XLOC_028132 (gene) - C. hemisphaerica

Overview
NameXLOC_028132
Unique NameXLOC_028132
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0005693:6098..12092+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_028132 ID=XLOC_028132|Name=XLOC_028132|organism=Clytia hemisphaerica|type=gene|length=5995bp|location=Sequence derived from alignment at sc0005693:6098..12092+ (Clytia hemisphaerica)
NNCGTTACGGGCGTGGAAGGTGGTTTCTGGGCGTAGTACAGAGGCTATAG AATCGCCTCTGTACACCCCTCCCCGCCCTGTTAAACAGGTTGGGAGCGGT TTCCCCTACTACAATTCAAATAAATATCTGGGATGACCAGGGCGTTTCCG ACTGAACCAGTACAATAGCAAATCCTATATAATAATCCTAAAAATACtat gaaaataaacattaaataaTCTGAACTCTAATGATAAATACTATTCCTAT AATCAACAAAATATAAGGTTAACTgtttaaataataattttttcaagaac ataTTTATCTTATGACCTAAGTAATATGAGGTATAATAAGGGAGGAGGGT GGACATTTCCCAATCAACATAACATGAACCATATCATTTCTACTCTACGG GGTCTAAATGACCCCAGAATAGTGTCTCTCTTTGTGCCAAGGCTAGGATA GAAATTGTCTGTTGTCTATGGTGATGGTTGATTGGAAGGGAGGGTGGAAA CCATGGTAGCAACTGCTGTTTTCTCGTGGGAAAGTTcttcgtttttgttt tcaaaatagttCATTTTGTTGTGTTGTTCGGTATTATTTTTGAATGTTGC TTGGCGGTATCTGATTGGTAGGTTCTTTTCAACCAATCGTGGTGACTGCA CAATGACTGTCCCGCGGGAAAGTTATTCATTGTTACTGAAAAACATATCA TTGTTGTTGTGTTGTTCGGCATTACTTGTAATGGGTACTTGGTGGTATTT GATTGGTAGATTCCTTTCAACCAATCGTTGTGGTTGTACGGAGAGTATAG TTTCTTTTTAGcagtaatattttttcattgtttcttgGATACCCGTGAAG ATGGATCGACGTTTTACACTACTTTTAATACCAATTAACGGGCGTTGGAA CGTCGTGTGGTCANCCTTGGTTCCAGTGAACGGGCGTTGGAACGCCGTGT GGCAATGCGTCAATTGTCACTCTACAAACATCGCAATGTGCCCCGGGTGT TTGCATCCAAAGCACTTCGAGGATAAAAATGGATCAGTCTTGGCCACCAG GTGTTGTGGCCGAGTTTGGCGCGGCTCCGAAGATATCGTCTGCTGCTATT GTCTTCCGGTAAGTGGTTTCTTTTCCTCTCTCTTCTTTCAGGGGTTTCGT CCATCGTCGGTCCTTCTGGGTTGGTTTAAGGTTTAGTCTTCGTTTTGGTA TTTCTGTTTCCCAGCCTGGCATCCAACTCCATTTCCACACTATTTCAATT ACTTTCACGGCCCTCCTCCTTTTTACCTATATCAATAGACTTCCCTCCCC CCTCTAGGTGAGATCTAGTCGAGGCTGATAGAAAAAGTACGTGTCTCATA GCTATCGCTCGTCTGTGAATTCCCAGTCAGGCTTTATTCTATTTATGTAG AACCTATctcattattttattatttttttttttttcaggcacACCAATTT TTAAATCGATGACGAGTTTCACACTTGGAATTTTCACCTCAAGGTAAGAT TTTCGATGTTTTGGAGGCACACAAAACTTCCCACAAAATAGGTCTCTCTC CGTTACTGTCTACGTgtataaaataattcaaaatgccgttatatcaaaaa aaaatctattaccTAGTGCCTGTGTTCCTGTCCCGATTATACCCTCGTTT CCTATTAGACGCGtaggaaaaaaatcgaattttttagtctcaaaaatatt tctagcaCTAGTGCAAAATTTCTCAATTCCAATAAAAAATTCTCTTTGGG ATAAGAACACACGGCGTGTGAAGTCTGAGGGTGCGTGTCCGTATTACGAC TCTCTAacgcaaaattaaaaaactcaaaaaaattcaaattggaTTAAAGA AATAGCTATACTTACACCTCTGTGTCCCTTCTGTAGGTCTACCTTTGAGC TTCGAAAACTGCAAGTAATTGTGATTATTAATACATTTATAGGCAATGAT TTTTCTGTATTTActaatgttgttttttattttattttattgttcaGGTA ACCGATGAAACGAAGGCAACGACTAACGTCCATTTCGTTGGAGTGTGGTG CAGTCATATAAATAACCTAATTCTCTGGGCCCCAACCTCGCTGCAGACCC CAACGTGAACAGCATTATAAAAACTAAGACCGTGATGATAGAGTTAGAAA TTGAGANACACCTTTTTAagcgtagtcgcgcggtcaggcgcgtacAAATT TATTATTTGATTTACCCCCTTagactcgatccaatccttttttacacttt ttggacctaccccggtggaggtcctataaattaaccgttgtatgttcgtt cgtccgttcgtccgttcgttctttagttactagcttttctcgatattggc tcattagttttttctaattttttgcacaaagatgcataactataaaccct cgaatgtgacggagcccgattttcgaaaaaaaaaatttttgggtaaattt aggccaaaaaacggctaaaaacgtttttggacttggtgtgaaaaattgga