TCONS_00069383-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069383-protein
Unique NameTCONS_00069383-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length236

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069383-protein ID=TCONS_00069383-protein|Name=TCONS_00069383-protein|organism=Clytia hemisphaerica|type=polypeptide|length=236bp
XGVDFLEENDTFLTDDNSLTCHLFWHQTVNLTELGHYDRVLKLYDDKILP
TFKQTSNPFNLNDGVQALQRLEFEGINVGDRWEELYSVYKPMSNSNELVY
DDMHLTAAMIKSKTGRESKSNFFESMDDHLNKGLDTTYEDVGKRIGFPFA
KGIAAYCEDNFEEACNLFIPVYKDIWELGGSKAQQDIFNQYVINACVRSP
NQFHRRMARSLLHERKLFRPNSLLTDRVLAKLDVDH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043236XLOC_043236Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069383TCONS_00069383Clytia hemisphaericatranscript
Blast
[Close]
BLAST of TCONS_00069383-protein vs. Swiss-Prot (Human)
Match: TTC38 (Tetratricopeptide repeat protein 38 OS=Homo sapiens GN=TTC38 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.857e-42
Identity = 71/235 (30.21%), Postives = 127/235 (54.04%), Query Frame = 0 
Query:    2 GVDFLEENDTFLTDDNSLTCHLFWHQTVNLTELGHYDRVLKLYDDKILPTFKQTSNPFNLNDGVQALQRLEFEGINVGDRWEELYSVYKPMSNSNELVYDDMHLTAAMIKSKTGRESKSNFFESMDDHLNKGLDTTYEDVGKRIGFPFAKGIAAYCEDNFEEACNLFIPVYKDIWELGGSKAQQDIFNQYVINACVRSPNQFHRRMARSLLHERKLFRPNSLLTDRVLAKLDVDH 236
            G++F++ ++TF  D + L CH +WH  + L E G Y+  L +YD  ILP+ +      ++ D    L RL+ EG++VG RW+++  V +  S  + L+++D H   A + +   + ++     ++ D      +     + + +G P  + +    + N +    L +P+   I +LGGS AQ+D+FNQ +I+A +   +  H+ +ARSLL ER   +PNS LT+R++ K    H
Sbjct:  233 GLEFMQHSETFWKDSDMLACHNYWHWALYLIEKGEYEAALTIYDTHILPSLQANDAMLDVVDSCSMLYRLQMEGVSVGQRWQDVLPVARKHSRDHILLFNDAHFLMASLGAHDPQTTQ-ELLTTLRDASESPGENCQHLLARDVGLPLCQALVEAEDGNPDRVLELLLPIRYRIVQLGGSNAQRDVFNQLLIHAALNCTSSVHKNVARSLLMERDALKPNSPLTERLIRKAATVH 466
The following BLAST results are available for this feature:
BLAST of TCONS_00069383-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC386.857e-4230.21Tetratricopeptide repeat protein 38 OS=Homo sapien... [more]
back to top