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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044506 ID=TCONS_00044506|Name=TCONS_00044506|organism=Clytia hemisphaerica|type=transcript|length=652bp
CACAACTGGAATTTTCACTTCAAGGTAACCGACGAAACGAAGGCAACGAC
TAATGTCCATTTTCGTTGGAGTGTGGTGCAGTCATATAAATCACCTAATT
CTCTGGGCCCCAACCTCGTTGCAGACCCCAACGTGAACAGCATTATAAAA
ATTAAGACCGTGATGATAGAGTTAGAAATTGAGAAGTTAGAATGGTTCTC
GTTCTCTGGTTCCTTAACGACGATCATGTTCAGGCTTTCTTTTCGAGTTC
TTTTATTTTCTCCTTCTTTCTTTTCCTTAGCTTNNNNNNNNNNNNNNTTT
TGTTTTGTTCTGCGATTGAAGTCTACAATGAGGTTTGGGTCTAAAATATT
TTCACTAGGCTCCCAAGTAGCCTGCGACAAGGGATATCCTTGCCACTTCA
CAAGATAACTCGTGATTCCAGATCGTTTTCTGGATTTCAGAATTCTTTCT
ACCCTATAAACCAGGTCTTCCTGTTCGATTTCCATTGTCGGATCGGGGAC
GTGTGGCATAGAATCTAACGGGATGCAATCTAACGGGACGTTACAAAATT
CGTCCTCTCCCTCGACCTCATTGTCCGGTCTTTCCCTGGGGGTGTACTTC
TTTATTCTGGAGGCATGGACATTTACTGGGACTCTCCTCCCCTCTATCTC
GA Run BLAST on NCBI transcript from alignment at sc0005693:10939..12092+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044506 ID=TCONS_00044506|Name=TCONS_00044506|organism=Clytia hemisphaerica|type=transcript|length=1154bp|location=Sequence derived from alignment at sc0005693:10939..12092+ (Clytia hemisphaerica)
CACAACTGGAATTTTCACTTCAAGGTAAGATTTTCGATGTTTTGGAGGCA
CACAAAAACTTCCCACAAAATAGGTCTCTCTCAGTTACTGCCTACgtata
taaaataattcaaaatgccgttatataaaaaaatctattaCCTAGTGCCT
GTGTTCCTGTCCCGATTATACCCTCGTTTCCTATTAGACGCGTAGGAAAA
AAATCGAATTTCTAagtctcaaaaatatttctagcaCTAGTGCAAAATTT
CTCAATTCCAATAAAAATTTCTCTTTGGGATAAGAACACACGGCGTGTGA
AGGATGAGGGTACGTGTCCGTATTACGACTATCTAacgcaaaattaaaaa
actcaaaaaaaaatttttcaaattagatTAAAGAAATAACTATACTTACA
CCACTGTGTCCCTTCTGTAGGTCTACCTTTGTGCTTCAAAAACCGCAAGT
AATCGTAATTGTTATTATATTTATAGGCAATGACTGCTCTGTATTTACTT
ATGTTGCTTTTCCTTTCATTGTTCAGGTAACCGACGAAACGAAGGCAACG
ACTAATGTCCATTTTCGTTGGAGTGTGGTGCAGTCATATAAATCACCTAA
TTCTCTGGGCCCCAACCTCGTTGCAGACCCCAACGTGAACAGCATTATAA
AAATTAAGACCGTGATGATAGAGTTAGAAATTGAGAAGTTAGAATGGTTC
TCGTTCTCTGGTTCCTTAACGACGATCATGTTCAGGCTTTCTTTTCGAGT
TCTTTTATTTTCTCCTTCTTTCTTTTCCTTAGCTTNNNNNNNNNNNNNNT
TTTGTTTTGTTCTGCGATTGAAGTCTACAATGAGGTTTGGGTCTAAAATA
TTTTCACTAGGCTCCCAAGTAGCCTGCGACAAGGGATATCCTTGCCACTT
CACAAGATAACTCGTGATTCCAGATCGTTTTCTGGATTTCAGAATTCTTT
CTACCCTATAAACCAGGTCTTCCTGTTCGATTTCCATTGTCGGATCGGGG
ACGTGTGGCATAGAATCTAACGGGATGCAATCTAACGGGACGTTACAAAA
TTCGTCCTCTCCCTCGACCTCATTGTCCGGTCTTTCCCTGGGGGTGTACT
TCTTTATTCTGGAGGCATGGACATTTACTGGGACTCTCCTCCCCTCTATC
TCGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044506-exon-sc0005693-1491911889:10939..10962 | TCONS_00044506-exon-sc0005693-1491911889:10939..10962 | Clytia hemisphaerica | exon |
| TCONS_00044506-exon-sc0005693-1510915933:10939..10962 | TCONS_00044506-exon-sc0005693-1510915933:10939..10962 | Clytia hemisphaerica | exon |
| TCONS_00044506-exon-sc0005693-1575043694:10939..10962 | TCONS_00044506-exon-sc0005693-1575043694:10939..10962 | Clytia hemisphaerica | exon |
| TCONS_00044506-exon-sc0005693-1491911889:11465..12092 | TCONS_00044506-exon-sc0005693-1491911889:11465..12092 | Clytia hemisphaerica | exon |
| TCONS_00044506-exon-sc0005693-1510915933:11465..12092 | TCONS_00044506-exon-sc0005693-1510915933:11465..12092 | Clytia hemisphaerica | exon |
| TCONS_00044506-exon-sc0005693-1575043694:11465..12092 | TCONS_00044506-exon-sc0005693-1575043694:11465..12092 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005693 | supercontig | sc0005693:10939..12092 + |
Blast
The following BLAST results are available for this feature:
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