATTTGA
TTCAGCCAATCTTGTTTGTCGCGACGTAGTGTGAGGTCCGTCGGGTATAG
AGCACAGAATATATCGAGTCGTTTCTTGGGGCCTATTTGTTTCACTTACT
ATAAATGCTGTAACTGCTACTGCCAAAAATGCATGCAACATaccatgaaa
actttgaaaatgatagtAAATATAGCAAGTTTCTGTTGTCTACCATCTTG
GTATTGTGGTCGGGCTTACTACTCAAGATTTTCAGAAGAATGTCCGTGAA
TTATAAGTTGGGAAGTAAAACCATACCTTCAACTTCGCAACAAGGGTCAC
GTGACGTTAAtaatgtaaacaaatatggtTTGGATAATTTatgcgagaaa
aaaaataaatactttgTGGTGGGGCAAGTGGTGAAAAGGTGCATCGGATT
GTGAAGTCGCTTTGCGTGGTGGtagaataaataaatattgaattaaGAAT
AATGAGTTTTAAAACATTGTCAGAATTTTGTTGTCAAACAATTGATGCTA
CAGCAATTGAAGAACCAAGAGTTCCGAAgttaattttcccaaaaaaatat
gTTCAACCGTTTACTGAAGAAGAACACAACATCAAAGACATCAAAAGCAA
AACTAAGCCAAAATTCAAACCTCCAAAAAAGTCGACACCAAAGAATAAGC
AGGCAGAGGCAAGTTTTAAGATCTAGTGATtcgctgtttttttttagtaa
tgaatagtgatttttttcattttaaggcttttttatgtGATCGTATTTTT
AAGTTATAGCTCCTAAAAAAATCCttgccatgaaattttttgtaattttt
ttatcagaaatttTAAGAAGAGCGGGAATCCATGAAAACTTACAATTACG
CTTTCTCTTTAGACACTGGATAACACGACGGACAAGAATACCAATTTGAA
GTCAAGAAAGAGAAACATCAAAG Run BLAST on NCBI transcript from alignment at scaffold_222:282127..283349+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052904 ID=TCONS_00052904|Name=TCONS_00052904|organism=Clytia hemisphaerica|type=transcript|length=1223bp|location=Sequence derived from alignment at scaffold_222:282127..283349+ (Clytia hemisphaerica)
GTACAAAAAAATCATTcctcaaagttctatttcaaaGCTCATTTATGGTA
GTGGCTAATTAAGTCTGAAAttcgactttctcaaaacatggtcatattgc
ataccaaaatATCACATATTTGATGGATTTGGAAAAACATTAATATCATA
CATCAAAAATGAAGTGAATAAAGGTTTTCACCCTTCAAAGCCGTTTTTTG
ACAAATACTTACTTCAGTATACTTcagtttgatttgatgatattcATCTG
TCCAGCTCGTTGAGCCCAACACGTGTAATTTGATCGAAAAGAGCATTTGA
TTCAGCCAATCTTGTTTGTCGCGACGTAGTGTGAGGTCCGTCGGGTATAG
AGCACAGAATATATCGAGTCGTTTCTTGGGGCCTATTTGTTTCACTTACT
ATAAATGCTGTAACTGCTACTGCCAAAAATGCATGCAACATaccatgaaa
actttgaaaatgatagtAAATATAGCAAGTTTCTGTTGTCTACCATCTTG
GTATTGTGGTCGGGCTTACTACTCAAGATTTTCAGAAGAATGTCCGTGAA
TTATAAGTTGGGAAGTAAAACCATACCTTCAACTTCGCAACAAGGGTCAC
GTGACGTTAAtaatgtaaacaaatatggtTTGGATAATTTatgcgagaaa
aaaaataaatactttgTGGTGGGGCAAGTGGTGAAAAGGTGCATCGGATT
GTGAAGTCGCTTTGCGTGGTGGtagaataaataaatattgaattaaGAAT
AATGAGTTTTAAAACATTGTCAGAATTTTGTTGTCAAACAATTGATGCTA
CAGCAATTGAAGAACCAAGAGTTCCGAAgttaattttcccaaaaaaatat
gTTCAACCGTTTACTGAAGAAGAACACAACATCAAAGACATCAAAAGCAA
AACTAAGCCAAAATTCAAACCTCCAAAAAAGTCGACACCAAAGAATAAGC
AGGCAGAGGCAAGTTTTAAGATCTAGTGATtcgctgtttttttttagtaa
tgaatagtgatttttttcattttaaggcttttttatgtGATCGTATTTTT
AAGTTATAGCTCCTAAAAAAATCCttgccatgaaattttttgtaattttt
ttatcagaaatttTAAGAAGAGCGGGAATCCATGAAAACTTACAATTACG
CTTTCTCTTTAGACACTGGATAACACGACGGACAAGAATACCAATTTGAA
GTCAAGAAAGAGAAACATCAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052904-exon-scaffold_222-1491911889:282127..283349 | TCONS_00052904-exon-scaffold_222-1491911889:282127..283349 | Clytia hemisphaerica | exon |
| TCONS_00052904-exon-scaffold_222-1510915933:282127..283349 | TCONS_00052904-exon-scaffold_222-1510915933:282127..283349 | Clytia hemisphaerica | exon |
| TCONS_00052904-exon-scaffold_222-1575043694:282127..283349 | TCONS_00052904-exon-scaffold_222-1575043694:282127..283349 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_222 | supercontig | scaffold_222:282127..283349 + |
Blast
The following BLAST results are available for this feature:
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