tcattaattttttctgattttttgcatgaaagtaggataccatcataggt aaaagatggctcaagcatatttttgcaaaaaaattttggtggctcaaaaa cgcatgtttatctataagaatcactattaataagcatacatcaatgttct tagtcaaattacccaaatttttttatgagatagatgttttttttgctcac aagggctgacttttaaagaatatgtgtgtttagacatgaaattttggttg cttggcgggtttttatagaaaaactggccaaattcgatattttttataag tacattatcaattacttaggtataaacttttctcgagattagctctttca ttctttatgattttttgcacaaagatgcataactataaaccctcgaatgt gacggagctcgacttttggagaaaaaaatttggggtaaatttcagctaaa aaacggctaaaaaaagggactttgtgaaatattggatcattgtttttttc tgactttttgtatgaaagtaggtaaaagatggctcaagcagatttttgta aaaaaaataatttttcagctcaaaaaacgcatctttatctataagaatca ctattaataagcatacatcaatgcaCTTAAAATTAccgaatttttttatg agatatgtttttttgctcacgaagtcttgaatatgaaagaatatgtAATA ATGCGATGCCGGCCCACGTCTAGGTCGACACCACACTATTAACGGGTGGA GGACTAGTCCAGACATCAAACAGAGAAGGGGAGACTGTACGTATTTCTGT ACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTAAGTGGTTTCTTTTCCT CTCTCTTCTTTCAGGGGTTTCGTCCATCGTCGGTCCTTCTGGGTTGGTTT AAGGTTTAGTCTTCGTTTTGGTATTTCTGTTTCCCAGCCTGGCATCCAAC TCCATTTCCACACTATTTCAATTACTTTCACGGCCCTCCTCCTTTTTACC TATATCAATAGACTTCCCTCCCCCCTCTAGGTGGGATCTAGTCGAGGCTG ATAGAAAAAGTACGTGTCTCATAGCTATCGCATGTCTATGAATTCCCAGT CAGGCCCTATTCTATTTCTGTAGAACCTAtctcattattattattttttt tctttttcaggcgCACCAATTTTTAAATCGGTGATGAGTGTCACAACTGG AATTTTCACTTCAAGGTAAGATTTTCGATGTTTTGGAGGCACACAAAAAC TTCCCACAAAATAGGTCTCTCTCAGTTACTGCCTACgtatataaaataat tcaaaatgccgttatataaaaaaatctattaCCTAGTGCCTGTGTTCCTG TCCCGATTATACCCTCGTTTCCTATTAGACGCGTAGGAAAAAAATCGAAT TTCTAagtctcaaaaatatttctagcaCTAGTGCAAAATTTCTCAATTCC AATAAAAATTTCTCTTTGGGATAAGAACACACGGCGTGTGAAGGATGAGG GTACGTGTCCGTATTACGACTATCTAacgcaaaattaaaaaactcaaaaa aaaatttttcaaattagatTAAAGAAATAACTATACTTACACCACTGTGT CCCTTCTGTAGGTCTACCTTTGTGCTTCAAAAACCGCAAGTAATCGTAAT TGTTATTATATTTATAGGCAATGACTGCTCTGTATTTACTTATGTTGCTT TTCCTTTCATTGTTCAGGTAACCGACGAAACGAAGGCAACGACTAATGTC CATTTTCGTTGGAGTGTGGTGCAGTCATATAAATCACCTAATTCTCTGGG CCCCAACCTCGTTGCAGACCCCAACGTGAACAGCATTATAAAAATTAAGA CCGTGATGATAGAGTTAGAAATTGAGAAGTTAGAATGGTTCTCGTTCTCT GGTTCCTTAACGACGATCATGTTCAGGCTTTCTTTTCGAGTTCTTTTATT TTCTCCTTCTTTCTTTTCCTTAGCTTNNNNNNNNNNNNNNTTTTGTTTTG TTCTGCGATTGAAGTCTACAATGAGGTTTGGGTCTAAAATATTTTCACTA GGCTCCCAAGTAGCCTGCGACAAGGGATATCCTTGCCACTTCACAAGATA ACTCGTGATTCCAGATCGTTTTCTGGATTTCAGAATTCTTTCTACCCTAT AAACCAGGTCTTCCTGTTCGATTTCCATTGTCGGATCGGGGACGTGTGGC ATAGAATCTAACGGGATGCAATCTAACGGGACGTTACAAAATTCGTCCTC TCCCTCGACCTCATTGTCCGGTCTTTCCCTGGGGGTGTACTTCTTTATTC TGGAGGCATGGACATTTACTGGGACTCTCCTCCCCTCTATCTCGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00044504TCONS_00044504Clytia hemisphaericatranscript
TCONS_00044505TCONS_00044505Clytia hemisphaericatranscript
TCONS_00044506TCONS_00044506Clytia hemisphaericatranscript
TCONS_00044507TCONS_00044507Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005693supercontigsc0005693:6098..12092 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.32 0.4 1.02 0.19 6.87 7.98 29.61 37.31 0.95 2.27 6.87 6.31 10.66 9.83 1.86 6.25 5.29 5.47 0.49 0.9 1.97 2.09 1.08 1.54 14.26 16.3 0.96 0.32 0.58 0.58